Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5836
Gene name
LocationContig_6:67755..70197
Strand+
Gene length (bp)2442
Transcript length (bp)2442
Coding sequence length (bp)2442
Protein length (aa) 814

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00924 MS_channel Mechanosensitive ion channel 9.3E-22 449 621

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1 103 677 7.0E-125
sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1 54 676 3.0E-73
sp|Q84M97|MSL9_ARATH Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana GN=MSL9 PE=1 SV=1 189 660 9.0E-33
sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10 OS=Arabidopsis thaliana GN=MSL10 PE=1 SV=1 358 660 1.0E-28
sp|F4IME2|MSL8_ARATH Mechanosensitive ion channel protein 8 OS=Arabidopsis thaliana GN=MSL8 PE=2 SV=2 235 683 3.0E-23
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1 103 677 7.0E-125
sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1 54 676 3.0E-73
sp|Q84M97|MSL9_ARATH Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana GN=MSL9 PE=1 SV=1 189 660 9.0E-33
sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10 OS=Arabidopsis thaliana GN=MSL10 PE=1 SV=1 358 660 1.0E-28
sp|F4IME2|MSL8_ARATH Mechanosensitive ion channel protein 8 OS=Arabidopsis thaliana GN=MSL8 PE=2 SV=2 235 683 3.0E-23
sp|Q9LPG3|MSL4_ARATH Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana GN=MSL4 PE=3 SV=1 358 668 1.0E-22
sp|Q9LH74|MSL5_ARATH Mechanosensitive ion channel protein 5 OS=Arabidopsis thaliana GN=MSL5 PE=2 SV=1 358 698 5.0E-22
sp|F4IME1|MSL7_ARATH Mechanosensitive ion channel protein 7 OS=Arabidopsis thaliana GN=MSL7 PE=3 SV=1 239 668 1.0E-20
sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6 OS=Arabidopsis thaliana GN=MSL6 PE=1 SV=1 358 694 6.0E-20
[Show less]

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0006810 transport No
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

Domain # Start End Length
1 106 128 22
2 157 179 22
3 192 209 17
4 229 251 22
5 449 471 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5836
MTNDAKPQAWGASQPLPTQEDYFSEVESLVSTPSQRAHHVREKDNLEILRIERRVSHAQREAALNAESEMGDDYD
EDENTSDKQGGRHALDKLRSMVHKLPRFVRYLVYLVPGAILLLIPVLLGTVNADPDSRLLGGVGGVELMWFGIWL
EIMWCSLWLSRLVTSALPYVLAGFAWIMASHVIKQWKEFGRRLEVPCAVFLWFLAILISFKPTNDGHHARSPGED
DPGLAWVNTVNKVIIALFTLATLNFLEKIVIQWIATSFHRRTYSTRIQNNKADIRQLAQLYEHAKVKLNHNHTFW
QNAGPGVGGSTTTTLQTLHENARQVLGKFGQVAGKVGNDLIGRKVSIDATLKIVEELLRSTMASYTLARFIYRSL
VRCDRETVYPEDMKAVFKTKEEVDAAFNVFDKDLNGDISLEEFQVVCNEIHLEKKAIAASLKDLDSVIHKLDRVF
LFIIVIIAAIVFIVTMSGSATAGLASVGSTVLGLAWMLQATAQEFLQSIIFVFIKHPFDVGDRVTIYGSTGAQMK
GDEYYVTEISLLYTEFKKMQGHIVQAPNSLLNTLFILNYRRSNGTSDPIRLEMRFGTPAHQIEELKDRLLAFCLR
NKRDFYPKVVTEMLKLEDVRSCAMNIVVKHKGNFQSETLRQTRHNKLVTEIMQLMTAIGIQGPYRTDPGGSIEFP
MYWTGVQPPPSAAPAPGTTPGPTPGDGLPTQGAPLSTSARTLPSLRRHRRTLVDDDGTGDPENVYEHRRDMVAIS
RRVSIRKKERGFRLETEAQAAVESPPEMVARSTSRVTRTPSRPGFFQRSASLFSKGSEPETPV*
Coding >Ophun1|5836
ATGACGAACGACGCCAAACCCCAAGCTTGGGGCGCCTCACAGCCCCTTCCAACTCAAGAAGATTACTTCTCAGAA
GTAGAATCCCTCGTCTCAACACCAAGCCAACGCGCCCACCACGTCCGCGAGAAAGATAACCTCGAAATCCTCCGA
ATCGAACGACGCGTCAGCCACGCCCAACGCGAAGCCGCCTTAAACGCCGAGTCGGAAATGGGAGACGACTACGAC
GAAGATGAGAACACTTCTGACAAACAGGGTGGAAGACATGCCCTCGATAAGCTGCGATCCATGGTGCATAAGCTG
CCTCGCTTCGTCCGCTACCTCGTCTATCTCGTTCCGGGGGCTATCCTGCTGCTCATTCCCGTCTTGCTGGGGACG
GTGAATGCCGATCCGGATAGTCGGTTGCTTGGGGGGGTGGGGGGCGTTGAACTCATGTGGTTTGGGATTTGGTTG
GAGATTATGTGGTGTTCGCTTTGGCTTTCGAGGTTGGTTACTAGTGCTTTGCCGTATGTGCTTGCTGGGTTTGCT
TGGATCATGGCTTCGCATGTTATCAAGCAGTGGAAGGAGTTTGGGAGGAGGTTGGAGGTTCCCTGTGCTGTTTTC
CTATGGTTTCTTGCCATACTCATCTCGTTTAAGCCTACCAACGATGGCCATCACGCTCGATCCCCGGGGGAAGAT
GACCCGGGACTGGCATGGGTCAATACCGTCAACAAGGTCATCATCGCCCTCTTCACCCTGGCAACGCTCAACTTT
CTAGAAAAGATTGTCATCCAATGGATAGCAACCTCGTTCCACCGGCGAACCTACTCAACCCGCATCCAAAACAAC
AAAGCCGACATCCGCCAACTCGCCCAACTCTACGAACACGCAAAGGTCAAGCTCAACCACAACCACACCTTCTGG
CAGAACGCCGGCCCGGGCGTCGGCGGCTCCACGACGACGACGCTGCAGACGCTGCACGAGAATGCGAGGCAGGTG
CTCGGCAAGTTTGGGCAGGTTGCTGGCAAAGTCGGCAATGACCTCATCGGGAGAAAAGTTAGTATCGATGCGACG
CTCAAGATTGTCGAGGAGTTGTTGAGGAGTACCATGGCTTCGTATACGCTGGCCAGGTTTATTTATCGGAGTTTG
GTGAGGTGTGATCGCGAGACGGTTTATCCCGAGGATATGAAGGCTGTCTTTAAGACCAAGGAGGAGGTTGACGCT
GCCTTTAACGTCTTTGACAAGGATCTCAACGGCGACATCTCACTCGAAGAGTTTCAAGTCGTCTGCAACGAAATC
CACCTCGAGAAGAAAGCCATCGCCGCCTCCCTCAAAGATCTCGACTCAGTAATCCACAAACTCGACCGCGTCTTC
CTCTTCATCATCGTCATCATCGCCGCCATCGTCTTCATCGTCACAATGTCCGGCTCCGCGACTGCAGGTCTCGCC
TCTGTTGGAAGCACCGTCCTCGGCCTCGCCTGGATGCTGCAAGCCACGGCGCAAGAGTTCCTCCAGTCCATCATC
TTCGTCTTTATCAAGCATCCGTTTGATGTGGGGGATCGCGTCACCATCTATGGATCGACGGGCGCGCAGATGAAG
GGGGATGAGTATTACGTTACCGAGATTTCGCTTCTGTATACTGAGTTTAAGAAGATGCAGGGGCATATCGTGCAG
GCGCCCAACTCGCTGCTGAACACGCTCTTCATCCTCAACTATCGGCGTTCGAACGGGACTTCGGATCCGATTAGA
CTGGAGATGCGGTTTGGAACGCCGGCTCATCAGATTGAAGAGCTCAAGGACAGGCTACTTGCCTTTTGTCTGCGG
AACAAGCGGGATTTCTACCCCAAGGTCGTGACGGAGATGCTCAAACTCGAAGACGTCCGCTCATGCGCAATGAAC
ATTGTCGTCAAGCACAAAGGCAACTTCCAAAGCGAGACACTCCGCCAGACACGCCACAACAAGCTGGTGACAGAG
ATTATGCAGCTAATGACAGCCATCGGCATCCAGGGCCCCTACCGCACCGACCCGGGCGGCAGCATCGAGTTCCCC
ATGTACTGGACCGGCGTCCAGCCACCTCCGTCTGCGGCTCCGGCTCCGGGCACGACTCCGGGTCCGACGCCGGGA
GATGGCTTGCCGACGCAGGGCGCACCGCTCAGCACCTCTGCTCGAACGCTGCCCAGCTTGAGAAGACATAGACGG
ACGCTCGTCGATGATGATGGGACGGGAGACCCTGAGAATGTGTATGAGCATCGCCGGGATATGGTGGCCATCTCT
CGGCGGGTGTCTATCCGCAAGAAGGAACGTGGGTTTAGGCTTGAGACGGAGGCTCAGGCTGCGGTTGAGTCGCCG
CCCGAGATGGTGGCGAGGTCGACGTCGAGGGTTACGAGGACGCCGTCGAGGCCGGGCTTCTTTCAGCGGTCGGCG
AGTTTGTTTAGTAAGGGCAGCGAGCCTGAAACGCCGGTGTGA
Transcript >Ophun1|5836
ATGACGAACGACGCCAAACCCCAAGCTTGGGGCGCCTCACAGCCCCTTCCAACTCAAGAAGATTACTTCTCAGAA
GTAGAATCCCTCGTCTCAACACCAAGCCAACGCGCCCACCACGTCCGCGAGAAAGATAACCTCGAAATCCTCCGA
ATCGAACGACGCGTCAGCCACGCCCAACGCGAAGCCGCCTTAAACGCCGAGTCGGAAATGGGAGACGACTACGAC
GAAGATGAGAACACTTCTGACAAACAGGGTGGAAGACATGCCCTCGATAAGCTGCGATCCATGGTGCATAAGCTG
CCTCGCTTCGTCCGCTACCTCGTCTATCTCGTTCCGGGGGCTATCCTGCTGCTCATTCCCGTCTTGCTGGGGACG
GTGAATGCCGATCCGGATAGTCGGTTGCTTGGGGGGGTGGGGGGCGTTGAACTCATGTGGTTTGGGATTTGGTTG
GAGATTATGTGGTGTTCGCTTTGGCTTTCGAGGTTGGTTACTAGTGCTTTGCCGTATGTGCTTGCTGGGTTTGCT
TGGATCATGGCTTCGCATGTTATCAAGCAGTGGAAGGAGTTTGGGAGGAGGTTGGAGGTTCCCTGTGCTGTTTTC
CTATGGTTTCTTGCCATACTCATCTCGTTTAAGCCTACCAACGATGGCCATCACGCTCGATCCCCGGGGGAAGAT
GACCCGGGACTGGCATGGGTCAATACCGTCAACAAGGTCATCATCGCCCTCTTCACCCTGGCAACGCTCAACTTT
CTAGAAAAGATTGTCATCCAATGGATAGCAACCTCGTTCCACCGGCGAACCTACTCAACCCGCATCCAAAACAAC
AAAGCCGACATCCGCCAACTCGCCCAACTCTACGAACACGCAAAGGTCAAGCTCAACCACAACCACACCTTCTGG
CAGAACGCCGGCCCGGGCGTCGGCGGCTCCACGACGACGACGCTGCAGACGCTGCACGAGAATGCGAGGCAGGTG
CTCGGCAAGTTTGGGCAGGTTGCTGGCAAAGTCGGCAATGACCTCATCGGGAGAAAAGTTAGTATCGATGCGACG
CTCAAGATTGTCGAGGAGTTGTTGAGGAGTACCATGGCTTCGTATACGCTGGCCAGGTTTATTTATCGGAGTTTG
GTGAGGTGTGATCGCGAGACGGTTTATCCCGAGGATATGAAGGCTGTCTTTAAGACCAAGGAGGAGGTTGACGCT
GCCTTTAACGTCTTTGACAAGGATCTCAACGGCGACATCTCACTCGAAGAGTTTCAAGTCGTCTGCAACGAAATC
CACCTCGAGAAGAAAGCCATCGCCGCCTCCCTCAAAGATCTCGACTCAGTAATCCACAAACTCGACCGCGTCTTC
CTCTTCATCATCGTCATCATCGCCGCCATCGTCTTCATCGTCACAATGTCCGGCTCCGCGACTGCAGGTCTCGCC
TCTGTTGGAAGCACCGTCCTCGGCCTCGCCTGGATGCTGCAAGCCACGGCGCAAGAGTTCCTCCAGTCCATCATC
TTCGTCTTTATCAAGCATCCGTTTGATGTGGGGGATCGCGTCACCATCTATGGATCGACGGGCGCGCAGATGAAG
GGGGATGAGTATTACGTTACCGAGATTTCGCTTCTGTATACTGAGTTTAAGAAGATGCAGGGGCATATCGTGCAG
GCGCCCAACTCGCTGCTGAACACGCTCTTCATCCTCAACTATCGGCGTTCGAACGGGACTTCGGATCCGATTAGA
CTGGAGATGCGGTTTGGAACGCCGGCTCATCAGATTGAAGAGCTCAAGGACAGGCTACTTGCCTTTTGTCTGCGG
AACAAGCGGGATTTCTACCCCAAGGTCGTGACGGAGATGCTCAAACTCGAAGACGTCCGCTCATGCGCAATGAAC
ATTGTCGTCAAGCACAAAGGCAACTTCCAAAGCGAGACACTCCGCCAGACACGCCACAACAAGCTGGTGACAGAG
ATTATGCAGCTAATGACAGCCATCGGCATCCAGGGCCCCTACCGCACCGACCCGGGCGGCAGCATCGAGTTCCCC
ATGTACTGGACCGGCGTCCAGCCACCTCCGTCTGCGGCTCCGGCTCCGGGCACGACTCCGGGTCCGACGCCGGGA
GATGGCTTGCCGACGCAGGGCGCACCGCTCAGCACCTCTGCTCGAACGCTGCCCAGCTTGAGAAGACATAGACGG
ACGCTCGTCGATGATGATGGGACGGGAGACCCTGAGAATGTGTATGAGCATCGCCGGGATATGGTGGCCATCTCT
CGGCGGGTGTCTATCCGCAAGAAGGAACGTGGGTTTAGGCTTGAGACGGAGGCTCAGGCTGCGGTTGAGTCGCCG
CCCGAGATGGTGGCGAGGTCGACGTCGAGGGTTACGAGGACGCCGTCGAGGCCGGGCTTCTTTCAGCGGTCGGCG
AGTTTGTTTAGTAAGGGCAGCGAGCCTGAAACGCCGGTGTGA
Gene >Ophun1|5836
ATGACGAACGACGCCAAACCCCAAGCTTGGGGCGCCTCACAGCCCCTTCCAACTCAAGAAGATTACTTCTCAGAA
GTAGAATCCCTCGTCTCAACACCAAGCCAACGCGCCCACCACGTCCGCGAGAAAGATAACCTCGAAATCCTCCGA
ATCGAACGACGCGTCAGCCACGCCCAACGCGAAGCCGCCTTAAACGCCGAGTCGGAAATGGGAGACGACTACGAC
GAAGATGAGAACACTTCTGACAAACAGGGTGGAAGACATGCCCTCGATAAGCTGCGATCCATGGTGCATAAGCTG
CCTCGCTTCGTCCGCTACCTCGTCTATCTCGTTCCGGGGGCTATCCTGCTGCTCATTCCCGTCTTGCTGGGGACG
GTGAATGCCGATCCGGATAGTCGGTTGCTTGGGGGGGTGGGGGGCGTTGAACTCATGTGGTTTGGGATTTGGTTG
GAGATTATGTGGTGTTCGCTTTGGCTTTCGAGGTTGGTTACTAGTGCTTTGCCGTATGTGCTTGCTGGGTTTGCT
TGGATCATGGCTTCGCATGTTATCAAGCAGTGGAAGGAGTTTGGGAGGAGGTTGGAGGTTCCCTGTGCTGTTTTC
CTATGGTTTCTTGCCATACTCATCTCGTTTAAGCCTACCAACGATGGCCATCACGCTCGATCCCCGGGGGAAGAT
GACCCGGGACTGGCATGGGTCAATACCGTCAACAAGGTCATCATCGCCCTCTTCACCCTGGCAACGCTCAACTTT
CTAGAAAAGATTGTCATCCAATGGATAGCAACCTCGTTCCACCGGCGAACCTACTCAACCCGCATCCAAAACAAC
AAAGCCGACATCCGCCAACTCGCCCAACTCTACGAACACGCAAAGGTCAAGCTCAACCACAACCACACCTTCTGG
CAGAACGCCGGCCCGGGCGTCGGCGGCTCCACGACGACGACGCTGCAGACGCTGCACGAGAATGCGAGGCAGGTG
CTCGGCAAGTTTGGGCAGGTTGCTGGCAAAGTCGGCAATGACCTCATCGGGAGAAAAGTTAGTATCGATGCGACG
CTCAAGATTGTCGAGGAGTTGTTGAGGAGTACCATGGCTTCGTATACGCTGGCCAGGTTTATTTATCGGAGTTTG
GTGAGGTGTGATCGCGAGACGGTTTATCCCGAGGATATGAAGGCTGTCTTTAAGACCAAGGAGGAGGTTGACGCT
GCCTTTAACGTCTTTGACAAGGATCTCAACGGCGACATCTCACTCGAAGAGTTTCAAGTCGTCTGCAACGAAATC
CACCTCGAGAAGAAAGCCATCGCCGCCTCCCTCAAAGATCTCGACTCAGTAATCCACAAACTCGACCGCGTCTTC
CTCTTCATCATCGTCATCATCGCCGCCATCGTCTTCATCGTCACAATGTCCGGCTCCGCGACTGCAGGTCTCGCC
TCTGTTGGAAGCACCGTCCTCGGCCTCGCCTGGATGCTGCAAGCCACGGCGCAAGAGTTCCTCCAGTCCATCATC
TTCGTCTTTATCAAGCATCCGTTTGATGTGGGGGATCGCGTCACCATCTATGGATCGACGGGCGCGCAGATGAAG
GGGGATGAGTATTACGTTACCGAGATTTCGCTTCTGTATACTGAGTTTAAGAAGATGCAGGGGCATATCGTGCAG
GCGCCCAACTCGCTGCTGAACACGCTCTTCATCCTCAACTATCGGCGTTCGAACGGGACTTCGGATCCGATTAGA
CTGGAGATGCGGTTTGGAACGCCGGCTCATCAGATTGAAGAGCTCAAGGACAGGCTACTTGCCTTTTGTCTGCGG
AACAAGCGGGATTTCTACCCCAAGGTCGTGACGGAGATGCTCAAACTCGAAGACGTCCGCTCATGCGCAATGAAC
ATTGTCGTCAAGCACAAAGGCAACTTCCAAAGCGAGACACTCCGCCAGACACGCCACAACAAGCTGGTGACAGAG
ATTATGCAGCTAATGACAGCCATCGGCATCCAGGGCCCCTACCGCACCGACCCGGGCGGCAGCATCGAGTTCCCC
ATGTACTGGACCGGCGTCCAGCCACCTCCGTCTGCGGCTCCGGCTCCGGGCACGACTCCGGGTCCGACGCCGGGA
GATGGCTTGCCGACGCAGGGCGCACCGCTCAGCACCTCTGCTCGAACGCTGCCCAGCTTGAGAAGACATAGACGG
ACGCTCGTCGATGATGATGGGACGGGAGACCCTGAGAATGTGTATGAGCATCGCCGGGATATGGTGGCCATCTCT
CGGCGGGTGTCTATCCGCAAGAAGGAACGTGGGTTTAGGCTTGAGACGGAGGCTCAGGCTGCGGTTGAGTCGCCG
CCCGAGATGGTGGCGAGGTCGACGTCGAGGGTTACGAGGACGCCGTCGAGGCCGGGCTTCTTTCAGCGGTCGGCG
AGTTTGTTTAGTAAGGGCAGCGAGCCTGAAACGCCGGTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail