© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5910 |
| Gene name | |
| Location | Contig_61:8095..9250 |
| Strand | - |
| Gene length (bp) | 1155 |
| Transcript length (bp) | 1155 |
| Coding sequence length (bp) | 1155 |
| Protein length (aa) | 385 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01126 | Heme_oxygenase | Heme oxygenase | 2.6E-06 | 15 | 260 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006788 | heme oxidation | Yes |
| GO:0004392 | heme oxygenase (decyclizing) activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | No |
| GO:0003824 | catalytic activity | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0042168 | heme metabolic process | No |
| GO:0033013 | tetrapyrrole metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0042440 | pigment metabolic process | No |
| GO:0004497 | monooxygenase activity | No |
| GO:0006778 | porphyrin-containing compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 360 | 382 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5910 MDPDLESLLLQNLPLAHTINTATRQIHSRINKLVTSRLTLSLPPQAPDATLYLVGALHIATLYAAVEQAWDQARK ADTPVAPMLESLHLRGLMRAERIRGDVVALSGWGGDVVRRCMDDVVRGPGPVAEVVRHVGRVAEERPHVLVAYAH VLFMALFAGGRYISQRVEAAGEDFWESVRGHSHHDDGKGGGEEGQQEEEREEEEAAVPLRFFRFDGPNQGQDLKH QFKSLLVSSEQLLTTSQKRDIVHEAILIFESVGRIVTQLDAVCAALPHHHHHHHPQNSSPSSTDLLLGSRLRDSI AVTRQRWENEHRHRPPRPSSVDGLADVVVSPVKAVRFQDSRAGWAVVVARCFVERAGGGSWAVVGVAAALLFALA AGRWSWLSG* |
| Coding | >Ophun1|5910 ATGGATCCCGACCTCGAATCCCTCCTCCTCCAAAACCTCCCCCTAGCCCATACCATCAACACAGCAACCCGCCAA ATCCACTCCCGCATCAACAAGCTCGTAACCTCCCGCCTAACCCTCTCCCTCCCCCCCCAAGCCCCGGACGCAACC CTCTACCTGGTAGGCGCCCTGCACATAGCCACCCTCTACGCCGCCGTCGAGCAAGCCTGGGACCAAGCCCGCAAA GCCGACACGCCCGTCGCGCCCATGCTCGAGAGCCTGCACCTGCGCGGGTTGATGCGCGCCGAGAGGATTCGCGGC GATGTCGTTGCTTTGTCCGGGTGGGGGGGCGACGTGGTGAGGAGGTGTATGGATGATGTCGTGCGTGGGCCGGGG CCCGTGGCTGAGGTTGTGAGGCATGTTGGGAGGGTGGCCGAGGAGAGGCCGCATGTTTTGGTGGCCTATGCTCAT GTCCTCTTCATGGCCTTGTTTGCGGGTGGGCGGTATATCAGCCAGAGGGTTGAGGCTGCGGGTGAGGACTTTTGG GAGTCTGTTCGGGGGCATTCGCATCATGATGATGGAAAGGGAGGAGGAGAAGAAGGACAACAAGAAGAGGAGAGG GAGGAAGAAGAAGCAGCCGTCCCTCTACGCTTCTTCCGCTTCGACGGCCCCAACCAAGGCCAAGACCTCAAGCAC CAATTCAAATCCCTCCTCGTCTCCTCCGAACAACTCCTCACCACCTCGCAAAAGCGCGACATCGTCCACGAAGCA ATCCTCATCTTCGAGTCCGTCGGCCGCATCGTCACCCAGCTAGACGCCGTCTGCGCCGCCCTCCCTCATCACCAC CACCACCACCATCCTCAGAACTCTTCTCCATCATCCACTGACCTGCTGCTGGGCTCCCGGCTGAGGGATAGCATT GCGGTTACGAGGCAGCGGTGGGAGAATGAGCATCGGCACCGACCGCCACGCCCGTCGTCGGTGGATGGTCTTGCC GACGTGGTTGTTTCTCCGGTCAAGGCTGTGCGCTTTCAGGATTCGCGGGCGGGTTGGGCTGTGGTTGTGGCGAGG TGTTTCGTGGAGAGGGCTGGGGGGGGTTCGTGGGCTGTGGTTGGGGTTGCTGCTGCTTTGCTGTTTGCGCTGGCT GCTGGGCGGTGGTCTTGGTTGAGTGGTTAG |
| Transcript | >Ophun1|5910 ATGGATCCCGACCTCGAATCCCTCCTCCTCCAAAACCTCCCCCTAGCCCATACCATCAACACAGCAACCCGCCAA ATCCACTCCCGCATCAACAAGCTCGTAACCTCCCGCCTAACCCTCTCCCTCCCCCCCCAAGCCCCGGACGCAACC CTCTACCTGGTAGGCGCCCTGCACATAGCCACCCTCTACGCCGCCGTCGAGCAAGCCTGGGACCAAGCCCGCAAA GCCGACACGCCCGTCGCGCCCATGCTCGAGAGCCTGCACCTGCGCGGGTTGATGCGCGCCGAGAGGATTCGCGGC GATGTCGTTGCTTTGTCCGGGTGGGGGGGCGACGTGGTGAGGAGGTGTATGGATGATGTCGTGCGTGGGCCGGGG CCCGTGGCTGAGGTTGTGAGGCATGTTGGGAGGGTGGCCGAGGAGAGGCCGCATGTTTTGGTGGCCTATGCTCAT GTCCTCTTCATGGCCTTGTTTGCGGGTGGGCGGTATATCAGCCAGAGGGTTGAGGCTGCGGGTGAGGACTTTTGG GAGTCTGTTCGGGGGCATTCGCATCATGATGATGGAAAGGGAGGAGGAGAAGAAGGACAACAAGAAGAGGAGAGG GAGGAAGAAGAAGCAGCCGTCCCTCTACGCTTCTTCCGCTTCGACGGCCCCAACCAAGGCCAAGACCTCAAGCAC CAATTCAAATCCCTCCTCGTCTCCTCCGAACAACTCCTCACCACCTCGCAAAAGCGCGACATCGTCCACGAAGCA ATCCTCATCTTCGAGTCCGTCGGCCGCATCGTCACCCAGCTAGACGCCGTCTGCGCCGCCCTCCCTCATCACCAC CACCACCACCATCCTCAGAACTCTTCTCCATCATCCACTGACCTGCTGCTGGGCTCCCGGCTGAGGGATAGCATT GCGGTTACGAGGCAGCGGTGGGAGAATGAGCATCGGCACCGACCGCCACGCCCGTCGTCGGTGGATGGTCTTGCC GACGTGGTTGTTTCTCCGGTCAAGGCTGTGCGCTTTCAGGATTCGCGGGCGGGTTGGGCTGTGGTTGTGGCGAGG TGTTTCGTGGAGAGGGCTGGGGGGGGTTCGTGGGCTGTGGTTGGGGTTGCTGCTGCTTTGCTGTTTGCGCTGGCT GCTGGGCGGTGGTCTTGGTTGAGTGGTTAG |
| Gene | >Ophun1|5910 ATGGATCCCGACCTCGAATCCCTCCTCCTCCAAAACCTCCCCCTAGCCCATACCATCAACACAGCAACCCGCCAA ATCCACTCCCGCATCAACAAGCTCGTAACCTCCCGCCTAACCCTCTCCCTCCCCCCCCAAGCCCCGGACGCAACC CTCTACCTGGTAGGCGCCCTGCACATAGCCACCCTCTACGCCGCCGTCGAGCAAGCCTGGGACCAAGCCCGCAAA GCCGACACGCCCGTCGCGCCCATGCTCGAGAGCCTGCACCTGCGCGGGTTGATGCGCGCCGAGAGGATTCGCGGC GATGTCGTTGCTTTGTCCGGGTGGGGGGGCGACGTGGTGAGGAGGTGTATGGATGATGTCGTGCGTGGGCCGGGG CCCGTGGCTGAGGTTGTGAGGCATGTTGGGAGGGTGGCCGAGGAGAGGCCGCATGTTTTGGTGGCCTATGCTCAT GTCCTCTTCATGGCCTTGTTTGCGGGTGGGCGGTATATCAGCCAGAGGGTTGAGGCTGCGGGTGAGGACTTTTGG GAGTCTGTTCGGGGGCATTCGCATCATGATGATGGAAAGGGAGGAGGAGAAGAAGGACAACAAGAAGAGGAGAGG GAGGAAGAAGAAGCAGCCGTCCCTCTACGCTTCTTCCGCTTCGACGGCCCCAACCAAGGCCAAGACCTCAAGCAC CAATTCAAATCCCTCCTCGTCTCCTCCGAACAACTCCTCACCACCTCGCAAAAGCGCGACATCGTCCACGAAGCA ATCCTCATCTTCGAGTCCGTCGGCCGCATCGTCACCCAGCTAGACGCCGTCTGCGCCGCCCTCCCTCATCACCAC CACCACCACCATCCTCAGAACTCTTCTCCATCATCCACTGACCTGCTGCTGGGCTCCCGGCTGAGGGATAGCATT GCGGTTACGAGGCAGCGGTGGGAGAATGAGCATCGGCACCGACCGCCACGCCCGTCGTCGGTGGATGGTCTTGCC GACGTGGTTGTTTCTCCGGTCAAGGCTGTGCGCTTTCAGGATTCGCGGGCGGGTTGGGCTGTGGTTGTGGCGAGG TGTTTCGTGGAGAGGGCTGGGGGGGGTTCGTGGGCTGTGGTTGGGGTTGCTGCTGCTTTGCTGTTTGCGCTGGCT GCTGGGCGGTGGTCTTGGTTGAGTGGTTAG |