Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|589
Gene name
LocationContig_1182:779..2789
Strand+
Gene length (bp)2010
Transcript length (bp)1815
Coding sequence length (bp)1815
Protein length (aa) 605

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01424 R3H R3H domain 3.6E-09 323 379
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.1E-04 181 251

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q09868|CIP2_SCHPO RNA-binding post-transcriptional regulator cip2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cip2 PE=1 SV=1 174 377 9.0E-50
sp|P34217|PIN4_YEAST RNA-binding protein PIN4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIN4 PE=1 SV=1 162 282 7.0E-38
sp|O42923|CIP1_SCHPO RNA-binding post-transcriptional regulator cip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cip1 PE=1 SV=1 173 377 6.0E-37

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3753
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2950
Ophiocordyceps australis map64 (Brazil) OphauB2|2922
Ophiocordyceps camponoti-floridani Ophcf2|03784
Ophiocordyceps camponoti-rufipedis Ophun1|589 (this protein)
Ophiocordyceps kimflemingae Ophio5|5000
Ophiocordyceps subramaniannii Hirsu2|7316

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|589
MSQQPHDMGYLDYASPANRSPSSSRQNYGAPFAAGLSLPRQSQRPLDAPLGSSALYPNDRMAAGFNPRAMDSMPV
NAALHGGYMLDNGQAWNYSTAGVATVNGAVHGPNRQRSVNRRAALPQSWTDHAAMPMPNSLQPFPATLNGGHLQN
GCLRLDQGPSHTSPDLRSTASDGDQLIPTAIVIKNIPFAVRKETLASIMLDMNLPQPYAFNYHFDNGVFRGLAFA
NFQSADDTRVVIDAMNGMDVHGRKLRVEYKKMLPEAERERIEREKRERRGQLEEQHRAPMLHQQASLQSLGGMSQ
SQQRSTSSHLGDVDLNDPQTLEFYTELAMFKRDEGREALIFPSSIIPEHRRLIHILAHHMGLEHQSMGEADSRQL
TVLKRQQPSPTANVQNASVVNSLDMHKRGLSRAATFDFAADRDTRAANSNYAHAPGRQGPTLELPGSPDGSGIPN
NLRAAKSFADLRSFTPSPSQASSSYLAPGAGVGSIGTTATARFGDYMAHVPQQSSGTPGPKGDNGLGVALGGLSL
SPFDPSAMAAQTRNAPGAIGSQRPSGPKAAPERQPRVPDWESSAGFGGRGAGANGHAQRGSDSSDNGSRAVPTST
GRYH*
Coding >Ophun1|589
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCCCCTGCCAACCGCTCGCCGAGCTCGTCGAGG
CAAAACTACGGCGCCCCCTTCGCCGCAGGCTTGTCGCTGCCCCGGCAATCCCAGCGCCCTCTGGATGCCCCCCTC
GGCTCCTCTGCTCTCTATCCCAACGACCGCATGGCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCCTCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCCGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAATCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGAGCTGGACC
GATCACGCCGCCATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAAT
GGCTGCCTCCGCCTCGACCAGGGCCCTTCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAG
CTGATTCCCACGGCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTC
GACATGAACCTCCCCCAGCCGTACGCCTTCAACTACCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCC
AACTTCCAGTCCGCCGACGACACCCGTGTCGTCATCGATGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTG
CGCGTCGAGTACAAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGC
CAGCTCGAGGAGCAGCACCGCGCACCCATGCTGCATCAGCAGGCATCGCTGCAGTCACTCGGCGGCATGTCTCAG
TCGCAGCAACGCAGCACCTCGAGTCACCTCGGTGATGTCGACCTAAACGATCCCCAGACGCTCGAGTTTTACACG
GAGCTTGCCATGTTCAAGCGCGACGAAGGGCGAGAGGCGCTCATATTCCCCTCCTCCATCATCCCCGAGCACCGG
CGGCTCATCCACATCCTCGCCCATCACATGGGGCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTC
ACCGTCCTGAAGCGCCAACAGCCGTCGCCCACGGCAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATG
CACAAGCGGGGCCTCAGCCGGGCCGCCACCTTTGACTTCGCCGCCGACCGCGACACCCGCGCGGCCAACAGCAAC
TACGCCCACGCCCCGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAAT
AACCTGCGCGCGGCCAAGAGCTTCGCCGACCTGCGCTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTAT
CTGGCCCCCGGCGCCGGTGTTGGTAGCATCGGCACCACGGCCACGGCCCGCTTCGGCGACTACATGGCTCACGTC
CCCCAGCAGTCGTCGGGCACCCCCGGTCCCAAAGGCGACAACGGCCTCGGCGTCGCCCTCGGTGGCCTGAGCCTC
AGTCCCTTTGACCCCAGCGCCATGGCGGCACAGACGCGCAACGCCCCGGGCGCCATCGGCAGCCAGCGGCCCAGC
GGCCCCAAGGCGGCGCCCGAGAGGCAGCCCCGTGTCCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGT
GCCGGCGCCAACGGTCACGCGCAGCGCGGCAGCGATTCGTCGGATAACGGCTCGCGCGCGGTGCCCACGTCGACG
GGCCGCTATCACTAG
Transcript >Ophun1|589
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCCCCTGCCAACCGCTCGCCGAGCTCGTCGAGG
CAAAACTACGGCGCCCCCTTCGCCGCAGGCTTGTCGCTGCCCCGGCAATCCCAGCGCCCTCTGGATGCCCCCCTC
GGCTCCTCTGCTCTCTATCCCAACGACCGCATGGCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCCTCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCCGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAATCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGAGCTGGACC
GATCACGCCGCCATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAAT
GGCTGCCTCCGCCTCGACCAGGGCCCTTCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAG
CTGATTCCCACGGCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTC
GACATGAACCTCCCCCAGCCGTACGCCTTCAACTACCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCC
AACTTCCAGTCCGCCGACGACACCCGTGTCGTCATCGATGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTG
CGCGTCGAGTACAAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGC
CAGCTCGAGGAGCAGCACCGCGCACCCATGCTGCATCAGCAGGCATCGCTGCAGTCACTCGGCGGCATGTCTCAG
TCGCAGCAACGCAGCACCTCGAGTCACCTCGGTGATGTCGACCTAAACGATCCCCAGACGCTCGAGTTTTACACG
GAGCTTGCCATGTTCAAGCGCGACGAAGGGCGAGAGGCGCTCATATTCCCCTCCTCCATCATCCCCGAGCACCGG
CGGCTCATCCACATCCTCGCCCATCACATGGGGCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTC
ACCGTCCTGAAGCGCCAACAGCCGTCGCCCACGGCAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATG
CACAAGCGGGGCCTCAGCCGGGCCGCCACCTTTGACTTCGCCGCCGACCGCGACACCCGCGCGGCCAACAGCAAC
TACGCCCACGCCCCGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAAT
AACCTGCGCGCGGCCAAGAGCTTCGCCGACCTGCGCTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTAT
CTGGCCCCCGGCGCCGGTGTTGGTAGCATCGGCACCACGGCCACGGCCCGCTTCGGCGACTACATGGCTCACGTC
CCCCAGCAGTCGTCGGGCACCCCCGGTCCCAAAGGCGACAACGGCCTCGGCGTCGCCCTCGGTGGCCTGAGCCTC
AGTCCCTTTGACCCCAGCGCCATGGCGGCACAGACGCGCAACGCCCCGGGCGCCATCGGCAGCCAGCGGCCCAGC
GGCCCCAAGGCGGCGCCCGAGAGGCAGCCCCGTGTCCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGT
GCCGGCGCCAACGGTCACGCGCAGCGCGGCAGCGATTCGTCGGATAACGGCTCGCGCGCGGTGCCCACGTCGACG
GGCCGCTATCACTAG
Gene >Ophun1|589
ATGAGCCAGCAGCCTCACGACATGGGCTACCTCGACTACGCCTCCCCTGCCAACCGCTCGCCGAGCTCGTCGAGG
CAAAACTACGGCGCCCCCTTCGCCGCAGGCTTGTCGCTGCCCCGGCAATCCCAGCGCCCTCTGGATGCCCCCCTC
GGCTCCTCTGCTCTCTATCCCAACGACCGCATGGCCGCCGGCTTCAACCCGCGCGCCATGGACAGCATGCCCGTC
AACGCCGCCCTCCACGGCGGCTACATGCTCGACAACGGACAGGCCTGGAACTACAGCACCGCCGGCGTCGCCACC
GTCAACGGCGCCGTCCACGGGCCCAATCGCCAGCGGAGCGTCAACCGCCGCGCCGCCTTGCCACAGGTCTGTATC
GCCCCTGTTTCCGGCCCTGCCGAACCAGCTGACTCTCCCCCCTCCCCTCTCCAGAGCTGGACCGATCACGCCGCC
ATGCCCATGCCAAACTCGCTGCAGCCCTTCCCCGCCACCCTCAACGGCGGCCATCTGCAGAATGGCTGCCTCCGC
CTCGACCAGGGCCCTTCCCACACCTCGCCCGACCTGCGGTCCACCGCCTCGGACGGCGACCAGCTGATTCCCACG
GCCATCGTCATCAAAAACATACCCTTTGCCGTCCGCAAGGAGACGCTCGCCTCCATCATGCTCGACATGAACCTC
CCCCAGCCGTACGCCTTCAACTACCACTTCGACAACGGCGTCTTCCGCGGCCTCGCCTTTGCCAACTTCCAGTCC
GCCGACGACACCCGTGTCGTCATCGATGCCATGAACGGCATGGACGTCCACGGCCGCAAGCTGCGCGTCGAGTAC
AAGAAGATGCTGCCCGAGGCCGAGCGGGAACGCATCGAGCGCGAGAAGCGGGAGCGTCGCGGCCAGCTCGAGGAG
CAGCACCGCGCACCCATGCTGCATCAGCAGGCATCGCTGCAGTCACTCGGCGGCATGTCTCAGTCGCAGCAACGC
AGCACCTCGAGTCACCTCGGTATGGGCCGGCCGATACGAATCCAGCGTCGTCTTTTCTTCTTCTTTTATCTGGTT
GCTGACCTCTTCCGTCAGGTGATGTCGACCTAAACGATCCCCAGACGCTCGAGTTTTACACGGAGCTTGCCATGT
TCAAGCGCGACGAAGGGCGAGAGGCGCTCATATTCCCCTCCTCCATCATCCCCGAGCACCGGCGGCTCATCCACA
TCCTCGCCCATCACATGGGGCTCGAGCATCAGTCCATGGGCGAGGCCGACTCCCGCCAGCTCACCGTCCTGAAGC
GCCAACAGCCGTCGCCCACGGCAAACGTCCAGAACGCCTCCGTCGTCAACAGCCTCGACATGCACAAGCGGGGCC
TCAGCCGGGCCGCCACCTTTGACTTCGCCGCCGACCGCGACACCCGCGCGGCCAACAGCAACTACGCCCACGCCC
CGGGCCGCCAGGGTCCCACGCTGGAGCTCCCCGGCAGCCCGGACGGGAGCGGCATACCCAATAACCTGCGCGCGG
CCAAGAGCTTCGCCGACCTGCGCTCCTTTACCCCGAGCCCGTCACAGGCATCGTCGAGCTATCTGGCCCCCGGCG
CCGGTGTTGGTAGCATCGGCACCACGGCCACGGCCCGCTTCGGCGACTACATGGCTCACGTCCCCCAGCAGTCGT
CGGGCACCCCCGGTCCCAAAGGCGACAACGGCCTCGGCGTCGCCCTCGGTGGCCTGAGCCTCAGTCCCTTTGACC
CCAGCGCCATGGCGGCACAGACGCGCAACGCCCCGGGCGCCATCGGCAGCCAGCGGCCCAGCGGCCCCAAGGCGG
CGCCCGAGAGGCAGCCCCGTGTCCCGGATTGGGAGTCATCGGCCGGCTTTGGCGGTCGCGGTGCCGGCGCCAACG
GTCACGCGCAGCGCGGCAGCGGTAGGTCGTCTTTCGCGTCCGTTCCATCACGTCAAGCTGACGGCTCGTCTGGCC
TTAGATTCGTCGGATAACGGCTCGCGCGCGGTGCCCACGTCGACGGGCCGCTATCACTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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