Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5845
Gene name
LocationContig_60:479..1102
Strand+
Gene length (bp)623
Transcript length (bp)501
Coding sequence length (bp)501
Protein length (aa) 167

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 46 68 22
3 75 97 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5845
MDDTSPNPLLAALAFVVRIRWASLLIRLVRLIFLPVRLVISGLSRIASVLAVVFAPAVYIFAFCLWLSRVIIALI
LGLEFSVAVTIGITSGIILALTSSLLTNLLGMQDDADVSDRRQKLRLEPSPTVPPSWESDWFWAESSSPQAKRRQ
PSGLLSQTIHEEDSDI*
Coding >Ophun1|5845
ATGGACGACACCAGCCCAAACCCCCTCCTCGCCGCCCTCGCCTTCGTCGTCCGCATCCGCTGGGCCTCGCTCCTC
ATTCGCCTCGTCCGCCTCATCTTCCTGCCCGTCCGCCTTGTCATCTCGGGCCTCTCCCGCATCGCCTCCGTTCTC
GCCGTTGTCTTCGCCCCGGCCGTGTACATATTCGCTTTCTGTCTGTGGCTCTCAAGAGTCATCATTGCCTTGATC
CTTGGCTTAGAGTTCAGCGTCGCCGTCACCATCGGCATCACCTCAGGCATCATTCTTGCCCTCACATCCTCCCTC
TTAACAAACTTGCTCGGCATGCAGGACGATGCAGACGTCTCGGATCGTCGGCAGAAGCTTCGACTGGAGCCTTCG
CCGACGGTGCCGCCCTCGTGGGAATCCGACTGGTTTTGGGCAGAGTCCTCCTCGCCTCAGGCCAAACGTCGGCAG
CCGTCTGGTCTCCTCTCTCAGACCATTCACGAAGAGGACTCGGACATATAG
Transcript >Ophun1|5845
ATGGACGACACCAGCCCAAACCCCCTCCTCGCCGCCCTCGCCTTCGTCGTCCGCATCCGCTGGGCCTCGCTCCTC
ATTCGCCTCGTCCGCCTCATCTTCCTGCCCGTCCGCCTTGTCATCTCGGGCCTCTCCCGCATCGCCTCCGTTCTC
GCCGTTGTCTTCGCCCCGGCCGTGTACATATTCGCTTTCTGTCTGTGGCTCTCAAGAGTCATCATTGCCTTGATC
CTTGGCTTAGAGTTCAGCGTCGCCGTCACCATCGGCATCACCTCAGGCATCATTCTTGCCCTCACATCCTCCCTC
TTAACAAACTTGCTCGGCATGCAGGACGATGCAGACGTCTCGGATCGTCGGCAGAAGCTTCGACTGGAGCCTTCG
CCGACGGTGCCGCCCTCGTGGGAATCCGACTGGTTTTGGGCAGAGTCCTCCTCGCCTCAGGCCAAACGTCGGCAG
CCGTCTGGTCTCCTCTCTCAGACCATTCACGAAGAGGACTCGGACATATAG
Gene >Ophun1|5845
ATGGACGACACCAGCCCAAACCCCCTCCTCGCCGCCCTCGCCTTCGTCGTCCGCATCCGCTGGGCCTCGCTCCTC
ATTCGCCTCGTCCGCCTCATCTTCCTGCCCGTCCGCCTTGTCATCTCGGGCCTCTCCCGCATCGCCTCCGTTCTC
GCCGTTGTCTTCGCCCCGGCCGTGTACATATTCGCTTTCTGTCTGTGGCTCTCAAGAGTCATCATTGCCTTGATC
CTTGGCTTAGAGGTCCGTCTCTGTCAGAACCGCACAAGCATTCGCTGACTCTTCTACTCATCAGCCCCTGTATAA
ATTTGTGAGAGTTCCCGGTCCCGTTCATCCCTTGTTCCCTCGACTCACTCTCCTCTCAGTTCAGCGTCGCCGTCA
CCATCGGCATCACCTCAGGCATCATTCTTGCCCTCACATCCTCCCTCTTAACAAACTTGCTCGGCATGCAGGACG
ATGCAGACGTCTCGGATCGTCGGCAGAAGCTTCGACTGGAGCCTTCGCCGACGGTGCCGCCCTCGTGGGAATCCG
ACTGGTTTTGGGCAGAGTCCTCCTCGCCTCAGGCCAAACGTCGGCAGCCGTCTGGTCTCCTCTCTCAGACCATTC
ACGAAGAGGACTCGGACATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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