© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|57 |
| Gene name | |
| Location | Contig_1:140639..142181 |
| Strand | - |
| Gene length (bp) | 1542 |
| Transcript length (bp) | 1236 |
| Coding sequence length (bp) | 1236 |
| Protein length (aa) | 412 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00647 | EF1G | Elongation factor 1 gamma, conserved domain | 1.3E-42 | 249 | 355 |
| PF00043 | GST_C | Glutathione S-transferase, C-terminal domain | 1.1E-11 | 92 | 196 |
| PF02798 | GST_N | Glutathione S-transferase, N-terminal domain | 7.1E-07 | 4 | 74 |
| PF13410 | GST_C_2 | Glutathione S-transferase, C-terminal domain | 1.6E-06 | 130 | 190 |
| PF14497 | GST_C_3 | Glutathione S-transferase, C-terminal domain | 1.5E-04 | 131 | 196 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29547|EF1G1_YEAST | Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAM1 PE=1 SV=2 | 1 | 411 | 2.0E-106 |
| sp|P36008|EF1G2_YEAST | Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TEF4 PE=1 SV=1 | 1 | 411 | 1.0E-97 |
| sp|P40921|EF1G_SCHPO | Elongation factor 1-gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tef3 PE=1 SV=1 | 1 | 411 | 2.0E-82 |
| sp|P26641|EF1G_HUMAN | Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3 | 1 | 411 | 2.0E-77 |
| sp|Q4R7H5|EF1G_MACFA | Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1 | 1 | 411 | 1.0E-76 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29547|EF1G1_YEAST | Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAM1 PE=1 SV=2 | 1 | 411 | 2.0E-106 |
| sp|P36008|EF1G2_YEAST | Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TEF4 PE=1 SV=1 | 1 | 411 | 1.0E-97 |
| sp|P40921|EF1G_SCHPO | Elongation factor 1-gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tef3 PE=1 SV=1 | 1 | 411 | 2.0E-82 |
| sp|P26641|EF1G_HUMAN | Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3 | 1 | 411 | 2.0E-77 |
| sp|Q4R7H5|EF1G_MACFA | Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1 | 1 | 411 | 1.0E-76 |
| sp|A2Q127|EF1G_HORSE | Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1 | 1 | 411 | 4.0E-76 |
| sp|P29694|EF1G_RABIT | Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3 | 1 | 411 | 5.0E-76 |
| sp|Q9D8N0|EF1G_MOUSE | Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3 | 1 | 411 | 9.0E-76 |
| sp|Q68FR6|EF1G_RAT | Elongation factor 1-gamma OS=Rattus norvegicus GN=Eef1g PE=2 SV=3 | 1 | 411 | 1.0E-74 |
| sp|Q29387|EF1G_PIG | Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2 | 6 | 411 | 5.0E-74 |
| sp|Q3SZV3|EF1G_BOVIN | Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1 | 1 | 411 | 2.0E-71 |
| sp|P26642|EF1GA_XENLA | Elongation factor 1-gamma-A OS=Xenopus laevis GN=eef1g-a PE=1 SV=1 | 1 | 411 | 1.0E-70 |
| sp|P12261|EF1G_ARTSA | Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3 | 1 | 411 | 4.0E-70 |
| sp|Q6PE25|EF1G_DANRE | Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1 | 1 | 411 | 4.0E-70 |
| sp|Q90YC0|EF1G_CARAU | Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1 | 1 | 411 | 1.0E-69 |
| sp|Q91375|EF1GB_XENLA | Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-b PE=2 SV=1 | 1 | 411 | 2.0E-66 |
| sp|O04487|EF1G1_ARATH | Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1 | 38 | 388 | 3.0E-55 |
| sp|Q00717|STCT_EMENI | Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcT PE=4 SV=1 | 1 | 202 | 4.0E-55 |
| sp|Q5Z627|EF1G3_ORYSJ | Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1 | 17 | 394 | 2.0E-54 |
| sp|P54412|EF1G_CAEEL | Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=eef-1G PE=3 SV=1 | 4 | 411 | 5.0E-54 |
| sp|Q6YW46|EF1G2_ORYSJ | Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2 | 6 | 388 | 3.0E-53 |
| sp|Q9NJH0|EF1G_DROME | Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=2 SV=2 | 1 | 411 | 2.0E-52 |
| sp|Q9FUM1|EF1G_PRUAV | Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1 | 33 | 394 | 1.0E-50 |
| sp|Q9FVT2|EF1G2_ARATH | Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1 | 38 | 388 | 2.0E-50 |
| sp|Q9ZRI7|EF1G1_ORYSJ | Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1 | 17 | 388 | 2.0E-48 |
| sp|B5BP46|YP52_SCHPO | Putative glutathione S-transferase C1183.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.02c PE=3 SV=1 | 1 | 195 | 1.0E-26 |
| sp|O74830|YC12_SCHPO | Putative glutathione S-transferase C1183.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.02 PE=3 SV=1 | 1 | 204 | 4.0E-25 |
| sp|P34715|EF1G_TRYCR | Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1 | 27 | 396 | 6.0E-24 |
| sp|P42936|YG4D_YEAST | Putative elongation factor 1 gamma homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR201C PE=4 SV=3 | 1 | 198 | 3.0E-22 |
| sp|P30102|GSTY2_PICKU | Glutathione S-transferase Y-2 OS=Pichia kudriavzevii GN=GSTY2 PE=1 SV=2 | 1 | 197 | 4.0E-15 |
| sp|P49696|SYVC_TAKRU | Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1 | 84 | 210 | 3.0E-10 |
| sp|P26640|SYVC_HUMAN | Valine--tRNA ligase OS=Homo sapiens GN=VARS PE=1 SV=4 | 83 | 229 | 5.0E-10 |
| sp|Q9Z1Q9|SYVC_MOUSE | Valine--tRNA ligase OS=Mus musculus GN=Vars PE=1 SV=1 | 83 | 229 | 1.0E-09 |
| sp|P42761|GSTFA_ARATH | Glutathione S-transferase F10 OS=Arabidopsis thaliana GN=GSTF10 PE=1 SV=3 | 3 | 204 | 4.0E-09 |
| sp|Q04462|SYVC_RAT | Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2 | 83 | 220 | 4.0E-09 |
| sp|O65857|GSTF1_ORYSJ | Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2 | 26 | 196 | 1.0E-08 |
| sp|Q9SRY5|GSTF7_ARATH | Glutathione S-transferase F7 OS=Arabidopsis thaliana GN=GSTF7 PE=2 SV=3 | 12 | 196 | 2.0E-08 |
| sp|O80852|GSTF9_ARATH | Glutathione S-transferase F9 OS=Arabidopsis thaliana GN=GSTF9 PE=1 SV=1 | 2 | 207 | 2.0E-08 |
| sp|P42760|GSTF6_ARATH | Glutathione S-transferase F6 OS=Arabidopsis thaliana GN=GSTF6 PE=2 SV=2 | 12 | 196 | 4.0E-08 |
| sp|P46420|GSTF4_MAIZE | Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2 | 42 | 203 | 2.0E-07 |
| sp|P04907|GSTF3_MAIZE | Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4 | 1 | 205 | 8.0E-07 |
| sp|Q04522|GSTF_SILVU | Glutathione S-transferase OS=Silene vulgaris GN=GST PE=1 SV=3 | 12 | 196 | 1.0E-06 |
| sp|Q96324|GSTFB_ARATH | Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=1 | 42 | 160 | 2.0E-06 |
| sp|Q93112|GST1C_ANOGA | Glutathione S-transferase 1, isoform C OS=Anopheles gambiae GN=GstD1 PE=1 SV=2 | 14 | 192 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003746 | translation elongation factor activity | Yes |
| GO:0006414 | translational elongation | Yes |
| GO:0006749 | glutathione metabolic process | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0008135 | translation factor activity, RNA binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0090079 | translation regulator activity, nucleic acid binding | No |
| GO:0045182 | translation regulator activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0005488 | binding | No |
| GO:0008150 | biological_process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0034645 | cellular macromolecule biosynthetic process | No |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0006790 | sulfur compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|57 MAFGTLFTTADNPRSTAIKAIAKANNLDLKIVEIEPGNPSIEHLKANGLGKIPAFVGEDGYTLSECIAVAIYITS QNEKTTLLGKTKQDYASILKWMSFFNSEIVPPLGNWFQPLIGRMPYNKKTVEDGAKATAKAIGVVENYLIRHTYL VGERITLADLFCAALLNRGFQYFFDKQWRQQNPCVARWYDTVVSQPIYTAVAKKIDYLDKPALTNTAPKKPEQPK AAAKAAPAAAAAADDEEDAPAAPKAKHPCEALPKASFPLDEWKRHFSNNETPDALKWFWENVPLGEEYSIWRCDY KYNDELTLTFMSNNLIGGLFARLEGSRKYIFGSSSVYGENNDSVIQGAFVIRGQEYKPVFDVAPDYESYDFAKLD PKNEKDREFLENMWSWEKPVVVKGKEYAHACGKVFK* |
| Coding | >Ophun1|57 ATGGCCTTCGGCACTCTCTTCACTACCGCGGACAATCCCCGCTCGACCGCCATCAAGGCCATCGCAAAGGCCAAC AACCTCGACCTCAAGATTGTCGAGATCGAGCCTGGCAATCCCAGTATCGAGCATCTCAAGGCAAACGGGCTCGGC AAGATTCCCGCTTTTGTGGGCGAGGACGGTTACACTCTGTCCGAGTGCATTGCTGTCGCCATCTACATTACCTCT CAGAACGAGAAAACTACGCTGCTGGGGAAGACCAAGCAAGACTACGCCTCGATTCTGAAATGGATGTCCTTCTTC AACTCTGAAATTGTCCCTCCCCTGGGCAACTGGTTTCAGCCCCTCATTGGCAGGATGCCCTACAACAAGAAGACT GTCGAGGATGGCGCCAAGGCCACCGCCAAGGCCATTGGCGTCGTCGAAAACTACTTGATCCGCCACACTTACCTC GTTGGCGAGCGCATTACTCTCGCCGACTTGTTCTGTGCCGCCCTCCTGAACCGAGGCTTTCAGTACTTCTTCGAC AAGCAGTGGCGCCAGCAGAACCCCTGTGTCGCTCGCTGGTACGATACCGTCGTCAGCCAGCCCATCTACACGGCC GTCGCCAAGAAGATCGATTACCTCGACAAGCCCGCCCTCACCAACACTGCTCCTAAGAAGCCCGAGCAGCCCAAG GCCGCCGCCAAGGCCGCCCCCGCCGCTGCTGCTGCTGCCGATGACGAGGAGGACGCTCCGGCAGCTCCCAAGGCC AAGCACCCCTGCGAGGCCCTGCCCAAGGCATCGTTCCCTCTGGATGAGTGGAAGCGCCACTTCTCCAACAACGAG ACTCCCGACGCTCTCAAGTGGTTCTGGGAGAATGTTCCCCTGGGGGAGGAATATTCCATCTGGCGCTGTGATTAC AAGTACAATGATGAGCTCACCCTGACATTCATGTCCAACAACCTCATCGGCGGCCTCTTTGCTCGTCTGGAGGGC TCTCGCAAGTACATATTCGGCAGCTCCTCCGTTTACGGCGAGAACAACGATTCGGTCATTCAGGGCGCCTTTGTC ATCCGAGGTCAGGAATACAAGCCTGTATTCGACGTCGCTCCGGACTACGAGAGCTACGACTTCGCCAAGCTCGAT CCCAAGAACGAAAAAGACCGCGAGTTCCTCGAGAATATGTGGTCTTGGGAGAAACCTGTCGTTGTCAAGGGCAAA GAGTACGCTCACGCTTGCGGCAAGGTTTTCAAATAG |
| Transcript | >Ophun1|57 ATGGCCTTCGGCACTCTCTTCACTACCGCGGACAATCCCCGCTCGACCGCCATCAAGGCCATCGCAAAGGCCAAC AACCTCGACCTCAAGATTGTCGAGATCGAGCCTGGCAATCCCAGTATCGAGCATCTCAAGGCAAACGGGCTCGGC AAGATTCCCGCTTTTGTGGGCGAGGACGGTTACACTCTGTCCGAGTGCATTGCTGTCGCCATCTACATTACCTCT CAGAACGAGAAAACTACGCTGCTGGGGAAGACCAAGCAAGACTACGCCTCGATTCTGAAATGGATGTCCTTCTTC AACTCTGAAATTGTCCCTCCCCTGGGCAACTGGTTTCAGCCCCTCATTGGCAGGATGCCCTACAACAAGAAGACT GTCGAGGATGGCGCCAAGGCCACCGCCAAGGCCATTGGCGTCGTCGAAAACTACTTGATCCGCCACACTTACCTC GTTGGCGAGCGCATTACTCTCGCCGACTTGTTCTGTGCCGCCCTCCTGAACCGAGGCTTTCAGTACTTCTTCGAC AAGCAGTGGCGCCAGCAGAACCCCTGTGTCGCTCGCTGGTACGATACCGTCGTCAGCCAGCCCATCTACACGGCC GTCGCCAAGAAGATCGATTACCTCGACAAGCCCGCCCTCACCAACACTGCTCCTAAGAAGCCCGAGCAGCCCAAG GCCGCCGCCAAGGCCGCCCCCGCCGCTGCTGCTGCTGCCGATGACGAGGAGGACGCTCCGGCAGCTCCCAAGGCC AAGCACCCCTGCGAGGCCCTGCCCAAGGCATCGTTCCCTCTGGATGAGTGGAAGCGCCACTTCTCCAACAACGAG ACTCCCGACGCTCTCAAGTGGTTCTGGGAGAATGTTCCCCTGGGGGAGGAATATTCCATCTGGCGCTGTGATTAC AAGTACAATGATGAGCTCACCCTGACATTCATGTCCAACAACCTCATCGGCGGCCTCTTTGCTCGTCTGGAGGGC TCTCGCAAGTACATATTCGGCAGCTCCTCCGTTTACGGCGAGAACAACGATTCGGTCATTCAGGGCGCCTTTGTC ATCCGAGGTCAGGAATACAAGCCTGTATTCGACGTCGCTCCGGACTACGAGAGCTACGACTTCGCCAAGCTCGAT CCCAAGAACGAAAAAGACCGCGAGTTCCTCGAGAATATGTGGTCTTGGGAGAAACCTGTCGTTGTCAAGGGCAAA GAGTACGCTCACGCTTGCGGCAAGGTTTTCAAATAG |
| Gene | >Ophun1|57 ATGGCCTTCGGCACTCTCTTCACTACCGCGGTAAGTCTGGAGCTTCTACACCGCATCTCCCTGTCTCTCCTCCTA GCTGCTTCTGACCCTCCGCCTGCAGGACAATCCCCGCTCGACCGCCATCAAGGCCATCGCAAAGGCCAACAACCT CGACCTCAAGATTGTCGAGATCGAGCCTGGCAATCCCAGTATCGAGCATCTCAAGGCAAACGGGCTCGGCAAGAT TCCCGCTTTTGTGGGCGAGGACGGTTACACTCTGTCCGAGTGCATTGCTGTCGCCATCTACAGTACGTTTTTCCT GAACTTGATCGTCCACTACTTCATCGCGTGATGATATGATCTACTTCAATATACAGTTTATCCCTGTCTGAATCT TTCTGTGTTGCTATAATCACCATCTGACGCTGTCACCTCATCTTTTCTTGGTCCGAGGCTTTGTCTGGCGAACCG TTTCGGGCTGACATACTGCAGTTACCTCTCAGAACGAGAAAACTACGCTGCTGGGGAAGACCAAGCAAGAGTACG CGCAAACGAGATCCCATCTTCCATGTGGCGCATGCTAACCGTCCCAGCTACGCCTCGATTCTGAAATGGATGTCC TTCTTCAACTCTGAAATTGTCCCTCCCCTGGGCAACTGGTTTCAGCCCCTCATTGGCAGGATGCCCTACAACAAG AAGACTGTCGAGGATGGCGCCAAGGCCACCGCCAAGGCCATTGGCGTCGTCGAAAACTACTTGATCCGCCACACT TACCTCGTTGGCGAGCGCATTACTCTCGCCGACTTGTTCTGTGCCGCCCTCCTGAACCGAGGCTTTCAGTACTTC TTCGACAAGCAGTGGCGCCAGCAGAACCCCTGTGTCGCTCGCTGGTACGATACCGTCGTCAGCCAGCCCATCTAC ACGGCCGTCGCCAAGAAGATCGATTACCTCGACAAGCCCGCCCTCACCAACACTGCTCCTAAGAAGCCCGAGCAG CCCAAGGCCGCCGCCAAGGCCGCCCCCGCCGCTGCTGCTGCTGCCGATGACGAGGAGGACGCTCCGGCAGCTCCC AAGGCCAAGCACCCCTGCGAGGCCCTGCCCAAGGCATCGTTCCCTCTGGATGAGTGGAAGCGCCACTTCTCCAAC AACGAGACTCCCGACGCTCTCAAGTGGTTCTGGGAGAATGTTCCCCTGGGGGAGGAATATTCCATCTGGCGCTGT GATTACAAGTACAATGATGAGCTCACCCTGACATTCATGTCCAACAACCTCATCGGCGGCCTCTTTGCTCGTCTG GAGGGCTCTCGCAAGTACATATTCGGCAGCTCCTCCGTTTACGGCGAGAACAACGATTCGGTCATTCAGGGCGCC TTTGTCATCCGAGGTCAGGAATACAAGCCTGTATTCGACGTCGCTCCGGACTACGAGAGCTACGACTTCGCCAAG CTCGATCCCAAGAACGAAAAAGACCGCGAGTTCCTCGAGAATATGTGGTCTTGGGAGAAACCTGTCGTTGTCAAG GGCAAAGAGTACGCTCACGCTTGCGGCAAGGTTTTCAAATAG |