© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|585 |
| Gene name | |
| Location | Contig_118:34582..35190 |
| Strand | - |
| Gene length (bp) | 608 |
| Transcript length (bp) | 480 |
| Coding sequence length (bp) | 480 |
| Protein length (aa) | 160 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12273 | RCR | Chitin synthesis regulation, resistance to Congo red | 3.4E-11 | 32 | 155 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 30 | 52 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 3082 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|585 MDLQNDQIPAGWVREGDFLVPWWQSRTGVITKWVVFLVIVLLFTLYIFGGYLHARYRIKKGLPPLAYHRCLVARR MQPPPMAGHHNGWPQQGYYAPPPPNGFAMNNMGAPPVYDPTRPPTYMGAPPPDGGSKVDPSQWRNEPTRREPEPN GAPDYQARP* |
| Coding | >Ophun1|585 ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC AGGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGGC TACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTCGTCGCCCGACGA ATGCAGCCTCCCCCGATGGCCGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAAC GGATTCGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCC CCGCCCGATGGTGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC GGCGCGCCTGATTACCAGGCTCGGCCGTGA |
| Transcript | >Ophun1|585 ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC AGGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGGC TACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCTGCCTCGTCGCCCGACGA ATGCAGCCTCCCCCGATGGCCGGCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAAC GGATTCGCCATGAACAACATGGGCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCC CCGCCCGATGGTGGCTCCAAGGTCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAAC GGCGCGCCTGATTACCAGGCTCGGCCGTGA |
| Gene | >Ophun1|585 ATGGATTTGCAGAATGATCAGATTCCGGCTGGGTGGGTGAGGGAGGGGGATTTCCTCGTGCCCTGGTGGCAGAGC AGGGTGAGTCTATATCCTCTGGCTGTCCTGATGGGATTCATGCAAGAGAGCCGTTTCTGACAGTGGCGGTCCTGC GCAGACTGGCGTCATCACCAAATGGGTCGTCTTCCTCGTCATCGTCCTCCTCTTCACCCTCTACATCTTCGGCGG CTACCTCCACGCGAGATATCGAATCAAAAAGGGCCTCCCTCCGTTGGCGTACCACCGCGTGAGCCCTCCCCATCC CTCCCTACGCAACCTCGCCCGCTGACGGACCCCAGTGCCTCGTCGCCCGACGAATGCAGCCTCCCCCGATGGCCG GCCATCACAACGGCTGGCCGCAGCAGGGCTACTACGCTCCGCCGCCCCCCAACGGATTCGCCATGAACAACATGG GCGCGCCTCCCGTCTACGATCCCACCCGTCCGCCTACCTACATGGGCGCCCCCCCGCCCGATGGTGGCTCCAAGG TCGATCCGTCGCAGTGGAGGAATGAGCCGACGCGGCGCGAGCCTGAGCCCAACGGCGCGCCTGATTACCAGGCTC GGCCGTGA |