© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5809 |
| Gene name | |
| Location | Contig_6:8117..9020 |
| Strand | + |
| Gene length (bp) | 903 |
| Transcript length (bp) | 762 |
| Coding sequence length (bp) | 762 |
| Protein length (aa) | 254 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20238 | DUF6595 | Family of unknown function (DUF6595) | 1.1E-18 | 19 | 157 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 15 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 189 | 211 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5809 MLLLRLGFVASVAAQQHVGPAAFLWPPDRVWGSAAGHTAPCGTTRGTLKSPSLSEPVRLPPDKDGAEADKGADPR SDADFSLLTSPSVLRNSDPGHSCLAVADAAPSARAGDKATLQIRYSSGYNDPNQEFLYACTDIIFVRPERFRPPS LSCFNASVVETDDDDMPWPDGFAAPADDGDDGRLSGGAIAGIVVAAVALTLLLLTAALLLYRRRQQRLRSLRQQN SLRAVKWDEQAAAQGPDSPGSVKLRDLS* |
| Coding | >Ophun1|5809 ATGCTTCTTCTCCGTCTTGGTTTCGTCGCTTCGGTGGCTGCTCAGCAGCATGTCGGCCCTGCCGCCTTTTTGTGG CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACACACGGCTCCGTGCGGGACGACTCGTGGGACGCTCAAATCG CCATCTCTTTCCGAGCCGGTCCGCCTCCCCCCGGACAAAGACGGAGCCGAAGCTGACAAGGGAGCAGACCCCAGG TCCGACGCCGACTTCTCCCTTCTGACAAGCCCCTCCGTCCTCCGGAACAGCGACCCGGGCCACAGCTGCCTCGCC GTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATCCGGTATAGCTCCGGCTACAAC GATCCAAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCCGAGCGCTTCCGTCCGCCGTCG CTGTCGTGCTTCAACGCCTCTGTCGTCGAGACGGATGACGACGATATGCCTTGGCCTGATGGCTTTGCTGCTCCG GCTGATGACGGGGACGACGGTCGGCTTTCAGGGGGTGCTATTGCGGGAATCGTTGTTGCGGCCGTTGCCTTGACC TTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTTGCGCAGCTTGCGACAGCAGAAC TCGCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCAAGGGCCTGATTCTCCGGGCAGCGTGAAACTGAGG GACCTGTCGTAG |
| Transcript | >Ophun1|5809 ATGCTTCTTCTCCGTCTTGGTTTCGTCGCTTCGGTGGCTGCTCAGCAGCATGTCGGCCCTGCCGCCTTTTTGTGG CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACACACGGCTCCGTGCGGGACGACTCGTGGGACGCTCAAATCG CCATCTCTTTCCGAGCCGGTCCGCCTCCCCCCGGACAAAGACGGAGCCGAAGCTGACAAGGGAGCAGACCCCAGG TCCGACGCCGACTTCTCCCTTCTGACAAGCCCCTCCGTCCTCCGGAACAGCGACCCGGGCCACAGCTGCCTCGCC GTCGCCGATGCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATCCGGTATAGCTCCGGCTACAAC GATCCAAACCAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCCGAGCGCTTCCGTCCGCCGTCG CTGTCGTGCTTCAACGCCTCTGTCGTCGAGACGGATGACGACGATATGCCTTGGCCTGATGGCTTTGCTGCTCCG GCTGATGACGGGGACGACGGTCGGCTTTCAGGGGGTGCTATTGCGGGAATCGTTGTTGCGGCCGTTGCCTTGACC TTGTTGCTACTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTTGCGCAGCTTGCGACAGCAGAAC TCGCTTCGTGCTGTCAAGTGGGATGAGCAGGCTGCCGCTCAAGGGCCTGATTCTCCGGGCAGCGTGAAACTGAGG GACCTGTCGTAG |
| Gene | >Ophun1|5809 ATGCTTCTTCTCCGTCTTGGTTTCGTCGCTTCGGTGGCTGCTCAGCAGCATGTCGGCCCTGCCGCCTTTTTGTGG CCTCCGGACCGGGTGTGGGGGTCGGCGGCCGGACACACGGCTCCGTGCGGGTCCGTGACGGGCGCGGGGAACCGG ACCGAGTTTCCGCTACGTGAGAACCTCATCTGTTTGTCGTCTCTGCTTCTGCTCCGTTACTGATGGATAAGCAAC GACGACTCATAGGAAACGCAAGAGTTGCTCTCGTCGCTCAGGACGACTCGTGGGACGCTCAAATCGCCATCTCTT TCCGAGCCGGTCCGCCTCCCCCCGGACAAAGACGGAGCCGAAGCTGACAAGGGAGCAGACCCCAGGTCCGACGCC GACTTCTCCCTTCTGACAAGCCCCTCCGTCCTCCGGAACAGCGACCCGGGCCACAGCTGCCTCGCCGTCGCCGAT GCCGCTCCCTCGGCCCGCGCCGGAGATAAGGCCACGCTCCAGATCCGGTATAGCTCCGGCTACAACGATCCAAAC CAGGAGTTTCTCTACGCCTGCACCGACATCATCTTCGTTCGGCCCGAGCGCTTCCGTCCGCCGTCGCTGTCGTGC TTCAACGCCTCTGTCGTCGAGACGGATGACGACGATATGCCTTGGCCTGATGGCTTTGCTGCTCCGGCTGATGAC GGGGACGACGGTCGGCTTTCAGGGGGTGCTATTGCGGGAATCGTTGTTGCGGCCGTTGCCTTGACCTTGTTGCTA CTCACCGCGGCGCTGTTGCTCTATCGTCGTAGACAGCAGCGGTTGCGCAGCTTGCGACAGCAGAACTCGCTTCGT GCTGTCAAGTGGGATGAGCAGGCTGCCGCTCAAGGGCCTGATTCTCCGGGCAGCGTGAAACTGAGGGACCTGTCG TAG |