Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|585
Gene name
LocationContig_118:34582..35190
Strand-
Gene length (bp)608
Transcript length (bp)480
Coding sequence length (bp)480
Protein length (aa) 160

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 3.4E-11 32 155

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|585
MDLQNDQIPAGWVREGDFLVPWWQSRTGVITKWVVFLVIVLLFTLYIFGGYLHARYRIKKGLPPLAYHRCLVARR
MQPPPMAGHHNGWPQQGYYAPPPPNGFAMNNMGAPPVYDPTRPPTYMGAPPPDGGSKVDPSQWRNEPTRREPEPN
GAPDYQARP*
Coding >Ophun1|585
ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC
AGGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGGC
TACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTCGTCGCCCGACGA
ATGCAGCCTCCCCCGATGGCCGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAAC
GGATTCGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCC
CCGCCCGATGGTGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC
GGCGCGCCTGATTACCAGGCTCGGCCGTGA
Transcript >Ophun1|585
ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC
AGGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGGC
TACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTCGTCGCCCGACGA
ATGCAGCCTCCCCCGATGGCCGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAAC
GGATTCGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCC
CCGCCCGATGGTGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC
GGCGCGCCTGATTACCAGGCTCGGCCGTGA
Gene >Ophun1|585
ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC
AGGGTGAGTCTATATCCTCTGGCTGTCCTGATGGGATTCATGCAAGAGAGCCGTTTCTGACAGTGGCGGTCCTGC
GCAGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGG
CTACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCGTGAGCCCTCCCCATCC
CTCCCTACGCAACCTCGCCCGCTGACGGACCCCAGTGCCTCGTCGCCCGACGAATGCAGCCTCCCCCGATGGCCG
GCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAACGGATTCGCCATGAACAACATGG
GCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCCCCGCCCGATGGTGGCTCCAAGG
TCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAACGGCGCGCCTGATTACCAGGCTC
GGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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