© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5672 |
| Gene name | |
| Location | Contig_576:1383..2553 |
| Strand | - |
| Gene length (bp) | 1170 |
| Transcript length (bp) | 915 |
| Coding sequence length (bp) | 915 |
| Protein length (aa) | 305 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04446 | Thg1 | tRNAHis guanylyltransferase | 8.3E-52 | 6 | 136 |
| PF14413 | Thg1C | Thg1 C terminal domain | 2.2E-48 | 139 | 282 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SDM8|THG1_NEUCR | tRNA(His) guanylyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rgt-1 PE=3 SV=1 | 1 | 304 | 2.0E-139 |
| sp|Q6BKD4|THG1_DEBHA | tRNA(His) guanylyltransferase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=THG1 PE=3 SV=2 | 1 | 293 | 3.0E-97 |
| sp|Q9CY52|THG1_MOUSE | Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1 | 1 | 296 | 3.0E-91 |
| sp|Q5M965|THG1_RAT | Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1 | 1 | 296 | 2.0E-90 |
| sp|Q05B50|THG1_BOVIN | Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1 | 1 | 293 | 3.0E-90 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SDM8|THG1_NEUCR | tRNA(His) guanylyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rgt-1 PE=3 SV=1 | 1 | 304 | 2.0E-139 |
| sp|Q6BKD4|THG1_DEBHA | tRNA(His) guanylyltransferase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=THG1 PE=3 SV=2 | 1 | 293 | 3.0E-97 |
| sp|Q9CY52|THG1_MOUSE | Probable tRNA(His) guanylyltransferase OS=Mus musculus GN=Thg1l PE=1 SV=1 | 1 | 296 | 3.0E-91 |
| sp|Q5M965|THG1_RAT | Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1 | 1 | 296 | 2.0E-90 |
| sp|Q05B50|THG1_BOVIN | Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1 | 1 | 293 | 3.0E-90 |
| sp|Q9Y7T3|THG1_SCHPO | tRNA(His) guanylyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thg1 PE=3 SV=1 | 1 | 292 | 1.0E-87 |
| sp|Q9NWX6|THG1_HUMAN | Probable tRNA(His) guanylyltransferase OS=Homo sapiens GN=THG1L PE=1 SV=2 | 1 | 293 | 4.0E-87 |
| sp|Q54E29|THG1_DICDI | Probable tRNA(His) guanylyltransferase OS=Dictyostelium discoideum GN=thg1 PE=3 SV=1 | 1 | 296 | 3.0E-86 |
| sp|Q9V3N8|THG1_DROME | Probable tRNA(His) guanylyltransferase OS=Drosophila melanogaster GN=l(2)35Bc PE=2 SV=1 | 1 | 242 | 8.0E-77 |
| sp|Q6FPX3|THG1_CANGA | tRNA(His) guanylyltransferase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=THG1 PE=3 SV=1 | 1 | 252 | 4.0E-74 |
| sp|Q6CW75|THG1_KLULA | tRNA(His) guanylyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=THG1 PE=3 SV=1 | 1 | 249 | 3.0E-73 |
| sp|P53215|THG1_YEAST | tRNA(His) guanylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THG1 PE=1 SV=1 | 1 | 252 | 6.0E-73 |
| sp|Q75DJ3|THG1_ASHGO | tRNA(His) guanylyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=THG1 PE=3 SV=1 | 1 | 250 | 1.0E-71 |
| sp|F4IRQ5|THG1_ARATH | tRNA(His) guanylyltransferase 1 OS=Arabidopsis thaliana GN=THG1 PE=1 SV=1 | 7 | 294 | 3.0E-64 |
| sp|F4ISV6|THG2_ARATH | tRNA(His) guanylyltransferase 2 OS=Arabidopsis thaliana GN=THG2 PE=1 SV=1 | 7 | 294 | 1.0E-63 |
| sp|F4IRQ5|THG1_ARATH | tRNA(His) guanylyltransferase 1 OS=Arabidopsis thaliana GN=THG1 PE=1 SV=1 | 1 | 290 | 3.0E-57 |
| sp|F4ISV6|THG2_ARATH | tRNA(His) guanylyltransferase 2 OS=Arabidopsis thaliana GN=THG2 PE=1 SV=1 | 1 | 287 | 8.0E-55 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000287 | magnesium ion binding | Yes |
| GO:0008193 | tRNA guanylyltransferase activity | Yes |
| GO:0006400 | tRNA modification | Yes |
| GO:0008152 | metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0043412 | macromolecule modification | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0046872 | metal ion binding | No |
| GO:0008033 | tRNA processing | No |
| GO:0006396 | RNA processing | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0009987 | cellular process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0034470 | ncRNA processing | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006399 | tRNA metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0009451 | RNA modification | No |
| GO:0016779 | nucleotidyltransferase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008192 | RNA guanylyltransferase activity | No |
| GO:0070568 | guanylyltransferase activity | No |
| GO:0043169 | cation binding | No |
| GO:0005488 | binding | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0034660 | ncRNA metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5672 MANSKFEYVRHFEQADVLLPNTWIVIRLDGRAFTKMCAKYKFTKPNDRRALDLMNTAAKAVVSDLPEITIAYGVS DEYSFVFHKTCNLFDRRASKLVSTVVSTFTANYVYSWCAHFPDTPLSFPLPTFDGRAVCYPSVENLRDYLSWRQV DCRSTPSLARRFTLTQQGHINNLYNTTFWALVQMGGLENKDAEKALAGTVASDKNEILFSRFQINYNNEPEMFRK GSVVFRDYELVDPESHQVAEEMDNLAEPARPSKKQTEKERRRRSRARLVVEHLDIIKDDFWDRRPWILSNKPGLA PKEP* |
| Coding | >Ophun1|5672 ATGGCAAACTCCAAGTTCGAATACGTCCGTCACTTCGAGCAGGCAGATGTCCTGCTACCCAACACGTGGATCGTC ATCCGCCTCGATGGCAGGGCCTTTACAAAAATGTGTGCCAAGTACAAGTTTACAAAGCCCAATGACCGAAGAGCT CTCGACCTCATGAACACCGCCGCCAAGGCCGTCGTCTCCGATCTACCCGAAATCACCATCGCATACGGCGTCAGC GACGAGTACAGCTTCGTCTTCCACAAGACCTGCAACCTCTTCGACCGCAGAGCAAGCAAACTCGTCAGCACCGTC GTCTCTACCTTTACCGCAAACTACGTCTACTCTTGGTGCGCCCACTTCCCCGACACACCCCTCTCCTTTCCCCTC CCGACTTTCGACGGACGGGCGGTTTGCTATCCCAGCGTCGAGAATCTCCGCGACTACTTGAGCTGGCGGCAAGTA GATTGTAGGTCCACTCCAAGTCTCGCGCGTCGATTTACGTTGACGCAGCAAGGTCACATCAACAACCTGTACAAC ACCACCTTCTGGGCACTGGTGCAGATGGGGGGTCTCGAGAACAAAGACGCCGAAAAGGCTCTAGCCGGAACTGTT GCGTCGGATAAGAACGAGATACTCTTCAGCCGCTTCCAGATCAACTACAACAATGAACCAGAGATGTTCAGAAAG GGCAGCGTCGTCTTCCGAGACTATGAGCTCGTCGATCCGGAAAGCCACCAGGTAGCGGAGGAGATGGACAACCTC GCCGAACCCGCGCGACCGTCCAAGAAGCAGACGGAAAAGGAAAGGAGGCGCAGGTCAAGGGCACGGCTGGTGGTC GAGCACCTCGACATCATCAAGGACGATTTCTGGGACAGAAGACCATGGATATTATCCAACAAACCCGGCCTTGCG CCGAAAGAACCGTGA |
| Transcript | >Ophun1|5672 ATGGCAAACTCCAAGTTCGAATACGTCCGTCACTTCGAGCAGGCAGATGTCCTGCTACCCAACACGTGGATCGTC ATCCGCCTCGATGGCAGGGCCTTTACAAAAATGTGTGCCAAGTACAAGTTTACAAAGCCCAATGACCGAAGAGCT CTCGACCTCATGAACACCGCCGCCAAGGCCGTCGTCTCCGATCTACCCGAAATCACCATCGCATACGGCGTCAGC GACGAGTACAGCTTCGTCTTCCACAAGACCTGCAACCTCTTCGACCGCAGAGCAAGCAAACTCGTCAGCACCGTC GTCTCTACCTTTACCGCAAACTACGTCTACTCTTGGTGCGCCCACTTCCCCGACACACCCCTCTCCTTTCCCCTC CCGACTTTCGACGGACGGGCGGTTTGCTATCCCAGCGTCGAGAATCTCCGCGACTACTTGAGCTGGCGGCAAGTA GATTGTAGGTCCACTCCAAGTCTCGCGCGTCGATTTACGTTGACGCAGCAAGGTCACATCAACAACCTGTACAAC ACCACCTTCTGGGCACTGGTGCAGATGGGGGGTCTCGAGAACAAAGACGCCGAAAAGGCTCTAGCCGGAACTGTT GCGTCGGATAAGAACGAGATACTCTTCAGCCGCTTCCAGATCAACTACAACAATGAACCAGAGATGTTCAGAAAG GGCAGCGTCGTCTTCCGAGACTATGAGCTCGTCGATCCGGAAAGCCACCAGGTAGCGGAGGAGATGGACAACCTC GCCGAACCCGCGCGACCGTCCAAGAAGCAGACGGAAAAGGAAAGGAGGCGCAGGTCAAGGGCACGGCTGGTGGTC GAGCACCTCGACATCATCAAGGACGATTTCTGGGACAGAAGACCATGGATATTATCCAACAAACCCGGCCTTGCG CCGAAAGAACCGTGA |
| Gene | >Ophun1|5672 ATGGCAAACTCCAAGTGTGTCCCGTCAGAAGGAACCATGGCCAGCTCTACTGACGCCTCTTCAGGTTCGAATACG TCCGTCACTTCGAGCAGGCAGATGTCCTGCTACCCAACACGTGGATCGTCATCCGCCTCGATGGCAGGGCCTTTA CAAAGTAATAGCCTCCCTCCCGATTCCACGAATCGCCTGACCCGAGCCCGTCTCCAGAATGTGTGCCAAGTACAA GTTTACAAAGCCCAATGACCGAAGAGCTCTCGACCTCATGAACACCGCCGCCAAGGCCGTCGTCTCCGATCTACC CGAAATCACCATCGCATACGGCGTCAGCGACGAGTACAGCTTCGTCTTCCACAAGACCTGCAACCTCTTCGACCG CAGAGCAAGGTCAGCACTGCCCTCACACCTCCAGCCCCTAGCCAACTCACAGCCCCCAGCAAACTCGTCAGCACC GTCGTCTCTACCTTTACCGCAAACTACGTCTACTCTTGGTGCGCCCACTTCCCCGACACACCCCTCTCCTTTCCC CTCCCGACTTTCGACGGACGGGCGGTTTGCTATCCCAGCGTCGAGAATCTCCGCGACTACTTGAGCTGGCGGCAA GTAGATTGTAGGTCCACTCCAAGTCTCGCGCGTCGATTTACGTTGACGCAGCAAGGTCACATCAACAACCTGTAC AACACCACCTTCTGGGCACTGGTGCAGATGGGGGGTCTCGAGAACAAAGACGCCGAAAAGGCTCTAGCCGTACGA AACACGCCCTCCGTCAAGCCAGTCTAGCTAAGCCGAGCAGGGAACTGTTGCGTCGGATAAGAACGAGATACTCTT CAGCCGCTTCCAGATCAACTACAACAATGAACCAGAGATGTTCAGAAAGGGCAGCGTCGTCTTCCGAGACGTGAG TCTTGTCCTGGTCCTTTCACTGTATCTCAAGACGAGTGCTGACCAAAGCAGTATGAGCTCGTCGATCCGGAAAGC CACCAGGTAGCGGAGGAGATGGACAACCTCGCCGAACCCGCGCGACCGTCCAAGAAGCAGACGGAAAAGGAAAGG AGGCGCAGGTCAAGGGCACGGCTGGTGGTCGAGCACCTCGACATCATCAAGGACGATTTCTGGGACAGAAGACCA TGGATATTATCCAACAAACCCGGCCTTGCGCCGAAAGAACCGTGA |