© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|5785 |
| Gene name | |
| Location | Contig_595:5432..8466 |
| Strand | - |
| Gene length (bp) | 3034 |
| Transcript length (bp) | 2250 |
| Coding sequence length (bp) | 2250 |
| Protein length (aa) | 750 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06884 | DUF1264 | Protein of unknown function (DUF1264) | 3.0E-76 | 27 | 200 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 367 | 389 | 22 |
| 2 | 455 | 474 | 19 |
| 3 | 489 | 511 | 22 |
| 4 | 540 | 562 | 22 |
| 5 | 566 | 585 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 813 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5785 MCSASQAAYIICTSAVHCSNGRPWRNFAPLKNVCAHLNAFHAYAHDATRSVETNHYCAHLNDQVRQCLLYDSAER GARLIGIEYMITPQLYESLPQSERTLWHSHVYEVKSGMLIMPNSSLMPATAWNLAETREMKQVVELYGKAYHLWQ TDRGDALPLGEPKLMTSFTADGQLDWTAVAKRDDKFGTDYRAKREARRDISAPEIHADADSAWKMEGSRQGPSGW PKQAMTLQEQQCIHDGRCASMADGGAVPGRDTGEEDFKVEDAVVAVANEGDGEDDDDDDDDDDDDDDDEDEDDED DRQDDQNESNSDKSTRVRLTRSSPSSHFRLAPATRLENNLPFAVGLLELANAGDFAANVWNQIPVPLYAMILMAL GGTLALIMSFVALYDLGRAWANVRFLRSQRRKLHRRRRRLPSSSAAAAAAHDARLWSASLLAMSFRELWSEVINR LAMDGLMGAGALLIATGTYMAMAGGDEAVFNASNILSGYLGNTPLALFALVNSSWAIFLAWTAQSHVRAVRRRCL SPAALQLVTRRSRCVQIFSAVNGSAAVVGGVGSMLTATRWWAYVLLAPVVVSSIFCNVWWRRRVGYTRCRARLSS PTSLESHLEFASWAAKTIQDSKKKEPNPPLTTIITGSATDNTAHLLRWLRRHDLVPDFCVRLLADPILYEALVSD PQAKDLVLDLPDILALPSALHPRLRDVADECFAAVGVEHFRHRVRHLAELLGTYCTVAARAPTDEEVAEKGVGS* |
| Coding | >Ophun1|5785 ATGTGCTCAGCGTCCCAAGCAGCCTACATCATCTGCACCTCGGCTGTCCACTGCAGCAATGGACGGCCGTGGCGT AACTTTGCGCCCCTCAAGAACGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCCCACGACGCCACCCGCAGC GTGGAGACGAACCACTACTGCGCCCACCTCAACGATCAAGTCCGTCAGTGCCTCTTGTACGACTCGGCCGAGCGC GGCGCCCGCCTCATCGGGATAGAATACATGATCACCCCCCAGCTATACGAGAGCCTGCCGCAGTCAGAGCGCACC CTCTGGCATTCTCACGTCTACGAAGTCAAATCCGGCATGCTCATCATGCCCAACAGCAGCCTCATGCCAGCCACA GCATGGAACCTAGCCGAGACGCGCGAGATGAAACAAGTCGTCGAGCTCTACGGCAAGGCCTACCACCTCTGGCAG ACGGACCGGGGCGACGCCCTCCCGCTAGGAGAGCCCAAGCTGATGACGAGCTTCACGGCTGACGGCCAGCTCGAC TGGACGGCCGTCGCCAAGCGGGACGACAAGTTCGGGACCGACTATCGGGCGAAGCGAGAGGCGAGGCGGGATATT TCCGCGCCCGAGATTCACGCTGATGCCGATAGCGCGTGGAAGATGGAAGGTAGCCGCCAGGGCCCCTCGGGGTGG CCTAAGCAGGCCATGACGCTACAGGAGCAGCAGTGCATCCACGACGGGCGCTGCGCCTCCATGGCAGACGGGGGG GCTGTGCCGGGCCGAGACACGGGGGAGGAGGACTTCAAGGTTGAGGATGCGGTTGTTGCTGTTGCCAATGAGGGG GATGGCGAGGACGACGACGACGACGACGATGATGATGACGATGACGACGATGACGAAGACGAAGATGACGAGGAC GACCGCCAAGACGATCAAAACGAATCCAACAGCGATAAATCAACCCGCGTCCGCCTCACCCGCTCCTCCCCATCC TCTCACTTCCGCCTCGCCCCAGCAACCCGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCC AACGCAGGCGACTTCGCCGCCAACGTATGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTCATGGCCCTC GGCGGAACCCTCGCCCTCATCATGAGCTTCGTCGCCCTCTACGACCTCGGCCGCGCCTGGGCCAACGTCCGCTTC CTCCGAAGCCAGCGCCGAAAACTTCACCGCCGACGCAGACGCCTCCCTTCTTCTTCCGCCGCCGCAGCAGCAGCA CACGATGCGCGCCTCTGGTCCGCTTCCCTGCTGGCAATGTCCTTTCGTGAGCTTTGGAGCGAGGTCATCAATAGG CTCGCTATGGATGGCCTTATGGGTGCCGGCGCTCTGCTCATCGCTACGGGCACGTACATGGCCATGGCAGGCGGC GACGAAGCCGTCTTCAACGCCAGCAACATCCTTTCCGGATACCTGGGCAACACCCCCCTCGCCCTCTTCGCCCTC GTCAACTCCTCGTGGGCCATCTTCCTCGCCTGGACCGCCCAATCGCACGTCCGCGCCGTTCGAAGACGATGTCTC TCCCCCGCCGCCCTCCAGCTCGTCACCCGACGCAGCCGCTGCGTGCAGATCTTCTCCGCCGTCAATGGTTCCGCC GCTGTTGTTGGAGGTGTCGGCTCTATGCTGACGGCGACCAGGTGGTGGGCCTACGTTCTTCTCGCCCCCGTCGTC GTCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTGGGATATACCCGTTGCCGAGCACGACTCTCATCC CCAACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCAAAAACCATCCAAGACTCCAAAAAGAAAGAG CCCAACCCCCCCCTGACAACCATCATCACCGGCTCCGCAACCGACAACACAGCCCACCTCCTCCGCTGGCTCCGC CGCCACGACCTCGTCCCCGATTTCTGCGTCCGTCTCCTCGCCGACCCGATCCTCTACGAGGCGCTCGTCTCCGAC CCCCAGGCGAAAGACCTCGTCCTCGACCTACCCGATATCCTGGCCCTGCCTTCGGCGCTGCATCCGCGATTGCGT GACGTGGCGGACGAGTGCTTCGCTGCCGTCGGCGTGGAGCATTTCCGTCATCGGGTGAGGCATCTGGCCGAGTTG CTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTACGGATGAGGAGGTTGCCGAAAAGGGGGTCGGTAGCTGA |
| Transcript | >Ophun1|5785 ATGTGCTCAGCGTCCCAAGCAGCCTACATCATCTGCACCTCGGCTGTCCACTGCAGCAATGGACGGCCGTGGCGT AACTTTGCGCCCCTCAAGAACGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCCCACGACGCCACCCGCAGC GTGGAGACGAACCACTACTGCGCCCACCTCAACGATCAAGTCCGTCAGTGCCTCTTGTACGACTCGGCCGAGCGC GGCGCCCGCCTCATCGGGATAGAATACATGATCACCCCCCAGCTATACGAGAGCCTGCCGCAGTCAGAGCGCACC CTCTGGCATTCTCACGTCTACGAAGTCAAATCCGGCATGCTCATCATGCCCAACAGCAGCCTCATGCCAGCCACA GCATGGAACCTAGCCGAGACGCGCGAGATGAAACAAGTCGTCGAGCTCTACGGCAAGGCCTACCACCTCTGGCAG ACGGACCGGGGCGACGCCCTCCCGCTAGGAGAGCCCAAGCTGATGACGAGCTTCACGGCTGACGGCCAGCTCGAC TGGACGGCCGTCGCCAAGCGGGACGACAAGTTCGGGACCGACTATCGGGCGAAGCGAGAGGCGAGGCGGGATATT TCCGCGCCCGAGATTCACGCTGATGCCGATAGCGCGTGGAAGATGGAAGGTAGCCGCCAGGGCCCCTCGGGGTGG CCTAAGCAGGCCATGACGCTACAGGAGCAGCAGTGCATCCACGACGGGCGCTGCGCCTCCATGGCAGACGGGGGG GCTGTGCCGGGCCGAGACACGGGGGAGGAGGACTTCAAGGTTGAGGATGCGGTTGTTGCTGTTGCCAATGAGGGG GATGGCGAGGACGACGACGACGACGACGATGATGATGACGATGACGACGATGACGAAGACGAAGATGACGAGGAC GACCGCCAAGACGATCAAAACGAATCCAACAGCGATAAATCAACCCGCGTCCGCCTCACCCGCTCCTCCCCATCC TCTCACTTCCGCCTCGCCCCAGCAACCCGCCTAGAAAACAACCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCC AACGCAGGCGACTTCGCCGCCAACGTATGGAACCAAATCCCCGTCCCCCTCTACGCCATGATCCTCATGGCCCTC GGCGGAACCCTCGCCCTCATCATGAGCTTCGTCGCCCTCTACGACCTCGGCCGCGCCTGGGCCAACGTCCGCTTC CTCCGAAGCCAGCGCCGAAAACTTCACCGCCGACGCAGACGCCTCCCTTCTTCTTCCGCCGCCGCAGCAGCAGCA CACGATGCGCGCCTCTGGTCCGCTTCCCTGCTGGCAATGTCCTTTCGTGAGCTTTGGAGCGAGGTCATCAATAGG CTCGCTATGGATGGCCTTATGGGTGCCGGCGCTCTGCTCATCGCTACGGGCACGTACATGGCCATGGCAGGCGGC GACGAAGCCGTCTTCAACGCCAGCAACATCCTTTCCGGATACCTGGGCAACACCCCCCTCGCCCTCTTCGCCCTC GTCAACTCCTCGTGGGCCATCTTCCTCGCCTGGACCGCCCAATCGCACGTCCGCGCCGTTCGAAGACGATGTCTC TCCCCCGCCGCCCTCCAGCTCGTCACCCGACGCAGCCGCTGCGTGCAGATCTTCTCCGCCGTCAATGGTTCCGCC GCTGTTGTTGGAGGTGTCGGCTCTATGCTGACGGCGACCAGGTGGTGGGCCTACGTTCTTCTCGCCCCCGTCGTC GTCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGTGGGATATACCCGTTGCCGAGCACGACTCTCATCC CCAACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGCCGCAAAAACCATCCAAGACTCCAAAAAGAAAGAG CCCAACCCCCCCCTGACAACCATCATCACCGGCTCCGCAACCGACAACACAGCCCACCTCCTCCGCTGGCTCCGC CGCCACGACCTCGTCCCCGATTTCTGCGTCCGTCTCCTCGCCGACCCGATCCTCTACGAGGCGCTCGTCTCCGAC CCCCAGGCGAAAGACCTCGTCCTCGACCTACCCGATATCCTGGCCCTGCCTTCGGCGCTGCATCCGCGATTGCGT GACGTGGCGGACGAGTGCTTCGCTGCCGTCGGCGTGGAGCATTTCCGTCATCGGGTGAGGCATCTGGCCGAGTTG CTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTACGGATGAGGAGGTTGCCGAAAAGGGGGTCGGTAGCTGA |
| Gene | >Ophun1|5785 ATGTGCTCAGCGTCCCAAGCAGCCTACATCATCTGCACCTCGGCTGTCCACTGCAGCAATGGACGGCCGTGGCGT GTCATTATGACGACGACGACGAGGGGATACGAAAGTGATACAACTCGTGCAAGAGACGGGATCATGCCGACTCGC CTTGATAGATAACTCTTCGCCTTGACACCTCCTCGTCTCGATACCTCCTCTGAATATCTCCTCGCCTCGATACCT CCTCGCAACAACATGGCCACCGAACCGCACGACGCCAAAAACACCCTCTCCACCGAAAAGACGGCCCTCAGCTCG GCCGCTTCCATGACCCAAGCAAGCGCCACGCACCGAGACCCAACAAGACCATCGCTGACCGAAACAGAACTTTGC GCCCCTCAAGAACGTCTGCGCCCATCTCAACGCCTTTCACGCCTACGCCCACGACGCCACCCGCAGCGTGGAGAC GAACCACTACTGCGCCCACCTCAGTACCTACCGTTCAGCCCGACCCGCTCCGCATCCTCCCAGTCCCTAACTCGC AGACAGACGATCAAGTCCGTCAGTGCCTCTTGTACGACTCGGCCGAGCGCGGCGCCCGCCTCATCGGGATAGAAT ACATGATCACCCCCCAGCTATACGAGAGCCTGCCGCAGTCAGAGCGCACCCTCTGGCATTCTCACGTCTACGAAG TCAAATCCGGCATGCTCATCATGCCCAACAGCAGCCTCATGCCAGCCACAGCATGGAACCTAGCCGAGACGCGCG AGATGAAACAAGTCGTCGAGCTCTACGGCAAGGCCTACCACCTCTGGCAGACGGACCGGGGCGACGCCCTCCCGC TAGGAGAGCCCAAGCTGATGACGAGCTTCACGGCTGACGGCCAGCTCGACTGGACGGCCGTCGCCAAGCGGGACG ACAAGTTCGGGACCGACTATCGGGCGAAGCGAGAGGCGAGGCGGGATATTTCCGCGCCCGAGATTCACGCTGATG CCGATAGCGCGTGGAAGATGGAAGGTGTTTCTGCCTGGAAGACGGAGGCAGGTTGAGGGGAAAGCAATGCATGAT TTGTCTATCCCATGTGTTGTTGGCCGCCGTGAAGCTTGGATGATTTCTCAACTCGGCAGACGCCGTCAGCAAATC CCAACCCTGTCAGCAAAGACTGAGGGACTTTTGCCGATTTTTTTCTTTTTTTTGTTCTTCTGGTCCTCTTGTCCG TGTCCTCCCAGCTGACGGCCATCGCCTTCCACAAGTCGCTCTCCTCCCGTAGTAACGCGTATTCGCACACCAACA AACCTCACCCCCCAATTGCCAATCAAAACCACGCCCATCCAACAAAACTCTTCGTTTAAAAAAAAAAAATACACC GCAAAACCTTCGCCCAGGAAACCCGACATCCGGAAGACAGAGAGAGAGAGAGAGAGAGAGAAACACCCCACAGCC CCCGTTCCAGAGCCGCCAGGGCCCCTCGGGGTGGCCTAAGCAGGCCATGACGCTACAGGAGCAGCAGTGCATCCA CGACGGGCGCTGCGCCTCCATGGCAGACGGGGGGGCTGTGCCGGGCCGAGACACGGGGGAGGAGGACTTCAAGGT TGAGGATGCGGTTGTTGCTGTTGCCAATGAGGGGGATGGCGAGGACGACGACGACGACGACGATGATGATGACGA TGACGACGATGACGAAGACGAAGATGACGAGGACGACCGCCAAGACGATCAAAACGAATCCAACAGCGATAAATC AACCCGCGTCCGCCTCACCCGCTCCTCCCCATCCTCTCACTTCCGCCTCGCCCCAGCAACCCGCCTAGAAAACAA CCTCCCCTTCGCCGTCGGCCTCCTCGAGCTCGCCAACGCAGGCGACTTCGCCGCCAACGTATGGAACCAAATCCC CGTCCCCCTCTACGCCATGATCCTCATGGCCCTCGGCGGAACCCTCGCCCTCATCATGAGCTTCGTCGCCCTCTA CGACCTCGGCCGCGCCTGGGCCAACGTCCGCTTCCTCCGAAGCCAGCGCCGAAAACTTCACCGCCGACGCAGACG CCTCCCTTCTTCTTCCGCCGCCGCAGCAGCAGCACACGATGCGCGCCTCTGGTCCGCTTCCCTGCTGGCAATGTC CTTTCGTGAGCTTTGGAGCGAGGTCATCAATAGGCTCGCTATGGATGGCCTTATGGGTGCCGGCGCTCTGCTCAT CGCTACGGGCACGTACATGGCCATGGCAGGCGGCGACGAAGCCGTCTTCAACGCCAGCAACATCCTTTCCGGATA CCTGGGCAACACCCCCCTCGCCCTCTTCGCCCTCGTCAACTCCTCGTGGGCCATCTTCCTCGCCTGGACCGCCCA ATCGCACGTCCGCGCCGTTCGAAGACGATGTCTCTCCCCCGCCGCCCTCCAGCTCGTCACCCGACGCAGCCGCTG CGTGCAGATCTTCTCCGCCGTCAATGGTTCCGCCGCTGTTGTTGGAGGTGTCGGCTCTATGCTGACGGCGACCAG GTGGTGGGCCTACGTTCTTCTCGCCCCCGTCGTCGTCTCCAGCATCTTCTGCAACGTCTGGTGGAGGAGGAGAGT GGGATATACCCGTTGCCGAGCACGACTCTCATCCCCAACCTCTCTAGAATCCCACCTCGAATTCGCCTCCTGGGC CGCAAAAACCATCCAAGACTCCAAAAAGAAAGAGCCCAACCCCCCCCTGACAACCATCATCACCGGCTCCGCAAC CGACAACACAGCCCACCTCCTCCGCTGGCTCCGCCGCCACGACCTCGTCCCCGATTTCTGCGTCCGTCTCCTCGC CGACCCGATCCTCTACGAGGCGCTCGTCTCCGACCCCCAGGCGAAAGACCTCGTCCTCGACCTACCCGATATCCT GGCCCTGCCTTCGGCGCTGCATCCGCGATTGCGTGACGTGGCGGACGAGTGCTTCGCTGCCGTCGGCGTGGAGCA TTTCCGTCATCGGGTGAGGCATCTGGCCGAGTTGCTGGGGACGTATTGCACTGTTGCTGCGAGGGCGCCTACGGA TGAGGAGGTTGCCGAAAAGGGGGTCGGTAGCTGA |