Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5924
Gene name
LocationContig_610:8583..10035
Strand-
Gene length (bp)1452
Transcript length (bp)1329
Coding sequence length (bp)1329
Protein length (aa) 443

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10436 BCDHK_Adom3 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 4.3E-74 23 259
PF02518 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1.7E-12 305 432

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9P6P9|PDK_SCHPO [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkp1 PE=3 SV=1 9 442 9.0E-136
sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1 159 441 2.0E-78
sp|Q922H2|PDK3_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=1 SV=1 181 438 1.0E-69
sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1 181 438 2.0E-68
sp|P91622|PDK_DROME [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2 179 441 6.0E-68
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6P9|PDK_SCHPO [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkp1 PE=3 SV=1 9 442 9.0E-136
sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1 159 441 2.0E-78
sp|Q922H2|PDK3_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=1 SV=1 181 438 1.0E-69
sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1 181 438 2.0E-68
sp|P91622|PDK_DROME [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2 179 441 6.0E-68
sp|O88345|PDK4_ICTTR [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Ictidomys tridecemlineatus GN=PDK4 PE=2 SV=1 172 438 2.0E-65
sp|Q16654|PDK4_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1 172 438 1.0E-64
sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1 172 438 7.0E-64
sp|Q9JK42|PDK2_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=2 169 438 8.0E-64
sp|Q64536|PDK2_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1 169 438 1.0E-63
sp|O70571|PDK4_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Mus musculus GN=Pdk4 PE=1 SV=1 172 438 1.0E-63
sp|Q15119|PDK2_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2 169 438 2.0E-63
sp|O54937|PDK4_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rattus norvegicus GN=Pdk4 PE=1 SV=1 172 438 7.0E-63
sp|O02623|PDK_ASCSU [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1 180 434 5.0E-61
sp|Q15118|PDK1_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1 181 438 1.0E-59
sp|Q63065|PDK1_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1 181 438 2.0E-59
sp|Q8BFP9|PDK1_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=1 SV=2 181 438 3.0E-59
sp|Q02332|PDHK2_CAEEL Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=3 SV=1 180 432 9.0E-59
sp|Q2KJG8|BCKD_BOVIN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Bos taurus GN=BCKDK PE=2 SV=1 169 439 2.0E-47
sp|O55028|BCKD_MOUSE [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Mus musculus GN=Bckdk PE=1 SV=1 161 439 2.0E-47
sp|Q00972|BCKD_RAT [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus GN=Bckdk PE=1 SV=2 169 439 9.0E-47
sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2 169 439 1.0E-46
sp|P40530|PDK1_YEAST [Pyruvate dehydrogenase (acetyl-transferring)] kinase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PKP1 PE=1 SV=1 171 438 6.0E-18
sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1 9 104 3.0E-17
sp|O02623|PDK_ASCSU [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1 6 115 8.0E-11
sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1 13 93 4.0E-10
sp|Q64536|PDK2_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1 13 93 6.0E-09
sp|Q15119|PDK2_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2 13 93 6.0E-09
sp|O70571|PDK4_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Mus musculus GN=Pdk4 PE=1 SV=1 13 93 8.0E-09
sp|Q9JK42|PDK2_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=2 13 93 8.0E-09
sp|O88345|PDK4_ICTTR [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Ictidomys tridecemlineatus GN=PDK4 PE=2 SV=1 13 93 9.0E-09
sp|Q8BFP9|PDK1_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=1 SV=2 16 90 1.0E-08
sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1 3 92 1.0E-08
sp|Q15118|PDK1_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1 16 90 2.0E-08
sp|Q63065|PDK1_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1 16 90 2.0E-08
sp|Q922H2|PDK3_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=1 SV=1 13 92 2.0E-08
sp|O54937|PDK4_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rattus norvegicus GN=Pdk4 PE=1 SV=1 13 93 2.0E-08
sp|Q16654|PDK4_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1 13 93 3.0E-08
sp|Q02332|PDHK2_CAEEL Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=3 SV=1 9 115 9.0E-08
sp|P91622|PDK_DROME [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2 16 128 5.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5924
MSWKATDRLMDTIRHYANFPATGVSLRQMVQFGDKPSTGTLFRASQFLAEELPIRLAHRVQELDDLPDGLNDMPS
VQKVKEWYAQSFEEITQLPRPTLSSNVRDRLTNRRQVVQKLSQATPNPSIDEGDASGWGGLHSTATNSNNSSSSN
GKARSISRRYFAPVDDSGDWPPELQMYNQRFAQTLNKIKRRHDGVVTTMAQGILEYKRRRQRMQINGTVQSFLDR
FYMSRIGIRMLIGQHIALTDQSHHRDPAYVGVICTKTNVHDLAQEAIENARFVCEDHYGLFEAPRIQLVCNPNLD
FMYVPGHLSHMLFETLKNSLRAVVETHGMDKQEFPVTKVIVAEGKEDITVKISDEGGGIPRSAIPLVWTYMYTTV
DRTPNLDPDFDKSDFKAPMAGFGYGLPISRLYARYFGGDLKLISMEGYGTDVYLHLNRLSSSSEPLQ*
Coding >Ophun1|5924
ATGTCGTGGAAAGCGACGGATCGGCTGATGGACACGATCCGCCACTATGCCAACTTCCCCGCCACCGGCGTCAGC
CTGCGCCAGATGGTGCAGTTTGGCGACAAACCATCGACTGGCACCCTCTTCCGCGCCTCGCAGTTCCTGGCTGAA
GAGCTTCCCATACGACTGGCTCACCGCGTCCAGGAGCTCGACGACCTCCCCGATGGCCTCAACGACATGCCCTCG
GTGCAAAAGGTCAAGGAGTGGTACGCCCAGTCGTTCGAAGAGATTACGCAGCTGCCCCGGCCTACGCTCTCCAGC
AATGTCCGCGACCGGCTCACCAATCGCCGCCAGGTGGTCCAGAAGCTGTCGCAGGCGACGCCCAATCCTTCTATA
GACGAGGGCGACGCATCGGGCTGGGGCGGTCTGCACTCCACCGCTACCAACAGTAACAACAGCTCCAGTAGCAAT
GGCAAGGCGCGCTCCATCTCGAGACGCTACTTCGCCCCCGTCGACGACTCTGGCGATTGGCCCCCCGAGCTGCAA
ATGTACAACCAGCGCTTCGCCCAGACGCTCAACAAGATCAAGCGCCGCCACGACGGAGTCGTCACCACCATGGCC
CAGGGCATCCTCGAGTACAAGCGGAGACGGCAGCGGATGCAAATCAACGGCACCGTTCAGTCCTTCCTCGACCGC
TTCTACATGTCCCGCATCGGCATCCGTATGCTCATCGGCCAGCACATTGCCCTGACGGATCAGAGCCACCACCGC
GACCCGGCCTACGTCGGCGTCATCTGCACCAAGACAAACGTCCACGACCTGGCGCAAGAGGCCATCGAAAACGCC
CGCTTCGTCTGCGAGGACCACTACGGCCTCTTTGAGGCGCCACGTATCCAGCTCGTCTGCAACCCCAACCTCGAC
TTCATGTACGTGCCCGGCCACCTGTCGCACATGCTCTTCGAGACGCTCAAGAACTCGCTGCGGGCTGTCGTCGAG
ACGCACGGCATGGACAAGCAGGAGTTTCCCGTGACAAAGGTCATCGTCGCCGAGGGAAAGGAGGACATCACCGTC
AAGATCTCGGACGAGGGCGGCGGCATCCCACGGAGCGCCATCCCTCTCGTCTGGACCTACATGTACACCACCGTC
GACCGTACCCCGAACCTGGACCCGGATTTCGACAAGAGTGACTTTAAGGCGCCCATGGCTGGCTTCGGCTACGGC
CTGCCCATTTCGCGACTGTATGCGCGATATTTTGGCGGCGATTTGAAGTTGATTAGCATGGAGGGGTACGGCACT
GACGTCTATCTGCACCTCAACCGCCTCTCCTCCTCCTCCGAGCCTCTGCAATAA
Transcript >Ophun1|5924
ATGTCGTGGAAAGCGACGGATCGGCTGATGGACACGATCCGCCACTATGCCAACTTCCCCGCCACCGGCGTCAGC
CTGCGCCAGATGGTGCAGTTTGGCGACAAACCATCGACTGGCACCCTCTTCCGCGCCTCGCAGTTCCTGGCTGAA
GAGCTTCCCATACGACTGGCTCACCGCGTCCAGGAGCTCGACGACCTCCCCGATGGCCTCAACGACATGCCCTCG
GTGCAAAAGGTCAAGGAGTGGTACGCCCAGTCGTTCGAAGAGATTACGCAGCTGCCCCGGCCTACGCTCTCCAGC
AATGTCCGCGACCGGCTCACCAATCGCCGCCAGGTGGTCCAGAAGCTGTCGCAGGCGACGCCCAATCCTTCTATA
GACGAGGGCGACGCATCGGGCTGGGGCGGTCTGCACTCCACCGCTACCAACAGTAACAACAGCTCCAGTAGCAAT
GGCAAGGCGCGCTCCATCTCGAGACGCTACTTCGCCCCCGTCGACGACTCTGGCGATTGGCCCCCCGAGCTGCAA
ATGTACAACCAGCGCTTCGCCCAGACGCTCAACAAGATCAAGCGCCGCCACGACGGAGTCGTCACCACCATGGCC
CAGGGCATCCTCGAGTACAAGCGGAGACGGCAGCGGATGCAAATCAACGGCACCGTTCAGTCCTTCCTCGACCGC
TTCTACATGTCCCGCATCGGCATCCGTATGCTCATCGGCCAGCACATTGCCCTGACGGATCAGAGCCACCACCGC
GACCCGGCCTACGTCGGCGTCATCTGCACCAAGACAAACGTCCACGACCTGGCGCAAGAGGCCATCGAAAACGCC
CGCTTCGTCTGCGAGGACCACTACGGCCTCTTTGAGGCGCCACGTATCCAGCTCGTCTGCAACCCCAACCTCGAC
TTCATGTACGTGCCCGGCCACCTGTCGCACATGCTCTTCGAGACGCTCAAGAACTCGCTGCGGGCTGTCGTCGAG
ACGCACGGCATGGACAAGCAGGAGTTTCCCGTGACAAAGGTCATCGTCGCCGAGGGAAAGGAGGACATCACCGTC
AAGATCTCGGACGAGGGCGGCGGCATCCCACGGAGCGCCATCCCTCTCGTCTGGACCTACATGTACACCACCGTC
GACCGTACCCCGAACCTGGACCCGGATTTCGACAAGAGTGACTTTAAGGCGCCCATGGCTGGCTTCGGCTACGGC
CTGCCCATTTCGCGACTGTATGCGCGATATTTTGGCGGCGATTTGAAGTTGATTAGCATGGAGGGGTACGGCACT
GACGTCTATCTGCACCTCAACCGCCTCTCCTCCTCCTCCGAGCCTCTGCAATAA
Gene >Ophun1|5924
ATGTCGTGGAAAGCGACGGATCGGCTGATGGACACGATCCGCCACTATGCCAACTTCCCCGCCACCGGCGTCAGC
CTGCGCCAGATGGTGCAGTTTGGCGACAAACCATCGACTGGTGCGCCTGCTCTTGCTGCTCTCTTCGCTCTTCAG
TGAGACTGATGCGTCTTGTCATATACAGGCACCCTCTTCCGCGCCTCGCAGTTCCTGGCTGAAGAGCTTCCCATA
CGACTGGCTCACCGCGTCCAGGAGCTCGACGACCTCCCCGATGGCCTCAACGACATGCCCTCGGTGCAAAAGGTC
AAGGAGTGGTACGCCCAGTCGTTCGAAGAGATTACGCAGCTGCCCCGGCCTACGCTCTCCAGCAATGTCCGCGAC
CGGCTCACCAATCGCCGCCAGGTGGTCCAGAAGCTGTCGCAGGCGACGCCCAATCCTTCTATAGACGAGGGCGAC
GCATCGGGCTGGGGCGGTCTGCACTCCACCGCTACCAACAGTAACAACAGCTCCAGTAGCAATGGCAAGGCGCGC
TCCATCTCGAGACGCTACTTCGCCCCCGTCGACGACTCTGGCGATTGGCCCCCCGAGCTGCAAATGTACAACCAG
CGCTTCGCCCAGACGCTCAACAAGATCAAGCGCCGCCACGACGGAGTCGTCACCACCATGGCCCAGGGCATCCTC
GAGTACAAGCGGAGACGGCAGCGGATGCAAATCAACGGCACCGTTCAGTCCTTCCTCGACCGCTTCTACATGTCC
CGCATCGGCATCCGTATGCTCATCGGCCAGCACATTGCCCTGACGGATCAGAGCCACCACCGCGACCCGGCCTAC
GTCGGCGTCATCTGCACCAAGACAAACGTCCACGACCTGGCGCAAGAGGCCATCGAAAACGCCCGCTTCGTCTGC
GAGGACCACTACGGCCTCTTTGAGGCGCCACGTATCCAGCTCGTCTGCAACCCCAACCTCGACTTCATGTACGTG
CCCGGCCACCTGTCGCACATGCTCTTCGAGACGCTCAAGAACTCGCTGCGGGCTGTCGTCGAGACGCACGGCATG
GACAAGCAGGAGTTTCCCGTGACAAAGGTCATCGTCGCCGAGGGAAAGGAGGACATCACCGTCAAGATCTCGGAC
GAGGGCGGCGGCATCCCACGGAGCGCCATCCCTCTCGTCTGGACCTACATGTACACCACCGTCGACCGTACCCCG
AACCTGGACCCGGATTTCGACAAGAGTGACTTTAAGGCGCCCATGGCTGGCTTCGGCTACGGCCTGCCCATTTCG
CGACTGTATGCGCGATATTTTGGCGGCGATTTGAAGTTGATTAGCATGGAGGGGTGCGTATCTTGTCGTGTTTTC
TTTTTTCTTTCTTTTGCCTTGGCTGACGGGATGTCTAGGTACGGCACTGACGTCTATCTGCACCTCAACCGCCTC
TCCTCCTCCTCCGAGCCTCTGCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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