Protein ID | Ophun1|5884 |
Gene name | |
Location | Contig_604:4992..7583 |
Strand | - |
Gene length (bp) | 2591 |
Transcript length (bp) | 2538 |
Coding sequence length (bp) | 2538 |
Protein length (aa) | 846 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07989 | Cnn_1N | Centrosomin N-terminal motif 1 | 8.6E-08 | 136 | 202 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005815 | microtubule organizing center | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|5884 MDVPKAQQRRPLPSRPGSARIAESATSSSQLSSSQSAHRLHHATSPRPASRAMALPPQVDAPDALRQPALSSFLQ EKLQRERRAECEKLTTSPSLSRTEASGSVDGGRFFHNSTDAARPRSSTGLELPKKKKGMGVKEMEQAVSNLHKQN FDLKLELFHRRERQSALEERIEALEADREKSLTVADRLVDELDKREKAVEEAVAMIVTLEAEVDRLVRQRIQGSD GPCNFCAHRRTSSSDRPARYDDDDDTAVATKSITRMPSFLSDRGDKTENLRNVYLGSRAGSSLSLPRVAEASSEA EGATAHALASPTLSVLSESSFVSVYGNKAQGSELASSPPGYVDEPLVLDGFDAGTDRFVSPDVSINTHQPRQRAA SVGRVTSLAKPPPRSSTAVPFQSLSSVMDYQSPLERLMRLDPSACRDDWPKRSSPRAGQATKEEKREALRRVMTD APGGVRLNDHGMPPTPDTISTSTLHRFKNSDETLATHDQTPLGGALLPAADIRYATESSTGALLGHNTPPTAGAG GKSRRPAGHRRQVSSGQQRPQSARGPRGADRQPGQNSHNGWESDSELSDRRSLESSLDIWLRESAKPDKMGGHIS PDLFSFPQDAWACETAGGASGHALDLRSLRHQLFPWNGGPAPPDRSSSLRAEMGSNADGSSVSAARPRHRQSEDQ QKSSDSQMPVSPQSPPPSQQQQQQQQNGEQKRYPPIAGHHGARAGLGRLFRRSLGGGPSPAAAPSQPAEEEYLPM GVPSSVHRNNAPLNGTGADRSGATPPPIVLNPRQTPRRAESPSEVVAEADPVAPPAVSQQQQQQQQEGAGSSSTG GRRKWLPQFGRPGSSRNKGG* |
Coding | >Ophun1|5884 ATGGACGTCCCCAAGGCCCAGCAGCGACGGCCACTTCCTTCTCGTCCAGGCAGCGCCCGCATCGCCGAATCCGCG ACATCGTCGAGCCAGCTATCGAGCTCTCAGTCGGCGCACAGACTGCATCACGCCACCTCGCCCCGACCAGCTTCG CGGGCCATGGCCCTTCCGCCGCAAGTCGACGCGCCCGACGCCCTCCGCCAGCCCGCCCTATCGTCCTTTTTGCAG GAGAAGCTGCAGCGCGAACGGAGGGCCGAGTGCGAGAAACTGACGACGTCACCTTCGTTGTCCCGCACCGAGGCA AGCGGTTCTGTCGACGGGGGGCGCTTCTTCCATAACAGCACCGACGCTGCTCGCCCGAGGTCCAGCACCGGCCTG GAGCTGCCTAAGAAGAAGAAGGGCATGGGTGTCAAAGAGATGGAGCAGGCCGTGTCCAACCTCCACAAGCAAAAC TTTGACCTCAAACTCGAGCTCTTCCACCGACGTGAGCGTCAATCCGCCTTGGAGGAGCGGATCGAGGCCCTCGAG GCCGATAGGGAAAAGTCACTCACCGTCGCGGACAGGCTGGTCGACGAGTTGGATAAGCGCGAAAAGGCCGTAGAG GAGGCCGTCGCCATGATCGTCACGCTTGAGGCCGAGGTCGACCGCCTCGTTCGTCAGCGTATTCAAGGCTCGGAC GGCCCTTGTAACTTCTGCGCCCACCGCCGAACGTCAAGTTCAGACCGGCCGGCGAGATATGACGACGACGACGAC ACCGCTGTTGCCACCAAGTCCATCACCCGCATGCCCAGCTTCCTGTCTGACCGCGGCGACAAGACGGAGAACCTG CGCAACGTCTACCTCGGCAGCCGAGCCGGTAGCTCCCTCAGCCTCCCCCGCGTCGCAGAGGCTTCGTCCGAGGCC GAGGGCGCGACCGCCCACGCATTGGCCAGCCCTACCCTCAGCGTCTTGAGCGAGAGTTCCTTCGTCAGCGTCTAC GGAAACAAGGCTCAGGGCAGCGAGCTGGCTTCGTCGCCTCCCGGCTACGTCGACGAGCCTCTGGTACTCGACGGC TTCGACGCCGGTACGGATAGGTTCGTCTCCCCAGATGTGTCCATCAACACCCACCAGCCGAGGCAGCGAGCCGCT TCCGTTGGTCGCGTCACGAGCTTGGCCAAGCCCCCGCCGCGGTCGAGCACCGCCGTCCCCTTCCAGTCGCTGTCC TCCGTCATGGACTACCAGAGCCCGCTCGAGCGGCTCATGCGCCTCGACCCGTCCGCCTGCAGAGACGACTGGCCT AAGAGGTCGTCGCCCCGGGCCGGACAGGCCACCAAGGAGGAGAAGCGCGAGGCCCTGCGGCGCGTCATGACCGAT GCCCCCGGCGGCGTCCGCCTGAACGACCACGGCATGCCCCCGACGCCCGATACGATCTCGACGTCGACGCTGCAC CGGTTCAAGAACTCGGACGAGACGCTGGCCACCCACGACCAAACCCCTCTGGGCGGCGCCCTGCTGCCCGCTGCC GACATTAGGTATGCCACCGAGTCTTCCACCGGCGCACTCCTCGGCCATAACACTCCACCGACGGCCGGTGCGGGT GGCAAGTCCCGTCGGCCCGCAGGTCATCGGCGGCAGGTGTCGAGCGGCCAGCAGCGGCCGCAGTCGGCGAGAGGG CCGAGAGGCGCGGATCGCCAGCCGGGCCAGAACAGCCACAACGGCTGGGAGAGCGACAGCGAGCTCTCGGACCGA CGATCGCTGGAATCGAGTCTCGATATATGGCTGCGAGAGAGCGCCAAGCCGGATAAGATGGGCGGCCACATCTCG CCGGACCTTTTCAGCTTCCCCCAGGACGCGTGGGCGTGTGAGACGGCCGGCGGCGCTTCGGGCCACGCGCTTGAC CTCCGCTCCCTCCGTCATCAGCTGTTCCCCTGGAACGGCGGGCCAGCGCCGCCCGATCGGAGTTCCAGCCTCCGG GCGGAGATGGGATCCAATGCCGACGGATCGTCCGTGTCAGCTGCGCGGCCCCGACACCGACAGAGTGAAGATCAG CAGAAAAGCTCGGATTCGCAGATGCCAGTGTCGCCGCAGTCGCCGCCGCCTTCACAACAGCAGCAGCAGCAGCAG CAAAACGGAGAACAGAAGCGCTACCCTCCCATCGCAGGCCATCACGGGGCCCGTGCCGGCCTCGGCAGGCTGTTT CGGCGATCGCTCGGCGGCGGACCCTCGCCCGCTGCAGCACCTTCGCAGCCGGCCGAGGAGGAATATCTCCCGATG GGTGTGCCGTCGTCGGTGCATCGCAACAATGCGCCCCTGAACGGAACCGGGGCCGATCGCTCGGGCGCGACGCCA CCACCCATCGTGCTGAACCCACGGCAGACGCCGCGGCGGGCCGAATCACCGTCGGAGGTGGTGGCCGAGGCCGAT CCCGTCGCGCCGCCGGCCGTTTCTCAGCAGCAGCAGCAGCAGCAGCAGGAAGGGGCCGGTTCGTCGAGCACGGGA GGGAGGAGGAAGTGGCTTCCGCAGTTTGGGAGGCCGGGCAGTTCCAGGAATAAGGGCGGGTAG |
Transcript | >Ophun1|5884 ATGGACGTCCCCAAGGCCCAGCAGCGACGGCCACTTCCTTCTCGTCCAGGCAGCGCCCGCATCGCCGAATCCGCG ACATCGTCGAGCCAGCTATCGAGCTCTCAGTCGGCGCACAGACTGCATCACGCCACCTCGCCCCGACCAGCTTCG CGGGCCATGGCCCTTCCGCCGCAAGTCGACGCGCCCGACGCCCTCCGCCAGCCCGCCCTATCGTCCTTTTTGCAG GAGAAGCTGCAGCGCGAACGGAGGGCCGAGTGCGAGAAACTGACGACGTCACCTTCGTTGTCCCGCACCGAGGCA AGCGGTTCTGTCGACGGGGGGCGCTTCTTCCATAACAGCACCGACGCTGCTCGCCCGAGGTCCAGCACCGGCCTG GAGCTGCCTAAGAAGAAGAAGGGCATGGGTGTCAAAGAGATGGAGCAGGCCGTGTCCAACCTCCACAAGCAAAAC TTTGACCTCAAACTCGAGCTCTTCCACCGACGTGAGCGTCAATCCGCCTTGGAGGAGCGGATCGAGGCCCTCGAG GCCGATAGGGAAAAGTCACTCACCGTCGCGGACAGGCTGGTCGACGAGTTGGATAAGCGCGAAAAGGCCGTAGAG GAGGCCGTCGCCATGATCGTCACGCTTGAGGCCGAGGTCGACCGCCTCGTTCGTCAGCGTATTCAAGGCTCGGAC GGCCCTTGTAACTTCTGCGCCCACCGCCGAACGTCAAGTTCAGACCGGCCGGCGAGATATGACGACGACGACGAC ACCGCTGTTGCCACCAAGTCCATCACCCGCATGCCCAGCTTCCTGTCTGACCGCGGCGACAAGACGGAGAACCTG CGCAACGTCTACCTCGGCAGCCGAGCCGGTAGCTCCCTCAGCCTCCCCCGCGTCGCAGAGGCTTCGTCCGAGGCC GAGGGCGCGACCGCCCACGCATTGGCCAGCCCTACCCTCAGCGTCTTGAGCGAGAGTTCCTTCGTCAGCGTCTAC GGAAACAAGGCTCAGGGCAGCGAGCTGGCTTCGTCGCCTCCCGGCTACGTCGACGAGCCTCTGGTACTCGACGGC TTCGACGCCGGTACGGATAGGTTCGTCTCCCCAGATGTGTCCATCAACACCCACCAGCCGAGGCAGCGAGCCGCT TCCGTTGGTCGCGTCACGAGCTTGGCCAAGCCCCCGCCGCGGTCGAGCACCGCCGTCCCCTTCCAGTCGCTGTCC TCCGTCATGGACTACCAGAGCCCGCTCGAGCGGCTCATGCGCCTCGACCCGTCCGCCTGCAGAGACGACTGGCCT AAGAGGTCGTCGCCCCGGGCCGGACAGGCCACCAAGGAGGAGAAGCGCGAGGCCCTGCGGCGCGTCATGACCGAT GCCCCCGGCGGCGTCCGCCTGAACGACCACGGCATGCCCCCGACGCCCGATACGATCTCGACGTCGACGCTGCAC CGGTTCAAGAACTCGGACGAGACGCTGGCCACCCACGACCAAACCCCTCTGGGCGGCGCCCTGCTGCCCGCTGCC GACATTAGGTATGCCACCGAGTCTTCCACCGGCGCACTCCTCGGCCATAACACTCCACCGACGGCCGGTGCGGGT GGCAAGTCCCGTCGGCCCGCAGGTCATCGGCGGCAGGTGTCGAGCGGCCAGCAGCGGCCGCAGTCGGCGAGAGGG CCGAGAGGCGCGGATCGCCAGCCGGGCCAGAACAGCCACAACGGCTGGGAGAGCGACAGCGAGCTCTCGGACCGA CGATCGCTGGAATCGAGTCTCGATATATGGCTGCGAGAGAGCGCCAAGCCGGATAAGATGGGCGGCCACATCTCG CCGGACCTTTTCAGCTTCCCCCAGGACGCGTGGGCGTGTGAGACGGCCGGCGGCGCTTCGGGCCACGCGCTTGAC CTCCGCTCCCTCCGTCATCAGCTGTTCCCCTGGAACGGCGGGCCAGCGCCGCCCGATCGGAGTTCCAGCCTCCGG GCGGAGATGGGATCCAATGCCGACGGATCGTCCGTGTCAGCTGCGCGGCCCCGACACCGACAGAGTGAAGATCAG CAGAAAAGCTCGGATTCGCAGATGCCAGTGTCGCCGCAGTCGCCGCCGCCTTCACAACAGCAGCAGCAGCAGCAG CAAAACGGAGAACAGAAGCGCTACCCTCCCATCGCAGGCCATCACGGGGCCCGTGCCGGCCTCGGCAGGCTGTTT CGGCGATCGCTCGGCGGCGGACCCTCGCCCGCTGCAGCACCTTCGCAGCCGGCCGAGGAGGAATATCTCCCGATG GGTGTGCCGTCGTCGGTGCATCGCAACAATGCGCCCCTGAACGGAACCGGGGCCGATCGCTCGGGCGCGACGCCA CCACCCATCGTGCTGAACCCACGGCAGACGCCGCGGCGGGCCGAATCACCGTCGGAGGTGGTGGCCGAGGCCGAT CCCGTCGCGCCGCCGGCCGTTTCTCAGCAGCAGCAGCAGCAGCAGCAGGAAGGGGCCGGTTCGTCGAGCACGGGA GGGAGGAGGAAGTGGCTTCCGCAGTTTGGGAGGCCGGGCAGTTCCAGGAATAAGGGCGGGTAG |
Gene | >Ophun1|5884 ATGGACGTCCCCAAGGCCCAGCAGCGACGGCCACTTCCTTCTCGTCCAGGCAGCGCCCGCATCGCCGAATCCGCG ACATCGTCGAGCCAGCTATCGAGCTCTCAGTCGGCGCACAGACTGCATCACGCCACCTCGCCCCGACCAGCTTCG CGGGCCATGGCCCTTCCGCCGCAAGTCGACGCGCCCGACGCCCTCCGCCAGCCCGCCCTATCGTCCTTTTTGCAG GAGAAGCTGCAGCGCGAACGGAGGGCCGAGTGCGAGAAACTGACGACGTCACCTTCGTTGTCCCGCACCGAGGCA AGCGGTTCTGTCGACGGGGGGCGCTTCTTCCATAACAGCACCGACGCTGCTCGCCCGAGGTCCAGCACCGGCCTG GAGCTGCCTAAGAAGAAGAAGGGCATGGGTGTCAAAGAGATGGAGCAGGTAGGCGTTCCCTTTTCTACGTGTAGT GTCGATGGTCGCTGATGATTGTGCAGGCCGTGTCCAACCTCCACAAGCAAAACTTTGACCTCAAACTCGAGCTCT TCCACCGACGTGAGCGTCAATCCGCCTTGGAGGAGCGGATCGAGGCCCTCGAGGCCGATAGGGAAAAGTCACTCA CCGTCGCGGACAGGCTGGTCGACGAGTTGGATAAGCGCGAAAAGGCCGTAGAGGAGGCCGTCGCCATGATCGTCA CGCTTGAGGCCGAGGTCGACCGCCTCGTTCGTCAGCGTATTCAAGGCTCGGACGGCCCTTGTAACTTCTGCGCCC ACCGCCGAACGTCAAGTTCAGACCGGCCGGCGAGATATGACGACGACGACGACACCGCTGTTGCCACCAAGTCCA TCACCCGCATGCCCAGCTTCCTGTCTGACCGCGGCGACAAGACGGAGAACCTGCGCAACGTCTACCTCGGCAGCC GAGCCGGTAGCTCCCTCAGCCTCCCCCGCGTCGCAGAGGCTTCGTCCGAGGCCGAGGGCGCGACCGCCCACGCAT TGGCCAGCCCTACCCTCAGCGTCTTGAGCGAGAGTTCCTTCGTCAGCGTCTACGGAAACAAGGCTCAGGGCAGCG AGCTGGCTTCGTCGCCTCCCGGCTACGTCGACGAGCCTCTGGTACTCGACGGCTTCGACGCCGGTACGGATAGGT TCGTCTCCCCAGATGTGTCCATCAACACCCACCAGCCGAGGCAGCGAGCCGCTTCCGTTGGTCGCGTCACGAGCT TGGCCAAGCCCCCGCCGCGGTCGAGCACCGCCGTCCCCTTCCAGTCGCTGTCCTCCGTCATGGACTACCAGAGCC CGCTCGAGCGGCTCATGCGCCTCGACCCGTCCGCCTGCAGAGACGACTGGCCTAAGAGGTCGTCGCCCCGGGCCG GACAGGCCACCAAGGAGGAGAAGCGCGAGGCCCTGCGGCGCGTCATGACCGATGCCCCCGGCGGCGTCCGCCTGA ACGACCACGGCATGCCCCCGACGCCCGATACGATCTCGACGTCGACGCTGCACCGGTTCAAGAACTCGGACGAGA CGCTGGCCACCCACGACCAAACCCCTCTGGGCGGCGCCCTGCTGCCCGCTGCCGACATTAGGTATGCCACCGAGT CTTCCACCGGCGCACTCCTCGGCCATAACACTCCACCGACGGCCGGTGCGGGTGGCAAGTCCCGTCGGCCCGCAG GTCATCGGCGGCAGGTGTCGAGCGGCCAGCAGCGGCCGCAGTCGGCGAGAGGGCCGAGAGGCGCGGATCGCCAGC CGGGCCAGAACAGCCACAACGGCTGGGAGAGCGACAGCGAGCTCTCGGACCGACGATCGCTGGAATCGAGTCTCG ATATATGGCTGCGAGAGAGCGCCAAGCCGGATAAGATGGGCGGCCACATCTCGCCGGACCTTTTCAGCTTCCCCC AGGACGCGTGGGCGTGTGAGACGGCCGGCGGCGCTTCGGGCCACGCGCTTGACCTCCGCTCCCTCCGTCATCAGC TGTTCCCCTGGAACGGCGGGCCAGCGCCGCCCGATCGGAGTTCCAGCCTCCGGGCGGAGATGGGATCCAATGCCG ACGGATCGTCCGTGTCAGCTGCGCGGCCCCGACACCGACAGAGTGAAGATCAGCAGAAAAGCTCGGATTCGCAGA TGCCAGTGTCGCCGCAGTCGCCGCCGCCTTCACAACAGCAGCAGCAGCAGCAGCAAAACGGAGAACAGAAGCGCT ACCCTCCCATCGCAGGCCATCACGGGGCCCGTGCCGGCCTCGGCAGGCTGTTTCGGCGATCGCTCGGCGGCGGAC CCTCGCCCGCTGCAGCACCTTCGCAGCCGGCCGAGGAGGAATATCTCCCGATGGGTGTGCCGTCGTCGGTGCATC GCAACAATGCGCCCCTGAACGGAACCGGGGCCGATCGCTCGGGCGCGACGCCACCACCCATCGTGCTGAACCCAC GGCAGACGCCGCGGCGGGCCGAATCACCGTCGGAGGTGGTGGCCGAGGCCGATCCCGTCGCGCCGCCGGCCGTTT CTCAGCAGCAGCAGCAGCAGCAGCAGGAAGGGGCCGGTTCGTCGAGCACGGGAGGGAGGAGGAAGTGGCTTCCGC AGTTTGGGAGGCCGGGCAGTTCCAGGAATAAGGGCGGGTAG |