Protein ID | Ophun1|5817 |
Gene name | |
Location | Contig_6:22269..25089 |
Strand | - |
Gene length (bp) | 2820 |
Transcript length (bp) | 2100 |
Coding sequence length (bp) | 2100 |
Protein length (aa) | 700 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|5817 MTPRLTARGLELGSSLSLGWLLIIILGGGVIVFTGLGLGLAWRLKRIRRQRQQQRDPDMRMGVYSGETSRTRLTK MSGGYLPALSSGGPETQLTPTPPPILKQPQSPTRMHLRSPVSLQQRGPPVERERDQRGRLPLSQFSPERNHGREE RVGAPQLPRLSPQREQGQGQGQHLSMLQLPQLSPGRNLVVEQRRSAPQLPQLSPQRSQQQLRSPQLRPQRDQVQE QNLGAAQQSKFGPVWSLAHEEQRSAPQLPQLSTRRDQLHEERHSPVRSSALELSPQRDQPHEQHHSPVRGSAHEL LLRSPKLPQLIPVRSSAHEQQLSPQRDQFHEQQLRSPKLPQLIPVRTPAHEPQPNPVRTSAHEQLSPPQLPPLSP QRAQAREQQLNSLPTPQLSPIQPQLPSSPETPSPQHSSFSPLQHENFSPVRFTIPNPQFSSIRKPNLTSNDEQAT QKPQLTTPSQPQPQPPPLPSRAPTVKPKATPSGPRPLRRIKTLSTGKPDRESSPSPTPTSKPLRPISANSLHAIF RSEEEQPAKQTASIVSESVRSDDDEPATCRSSMLSDAYSEQEIMSMLMTDERALPKTPAPALGNTIAQLRRMNSV VSDVSSTTTATTNMVNDRIADSPTLPSHFSGQPSVAPPRPMMPRPGANGKRHYFNIGGGRRPETRRRGNDADGGL AGLRRSVELSSAAQSSPRSPGIVR* |
Coding | >Ophun1|5817 ATGACGCCCCGCCTCACCGCCCGAGGCCTCGAGCTCGGCAGCAGCCTCAGCCTCGGCTGGCTGCTGATCATCATC CTCGGCGGCGGCGTAATCGTCTTCACGGGTCTAGGCCTAGGACTGGCCTGGCGACTGAAGCGAATCCGACGGCAA CGACAGCAGCAGCGGGATCCGGACATGCGGATGGGTGTGTACAGCGGCGAGACCTCGCGGACGAGGCTTACAAAG ATGTCGGGTGGCTATCTGCCTGCTCTGTCGAGTGGAGGTCCCGAGACGCAACTCACCCCTACGCCGCCCCCCATC CTCAAGCAACCGCAAAGCCCGACGCGGATGCATCTCCGCAGCCCGGTGAGCCTGCAGCAGCGCGGCCCGCCCGTT GAGAGAGAGAGGGATCAGCGTGGACGGCTTCCGCTTTCGCAGTTTAGCCCGGAGCGGAATCATGGGCGTGAGGAG CGGGTTGGGGCGCCTCAGCTTCCGCGGTTGAGTCCTCAGCGGGAACAGGGGCAGGGGCAGGGGCAGCATCTTAGT ATGCTGCAGCTTCCGCAGTTGAGTCCTGGGCGGAACTTGGTTGTTGAGCAGCGTCGCAGTGCGCCTCAGCTTCCG CAGCTTAGTCCTCAGCGAAGCCAGCAGCAACTTCGCTCCCCGCAGCTTCGCCCTCAGCGAGATCAGGTACAGGAG CAGAATCTCGGTGCGGCTCAGCAGTCGAAATTCGGTCCTGTTTGGAGTTTAGCTCACGAGGAGCAACGGAGTGCG CCGCAGCTTCCGCAACTCAGCACTCGACGAGACCAGCTTCACGAGGAGCGTCACAGTCCTGTTCGCAGTTCAGCT CTCGAGCTCAGCCCTCAACGAGACCAACCTCACGAGCAGCATCACAGTCCTGTCCGTGGTTCAGCTCACGAGCTG CTACTTCGCTCCCCCAAGCTCCCGCAACTCATCCCTGTTCGGAGTTCGGCTCACGAGCAGCAACTGAGTCCTCAA CGAGACCAATTTCACGAGCAGCAACTCCGCTCCCCCAAGCTCCCGCAACTCATCCCTGTCCGCACTCCAGCTCAC GAGCCGCAACCGAATCCAGTCCGAACCTCAGCTCACGAGCAACTCAGCCCCCCCCAGCTCCCCCCCCTCAGCCCC CAGCGAGCTCAAGCCCGCGAACAGCAACTCAACTCCCTCCCAACACCACAACTCAGCCCCATCCAACCCCAACTC CCCAGCAGCCCCGAAACTCCCTCCCCCCAACACTCATCCTTCTCCCCCCTCCAACATGAAAACTTCAGCCCCGTT CGCTTCACCATCCCGAACCCCCAATTCAGTTCCATTCGCAAACCCAACCTCACCTCCAACGACGAGCAAGCCACT CAAAAACCCCAACTCACAACCCCTTCACAACCACAACCACAACCTCCTCCCCTCCCCTCTCGCGCCCCCACGGTG AAACCAAAAGCAACTCCGTCAGGCCCCCGCCCCCTCCGACGCATCAAGACGCTCTCGACCGGGAAACCAGATCGC GAAAGCAGCCCTTCGCCTACTCCCACTTCCAAGCCCCTGCGTCCCATCTCGGCGAATTCGCTTCATGCCATCTTC CGCTCGGAAGAGGAGCAGCCAGCAAAGCAAACGGCGAGTATCGTGTCCGAGTCGGTTCGCAGCGATGATGACGAG CCCGCTACGTGTCGGTCCAGCATGCTTTCTGATGCGTACAGCGAGCAGGAGATTATGTCCATGCTCATGACGGAT GAAAGGGCACTTCCAAAAACGCCTGCTCCCGCGCTGGGCAACACCATCGCTCAGCTTCGACGAATGAATAGCGTC GTCAGCGATGTCTCGTCCACCACCACGGCTACTACAAACATGGTCAACGACCGCATTGCTGATTCGCCTACGCTG CCAAGCCACTTCAGCGGCCAGCCTTCGGTTGCGCCGCCGAGGCCCATGATGCCGCGGCCTGGAGCGAATGGGAAG AGGCATTATTTCAATATTGGCGGTGGTCGGAGACCAGAGACTAGGCGACGCGGTAACGACGCCGATGGGGGTCTT GCGGGCTTGAGGCGTTCTGTTGAGCTGTCTTCTGCCGCTCAGAGCAGTCCTCGTTCGCCTGGCATCGTGAGGTAA |
Transcript | >Ophun1|5817 ATGACGCCCCGCCTCACCGCCCGAGGCCTCGAGCTCGGCAGCAGCCTCAGCCTCGGCTGGCTGCTGATCATCATC CTCGGCGGCGGCGTAATCGTCTTCACGGGTCTAGGCCTAGGACTGGCCTGGCGACTGAAGCGAATCCGACGGCAA CGACAGCAGCAGCGGGATCCGGACATGCGGATGGGTGTGTACAGCGGCGAGACCTCGCGGACGAGGCTTACAAAG ATGTCGGGTGGCTATCTGCCTGCTCTGTCGAGTGGAGGTCCCGAGACGCAACTCACCCCTACGCCGCCCCCCATC CTCAAGCAACCGCAAAGCCCGACGCGGATGCATCTCCGCAGCCCGGTGAGCCTGCAGCAGCGCGGCCCGCCCGTT GAGAGAGAGAGGGATCAGCGTGGACGGCTTCCGCTTTCGCAGTTTAGCCCGGAGCGGAATCATGGGCGTGAGGAG CGGGTTGGGGCGCCTCAGCTTCCGCGGTTGAGTCCTCAGCGGGAACAGGGGCAGGGGCAGGGGCAGCATCTTAGT ATGCTGCAGCTTCCGCAGTTGAGTCCTGGGCGGAACTTGGTTGTTGAGCAGCGTCGCAGTGCGCCTCAGCTTCCG CAGCTTAGTCCTCAGCGAAGCCAGCAGCAACTTCGCTCCCCGCAGCTTCGCCCTCAGCGAGATCAGGTACAGGAG CAGAATCTCGGTGCGGCTCAGCAGTCGAAATTCGGTCCTGTTTGGAGTTTAGCTCACGAGGAGCAACGGAGTGCG CCGCAGCTTCCGCAACTCAGCACTCGACGAGACCAGCTTCACGAGGAGCGTCACAGTCCTGTTCGCAGTTCAGCT CTCGAGCTCAGCCCTCAACGAGACCAACCTCACGAGCAGCATCACAGTCCTGTCCGTGGTTCAGCTCACGAGCTG CTACTTCGCTCCCCCAAGCTCCCGCAACTCATCCCTGTTCGGAGTTCGGCTCACGAGCAGCAACTGAGTCCTCAA CGAGACCAATTTCACGAGCAGCAACTCCGCTCCCCCAAGCTCCCGCAACTCATCCCTGTCCGCACTCCAGCTCAC GAGCCGCAACCGAATCCAGTCCGAACCTCAGCTCACGAGCAACTCAGCCCCCCCCAGCTCCCCCCCCTCAGCCCC CAGCGAGCTCAAGCCCGCGAACAGCAACTCAACTCCCTCCCAACACCACAACTCAGCCCCATCCAACCCCAACTC CCCAGCAGCCCCGAAACTCCCTCCCCCCAACACTCATCCTTCTCCCCCCTCCAACATGAAAACTTCAGCCCCGTT CGCTTCACCATCCCGAACCCCCAATTCAGTTCCATTCGCAAACCCAACCTCACCTCCAACGACGAGCAAGCCACT CAAAAACCCCAACTCACAACCCCTTCACAACCACAACCACAACCTCCTCCCCTCCCCTCTCGCGCCCCCACGGTG AAACCAAAAGCAACTCCGTCAGGCCCCCGCCCCCTCCGACGCATCAAGACGCTCTCGACCGGGAAACCAGATCGC GAAAGCAGCCCTTCGCCTACTCCCACTTCCAAGCCCCTGCGTCCCATCTCGGCGAATTCGCTTCATGCCATCTTC CGCTCGGAAGAGGAGCAGCCAGCAAAGCAAACGGCGAGTATCGTGTCCGAGTCGGTTCGCAGCGATGATGACGAG CCCGCTACGTGTCGGTCCAGCATGCTTTCTGATGCGTACAGCGAGCAGGAGATTATGTCCATGCTCATGACGGAT GAAAGGGCACTTCCAAAAACGCCTGCTCCCGCGCTGGGCAACACCATCGCTCAGCTTCGACGAATGAATAGCGTC GTCAGCGATGTCTCGTCCACCACCACGGCTACTACAAACATGGTCAACGACCGCATTGCTGATTCGCCTACGCTG CCAAGCCACTTCAGCGGCCAGCCTTCGGTTGCGCCGCCGAGGCCCATGATGCCGCGGCCTGGAGCGAATGGGAAG AGGCATTATTTCAATATTGGCGGTGGTCGGAGACCAGAGACTAGGCGACGCGGTAACGACGCCGATGGGGGTCTT GCGGGCTTGAGGCGTTCTGTTGAGCTGTCTTCTGCCGCTCAGAGCAGTCCTCGTTCGCCTGGCATCGTGAGGTAA |
Gene | >Ophun1|5817 ATGACGCCCCGCCTCACCGCCCGAGGCCTCGAGCTCGGCAGCAGCCTCAGCCTCGGCTGGCTGCTGATCATCATC CTCGGCGGCGGCGTAATCGTCTTCACGGGTCTAGGCCTAGGACTGGCCTGGCGACTGAAGCGAATCCGACGGCAA CGACAGCAGCAGCGGGATCCGGACATGCGGATGGGTGTGTACAGCGGCGAGACCTCGCGGACGAGGCTTACAAAG ATGTCGGGTGGCTATCTGCCTGCTCTGTCGAGTGGAGGGTCTTTGGGGTTTGCGTCTGAGGAGGAGGGGGGGGTT GTTAAGGAGGGGAGGATTGGGATTCCGGCTGCGGCGAAGATGGTGAGGAAGTCGGTTACTGATTCGGATTTGCGG CTTATTCTGCGGTCTACGGATGAGAGGTTACGGACTCGCAGTCAAAGTCCCAGCAAGACTCAGGCGACCAGCGCG CCAACGTCACCTACGAAGACAACGACGACGTCCTCCTCCTCACCGTGCAGACAACAACAACTTTCATCAACCAAC GCGACGGACGCGCTTCTCGCGCTGGCGACGAATCAGCTGGATGATGCGGAGAGGGGGGAGTGGCAGAGTAGGTTG AGTCCGGCGCGGGGGGGGTCGCCGCGGAGGAGGTCGAGGGGGAGTTCGCTCTCGAGTACGCTCTCTACGCTTTAT AGTGTTGGGGAGGAGGGGGAGAAGGAGGAGGGGAATGGGGAGAGGGCTGGGATGAGGGATCATGTTTACTTTCAC AAGGTGGGGAGTTCTGTTCAGGGGGCGAGGGTTGGGGTGGTGAAGCTGGGTCAACAGCAGCAGGGCAGTCCAGCC CAACTCCCGGCTCAGCAGAGACTCAGCCAGCTACAGCCTCAACAGAGGCTCAGCCCAGTTCAGCAACAACCTGCA ACAAGACCAAGTCCATTTCAACACCCTCAACGAGCCCCACCGATGCAACAACCCCCCCCCCGAAACAACCCCATC CAACTCAGTCCCGAGACGCAACTCACCCCTACGCCGCCCCCCATCCTCAAGCAACCGCAAAGCCCGACGCGGATG CATCTCCGCAGCCCGGTGAGCCTGCAGCAGCGCGGCCCGCCCGTTGAGAGAGAGAGGGATCAGCGTGGACGGCTT CCGCTTTCGCAGTTTAGCCCGGAGCGGAATCATGGGCGTGAGGAGCGGGTTGGGGCGCCTCAGCTTCCGCGGTTG AGTCCTCAGCGGGAACAGGGGCAGGGGCAGGGGCAGCATCTTAGTATGCTGCAGCTTCCGCAGTTGAGTCCTGGG CGGAACTTGGTTGTTGAGCAGCGTCGCAGTGCGCCTCAGCTTCCGCAGCTTAGTCCTCAGCGAAGCCAGCAGCAA CTTCGCTCCCCGCAGCTTCGCCCTCAGCGAGATCAGGTACAGGAGCAGAATCTCGGTGCGGCTCAGCAGTCGAAA TTCGGTCCTGTTTGGAGTTTAGCTCACGAGGAGCAACGGAGTGCGCCGCAGCTTCCGCAACTCAGCACTCGACGA GACCAGCTTCACGAGGAGCGTCACAGTCCTGTTCGCAGTTCAGCTCTCGAGCTCAGCCCTCAACGAGACCAACCT CACGAGCAGCATCACAGTCCTGTCCGTGGTTCAGCTCACGAGCTGCTACTTCGCTCCCCCAAGCTCCCGCAACTC ATCCCTGTTCGGAGTTCGGCTCACGAGCAGCAACTGAGTCCTCAACGAGACCAATTTCACGAGCAGCAACTCCGC TCCCCCAAGCTCCCGCAACTCATCCCTGTCCGCACTCCAGCTCACGAGCCGCAACCGAATCCAGTCCGAACCTCA GCTCACGAGCAACTCAGCCCCCCCCAGCTCCCCCCCCTCAGCCCCCAGCGAGCTCAAGCCCGCGAACAGCAACTC AACTCCCTCCCAACACCACAACTCAGCCCCATCCAACCCCAACTCCCCAGCAGCCCCGAAACTCCCTCCCCCCAA CACTCATCCTTCTCCCCCCTCCAACATGAAAACTTCAGCCCCGTTCGCTTCACCATCCCGAACCCCCAATTCAGT TCCATTCGCAAACCCAACCTCACCTCCAACGACGAGCAAGCCACTCAAAAACCCCAACTCACAACCCCTTCACAA CCACAACCACAACCTCCTCCCCTCCCCTCTCGCGCCCCCACGGTGAAACCAAAAGCAACTCCGTCAGGCCCCCGC CCCCTCCGACGCATCAAGACGCTCTCGACCGGGAAACCAGATCGCGAAAGCAGCCCTTCGCCTACTCCCACTTCC AAGCCCCTGCGTCCCATCTCGGCGAATTCGCTTCATGCCATCTTCCGCTCGGAAGAGGAGCAGCCAGCAAAGCAA ACGGCGAGTATCGTGTCCGAGTCGGTTCGCAGCGATGATGACGAGCCCGCTACGTGTCGGTCCAGCATGCTTTCT GATGCGTACAGCGAGCAGGAGATTATGTCCATGCTCATGACGGATGAAAGGGCACTTCCAAAAACGCCTGCTCCC GCGCTGGGCAACACCATCGCTCAGCTTCGACGAATGAATAGCGTCGTCAGCGATGTCTCGTCCACCACCACGGCT ACTACAAACATGGTCAACGACCGCATTGCTGATTCGCCTACGCTGCCAAGCCACTTCAGCGGCCAGCCTTCGGTT GCGCCGCCGAGGCCCATGATGCCGCGGCCTGGAGCGAATGGGAAGAGGCATTATTTCAATATTGGCGGTGGTCGG AGACCAGAGACTAGGCGACGCGGTAACGACGCCGATGGGGGTCTTGCGGGCTTGAGGCGTTCTGTTGAGCTGTCT TCTGCCGCTCAGAGCAGTCCTCGTTCGCCTGGCATCGTGAGGTAA |