© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5935 |
| Gene name | |
| Location | Contig_612:4092..5629 |
| Strand | - |
| Gene length (bp) | 1537 |
| Transcript length (bp) | 1401 |
| Coding sequence length (bp) | 1401 |
| Protein length (aa) | 467 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01494 | FAD_binding_3 | FAD binding domain | 2.1E-12 | 171 | 375 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P86491|6HN3M_PSEFL | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | 53 | 389 | 3.0E-17 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 1 | 406 | 1.0E-13 |
| sp|P23262|NHG1_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 | 138 | 406 | 1.0E-13 |
| sp|Q40412|ABA2_NICPL | Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 | 1 | 373 | 4.0E-13 |
| sp|Q88FY2|6HN3M_PSEPK | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 | 63 | 389 | 2.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P86491|6HN3M_PSEFL | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1 | 53 | 389 | 3.0E-17 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 1 | 406 | 1.0E-13 |
| sp|P23262|NHG1_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4 | 138 | 406 | 1.0E-13 |
| sp|Q40412|ABA2_NICPL | Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1 | 1 | 373 | 4.0E-13 |
| sp|Q88FY2|6HN3M_PSEPK | 6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1 | 63 | 389 | 2.0E-11 |
| sp|O81360|ABA2_PRUAR | Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1 | 1 | 366 | 2.0E-10 |
| sp|Q96375|ABA2_CAPAN | Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1 | 1 | 366 | 5.0E-10 |
| sp|Q9FGC7|ZEP_ARATH | Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana GN=ZEP PE=1 SV=1 | 2 | 403 | 1.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0071949 | FAD binding | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| Orthofinder run ID | 4 |
| Orthogroup | 4536 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5935 MKIVIVGAGISGCGIYLLLKKHLPKPLSAEPHDITIYEAYDTDKDTTASARGQGPTHSSTLVVGGGLGVGANGLN VLKRLDEDILRDVVSGGYVVPTMKMKTKGGTVLARVQPCGNGDGKSDNGMNMVASSRHWLWRCLRTRVPDDAIVT KTVTQVVANGEGRNIVQFADGTTVEADMVIGADGLKSLTKNALFPEAESGPFPPIYEGLVGVGGFIPSSEVRHLV EKGTMNCVFGGNGFFGYFFADSAKSDPNRESPFHVSEPGESLGWWSTYSAEQCPTPETLDPEAVTRQLRERHGSW KDPVVQKVLETVQIKSMYPTWTVPPLPTWERNGVVLVGDAAHALPPTSGQGSSQSLEDAEALTLFLCHHLRRAYR EHRTDVASRKELISMAAKQYMELRLPRVTKMLHEAQSMQSSKRNMTVVQEYAMYLIMWIMGYFPSLMAKPLKAVI EYNVAEEVKKILGKTD* |
| Coding | >Ophun1|5935 ATGAAGATCGTCATCGTCGGAGCGGGCATCTCCGGGTGCGGCATTTATCTGCTGCTGAAGAAGCACTTGCCCAAG CCCCTGTCGGCAGAGCCGCACGACATCACCATCTACGAAGCCTACGACACGGACAAGGACACGACTGCGTCGGCT CGCGGCCAGGGTCCAACCCATTCGTCGACGCTCGTGGTCGGCGGTGGCCTGGGCGTGGGCGCCAATGGGCTCAAC GTACTGAAGCGCCTCGACGAGGATATCCTCCGCGACGTCGTCAGCGGCGGATATGTCGTGCCGACGATGAAGATG AAGACCAAGGGGGGTACGGTACTCGCTCGGGTGCAGCCGTGCGGAAACGGGGACGGCAAGTCGGACAACGGCATG AACATGGTTGCCAGCAGTCGTCACTGGCTCTGGAGATGCCTTCGCACCCGAGTACCGGACGACGCCATCGTGACT AAAACGGTGACCCAGGTGGTGGCCAACGGCGAGGGTCGCAACATCGTCCAGTTTGCCGATGGGACCACGGTCGAG GCCGACATGGTCATTGGCGCCGACGGCCTCAAGAGTCTAACCAAGAATGCCTTGTTTCCAGAGGCAGAAAGCGGT CCGTTTCCGCCCATCTACGAAGGTCTGGTCGGCGTTGGTGGCTTCATCCCCTCGAGCGAGGTGAGGCATCTGGTA GAAAAGGGTACGATGAACTGTGTCTTTGGCGGCAACGGCTTCTTTGGCTACTTCTTCGCCGACAGCGCAAAGTCG GACCCGAATCGCGAGTCGCCCTTTCACGTGTCGGAGCCCGGTGAAAGCCTCGGCTGGTGGTCGACGTACTCGGCC GAGCAGTGTCCGACGCCGGAGACGCTCGACCCGGAAGCCGTAACCCGACAGCTGCGGGAGCGGCACGGGAGTTGG AAGGACCCCGTGGTGCAAAAGGTGCTGGAGACGGTGCAGATCAAGAGCATGTATCCGACATGGACGGTGCCGCCG TTGCCGACGTGGGAGCGCAACGGCGTCGTCCTCGTTGGCGACGCGGCCCATGCCTTGCCCCCGACGTCGGGCCAG GGGTCGTCGCAGTCGCTCGAGGACGCCGAGGCGCTGACCCTCTTCCTCTGCCACCATCTGCGCAGGGCGTACCGG GAACACAGAACCGACGTTGCCAGCCGCAAGGAACTCATCAGCATGGCAGCGAAGCAGTACATGGAGCTGCGGCTG CCCCGCGTTACCAAGATGCTGCATGAGGCTCAGTCGATGCAGAGCTCGAAGCGGAACATGACGGTGGTGCAGGAA TATGCCATGTACTTGATCATGTGGATCATGGGTTACTTTCCCAGCCTCATGGCTAAGCCGTTGAAAGCGGTGATT GAGTATAACGTGGCGGAGGAGGTCAAGAAGATTCTAGGCAAGACGGACTGA |
| Transcript | >Ophun1|5935 ATGAAGATCGTCATCGTCGGAGCGGGCATCTCCGGGTGCGGCATTTATCTGCTGCTGAAGAAGCACTTGCCCAAG CCCCTGTCGGCAGAGCCGCACGACATCACCATCTACGAAGCCTACGACACGGACAAGGACACGACTGCGTCGGCT CGCGGCCAGGGTCCAACCCATTCGTCGACGCTCGTGGTCGGCGGTGGCCTGGGCGTGGGCGCCAATGGGCTCAAC GTACTGAAGCGCCTCGACGAGGATATCCTCCGCGACGTCGTCAGCGGCGGATATGTCGTGCCGACGATGAAGATG AAGACCAAGGGGGGTACGGTACTCGCTCGGGTGCAGCCGTGCGGAAACGGGGACGGCAAGTCGGACAACGGCATG AACATGGTTGCCAGCAGTCGTCACTGGCTCTGGAGATGCCTTCGCACCCGAGTACCGGACGACGCCATCGTGACT AAAACGGTGACCCAGGTGGTGGCCAACGGCGAGGGTCGCAACATCGTCCAGTTTGCCGATGGGACCACGGTCGAG GCCGACATGGTCATTGGCGCCGACGGCCTCAAGAGTCTAACCAAGAATGCCTTGTTTCCAGAGGCAGAAAGCGGT CCGTTTCCGCCCATCTACGAAGGTCTGGTCGGCGTTGGTGGCTTCATCCCCTCGAGCGAGGTGAGGCATCTGGTA GAAAAGGGTACGATGAACTGTGTCTTTGGCGGCAACGGCTTCTTTGGCTACTTCTTCGCCGACAGCGCAAAGTCG GACCCGAATCGCGAGTCGCCCTTTCACGTGTCGGAGCCCGGTGAAAGCCTCGGCTGGTGGTCGACGTACTCGGCC GAGCAGTGTCCGACGCCGGAGACGCTCGACCCGGAAGCCGTAACCCGACAGCTGCGGGAGCGGCACGGGAGTTGG AAGGACCCCGTGGTGCAAAAGGTGCTGGAGACGGTGCAGATCAAGAGCATGTATCCGACATGGACGGTGCCGCCG TTGCCGACGTGGGAGCGCAACGGCGTCGTCCTCGTTGGCGACGCGGCCCATGCCTTGCCCCCGACGTCGGGCCAG GGGTCGTCGCAGTCGCTCGAGGACGCCGAGGCGCTGACCCTCTTCCTCTGCCACCATCTGCGCAGGGCGTACCGG GAACACAGAACCGACGTTGCCAGCCGCAAGGAACTCATCAGCATGGCAGCGAAGCAGTACATGGAGCTGCGGCTG CCCCGCGTTACCAAGATGCTGCATGAGGCTCAGTCGATGCAGAGCTCGAAGCGGAACATGACGGTGGTGCAGGAA TATGCCATGTACTTGATCATGTGGATCATGGGTTACTTTCCCAGCCTCATGGCTAAGCCGTTGAAAGCGGTGATT GAGTATAACGTGGCGGAGGAGGTCAAGAAGATTCTAGGCAAGACGGACTGA |
| Gene | >Ophun1|5935 ATGAAGATCGTCATCGTCGGAGCGGGCATCTCCGGGTGCGGCATTTATCTGCTGCTGAAGAAGCACTTGCCCAAG CCCCTGTCGGCAGAGCCGCACGACATCACCATCTACGAAGCCTACGACACGGACAAGGACACGACTGCGTCGGCT CGCGGCCAGGGTCCAACCCATTCGTCGACGCTCGTGGTCGGCGGTGGCCTGGGCGTGGGCGCCAATGGGCTCAAC GTACTGAAGCGCCTCGACGAGGATATCCTCCGCGACGTCGTCAGCGGCGGATATGTCGTGCCGACGATGAAGATG AAGACCAAGGGGGGTACGGTACTCGCTCGGGTGCAGCCGTGCGGAAACGGGGACGGCAAGTCGGACAACGGCATG AACATGGTTGCCAGCAGTCGTCACTGGCTCTGGAGATGCCTTCGCACCCGAGTACCGGACGACGCCATCGTGACT AAAACGGTGACCCAGGTGGTGGCCAACGGCGAGGGTCGCAACATCGTCCAGTTTGCCGATGGGACCACGGTCGAG GCCGACATGGTCATTGGCGCCGACGGCCTCAAGAGTCTAACCAAGAATGCCTTGTTTCCAGAGGCAGAAAGCGGT CCGTTTCCGCCCATCTACGAGTGAGCGCGCGTTGTCATCGTCGTAGACGCGCAGGACGCCGAGGCTGACGCTTCG GATGCAGAGGTCTGGTCGGCGTTGGTGGCTTCATCCCCTCGAGCGAGGTGAGGCATCTGGTAGAAAAGGGTACGA TGAACTGTGTCTTTGGCGGCAACGGCTTCTTTGGCTACTTCTTCGCCGACAGCGCAAAGTCGGACCCGAATCGCG AGTCGCCCTTTCACGTGTCGGAGCCCGGTGAAAGCCTCGGCTGGTGGTCGACGTACTCGGCCGAGCAGTGTCCGA CGCCGGAGACGCTCGACCCGGAAGCCGTAACCCGACAGCTGCGGGAGCGGCACGGGAGTTGGAAGGACCCCGTGG TGCAAAAGGTGCTGGAGACGGTGCAGATCAAGAGCATGTATCCGACATGGACGGTGCCGCCGTTGCCGACGTGGG AGCGCAACGGCGTCGTCCTCGTTGGCGACGCGGCCCATGCCTTGCCCCCGACGTCGGGCCAGGGGTCGTCGCAGT CGCTCGAGGACGCCGAGGCGCTGACCCTCTTCCTCTGCCACCATCTGCGCAGGGCGTACCGGGAACACAGAACCG ACGTTGCCAGCCGCAAGGAACTCATCAGCATGGCAGCGAAGCAGTACATGGAGCTGCGGCTGCCCCGCGTTACCA AGATGCTGCATGAGGCTCAGTCGATGCAGAGCTCGAAGCGGAACATGACGGTGGTGCAGGAATATGCCATGTACT TGATCATGTGGATCATGGGTACGTTCGTAGGCTTTCCAGGAACAATAACCGTCGCAACGAGGCAGAGCGAGGACG TGGCTGATCCAGCACAGGTTACTTTCCCAGCCTCATGGCTAAGCCGTTGAAAGCGGTGATTGAGTATAACGTGGC GGAGGAGGTCAAGAAGATTCTAGGCAAGACGGACTGA |