Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5832
Gene name
LocationContig_6:60567..61152
Strand+
Gene length (bp)585
Transcript length (bp)585
Coding sequence length (bp)585
Protein length (aa) 195

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10306 FLILHELTA Hypothetical protein FLILHELTA 2.0E-26 34 118

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 58 80 22
2 148 170 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5832
MLRSSLPRPRPRPRALRIPRKRRHASSFTSRIDKLTSKLPPRWQKYATRLRTAPASHIAAFVVLHEVTAIVPLLA
LFALFHNTTIVPVDWVAARFAAYTDEGVARMERYFRRKRWFGFQPEPSEEVNGPDHEHTEHAMQRRKDGDRSYRI
LVDVALAYAVTKVLLPVRILASLLATPWLARVITSIRSPLSRKP*
Coding >Ophun1|5832
ATGCTCCGAAGCTCACTCCCTCGTCCTCGTCCTCGTCCCCGCGCCCTCCGCATTCCCCGAAAACGACGTCACGCC
TCATCATTCACCTCACGTATCGACAAGCTCACCTCCAAGCTTCCCCCCCGATGGCAAAAGTACGCCACCCGCCTC
CGAACTGCGCCAGCCTCCCACATCGCCGCCTTCGTTGTCCTCCATGAAGTCACGGCCATTGTGCCTCTCCTTGCC
CTCTTCGCTTTGTTCCACAACACCACCATCGTGCCCGTCGATTGGGTGGCGGCGAGGTTCGCTGCCTACACGGAC
GAAGGTGTCGCCCGTATGGAGCGATACTTTCGTCGAAAGCGCTGGTTCGGGTTTCAACCTGAGCCGTCAGAAGAG
GTCAACGGACCTGATCACGAGCATACGGAGCATGCTATGCAGCGGCGGAAGGACGGGGATCGCAGCTATCGGATA
CTCGTCGATGTGGCGCTGGCCTATGCCGTAACAAAGGTGCTGCTGCCCGTTCGCATCTTGGCTAGTCTGCTGGCT
ACGCCTTGGCTCGCCCGTGTCATCACTAGCATCCGCAGTCCTCTGTCTCGCAAGCCATGA
Transcript >Ophun1|5832
ATGCTCCGAAGCTCACTCCCTCGTCCTCGTCCTCGTCCCCGCGCCCTCCGCATTCCCCGAAAACGACGTCACGCC
TCATCATTCACCTCACGTATCGACAAGCTCACCTCCAAGCTTCCCCCCCGATGGCAAAAGTACGCCACCCGCCTC
CGAACTGCGCCAGCCTCCCACATCGCCGCCTTCGTTGTCCTCCATGAAGTCACGGCCATTGTGCCTCTCCTTGCC
CTCTTCGCTTTGTTCCACAACACCACCATCGTGCCCGTCGATTGGGTGGCGGCGAGGTTCGCTGCCTACACGGAC
GAAGGTGTCGCCCGTATGGAGCGATACTTTCGTCGAAAGCGCTGGTTCGGGTTTCAACCTGAGCCGTCAGAAGAG
GTCAACGGACCTGATCACGAGCATACGGAGCATGCTATGCAGCGGCGGAAGGACGGGGATCGCAGCTATCGGATA
CTCGTCGATGTGGCGCTGGCCTATGCCGTAACAAAGGTGCTGCTGCCCGTTCGCATCTTGGCTAGTCTGCTGGCT
ACGCCTTGGCTCGCCCGTGTCATCACTAGCATCCGCAGTCCTCTGTCTCGCAAGCCATGA
Gene >Ophun1|5832
ATGCTCCGAAGCTCACTCCCTCGTCCTCGTCCTCGTCCCCGCGCCCTCCGCATTCCCCGAAAACGACGTCACGCC
TCATCATTCACCTCACGTATCGACAAGCTCACCTCCAAGCTTCCCCCCCGATGGCAAAAGTACGCCACCCGCCTC
CGAACTGCGCCAGCCTCCCACATCGCCGCCTTCGTTGTCCTCCATGAAGTCACGGCCATTGTGCCTCTCCTTGCC
CTCTTCGCTTTGTTCCACAACACCACCATCGTGCCCGTCGATTGGGTGGCGGCGAGGTTCGCTGCCTACACGGAC
GAAGGTGTCGCCCGTATGGAGCGATACTTTCGTCGAAAGCGCTGGTTCGGGTTTCAACCTGAGCCGTCAGAAGAG
GTCAACGGACCTGATCACGAGCATACGGAGCATGCTATGCAGCGGCGGAAGGACGGGGATCGCAGCTATCGGATA
CTCGTCGATGTGGCGCTGGCCTATGCCGTAACAAAGGTGCTGCTGCCCGTTCGCATCTTGGCTAGTCTGCTGGCT
ACGCCTTGGCTCGCCCGTGTCATCACTAGCATCCGCAGTCCTCTGTCTCGCAAGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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