Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5662
Gene name
LocationContig_573:8568..9738
Strand+
Gene length (bp)1170
Transcript length (bp)1170
Coding sequence length (bp)1170
Protein length (aa) 390

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04757 Pex2_Pex12 Pex2 / Pex12 amino terminal region 3.8E-36 34 234
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2.8E-11 329 367
PF13639 zf-RING_2 Ring finger domain 8.1E-11 329 368
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.3E-09 327 370
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.5E-09 330 367
PF15227 zf-C3HC4_4 zinc finger of C3HC4-type, RING 3.3E-07 330 367
PF14634 zf-RING_5 zinc-RING finger domain 6.2E-07 329 369
PF13445 zf-RING_UBOX RING-type zinc-finger 1.2E-06 330 365

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia angusta GN=PEX10 PE=3 SV=1 19 380 1.0E-59
sp|Q05568|PEX10_YEAST Peroxisome biogenesis factor 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX10 PE=1 SV=1 13 380 5.0E-43
sp|Q9SYU4|PEX10_ARATH Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1 17 368 4.0E-41
sp|Q92265|PEX10_PICPA Peroxisome biogenesis factor 10 OS=Komagataella pastoris GN=PEX10 PE=1 SV=1 19 361 9.0E-34
sp|Q8HXW8|PEX10_MACFA Peroxisome biogenesis factor 10 OS=Macaca fascicularis GN=PEX10 PE=2 SV=1 20 380 1.0E-33
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Swissprot ID Swissprot Description Start End E-value
sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia angusta GN=PEX10 PE=3 SV=1 19 380 1.0E-59
sp|Q05568|PEX10_YEAST Peroxisome biogenesis factor 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX10 PE=1 SV=1 13 380 5.0E-43
sp|Q9SYU4|PEX10_ARATH Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1 17 368 4.0E-41
sp|Q92265|PEX10_PICPA Peroxisome biogenesis factor 10 OS=Komagataella pastoris GN=PEX10 PE=1 SV=1 19 361 9.0E-34
sp|Q8HXW8|PEX10_MACFA Peroxisome biogenesis factor 10 OS=Macaca fascicularis GN=PEX10 PE=2 SV=1 20 380 1.0E-33
sp|O60683|PEX10_HUMAN Peroxisome biogenesis factor 10 OS=Homo sapiens GN=PEX10 PE=1 SV=1 20 380 2.0E-32
sp|Q54S31|PEX10_DICDI Peroxisome biogenesis factor 10 OS=Dictyostelium discoideum GN=pex10 PE=3 SV=2 19 235 8.0E-25
sp|B1AUE5|PEX10_MOUSE Peroxisome biogenesis factor 10 OS=Mus musculus GN=Pex10 PE=2 SV=1 20 211 8.0E-21
sp|Q9UUF0|PEX10_SCHPO Peroxisome biogenesis factor 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pas4 PE=3 SV=1 312 380 3.0E-13
sp|B1AUE5|PEX10_MOUSE Peroxisome biogenesis factor 10 OS=Mus musculus GN=Pex10 PE=2 SV=1 330 380 4.0E-11
sp|Q54S31|PEX10_DICDI Peroxisome biogenesis factor 10 OS=Dictyostelium discoideum GN=pex10 PE=3 SV=2 329 379 2.0E-09
sp|Q6R567|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum GN=RMA1H1 PE=1 SV=1 330 389 3.0E-09
sp|P93030|RMA2_ARATH E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana GN=RMA2 PE=1 SV=1 330 379 8.0E-09
sp|Q8GUK7|RMA3_ARATH E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana GN=RMA3 PE=1 SV=1 330 379 2.0E-08
sp|Q7YRV4|RO52_BOVIN E3 ubiquitin-protein ligase TRIM21 OS=Bos taurus GN=TRIM21 PE=2 SV=1 330 382 1.0E-07
sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1 329 389 1.0E-07
sp|Q91YT2|RN185_MOUSE E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2 SV=1 329 379 3.0E-07
sp|Q75EN0|RAD18_ASHGO Postreplication repair E3 ubiquitin-protein ligase RAD18 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RAD18 PE=3 SV=1 329 384 3.0E-07
sp|Q9P3U8|YJ95_SCHPO Uncharacterized RING finger protein C548.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC548.05c PE=3 SV=1 329 374 3.0E-07
sp|Q568Y3|RN185_RAT E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1 329 379 7.0E-07
sp|Q12899|TRI26_HUMAN Tripartite motif-containing protein 26 OS=Homo sapiens GN=TRIM26 PE=1 SV=1 330 382 8.0E-07
sp|Q96GF1|RN185_HUMAN E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens GN=RNF185 PE=1 SV=1 329 379 8.0E-07
sp|Q7YR34|TRI26_PANTR Tripartite motif-containing protein 26 OS=Pan troglodytes GN=TRIM26 PE=3 SV=1 330 382 8.0E-07
sp|Q99PN3|TRI26_MOUSE Tripartite motif-containing protein 26 OS=Mus musculus GN=Trim26 PE=2 SV=3 330 382 9.0E-07
sp|Q5ZIR9|RN185_CHICK E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus GN=RNF185 PE=2 SV=1 329 379 9.0E-07
sp|O35445|RNF5_MOUSE E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1 329 379 1.0E-06
sp|Q99942|RNF5_HUMAN E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1 329 379 1.0E-06
sp|Q5M807|RNF5_RAT E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1 329 379 1.0E-06
sp|Q5RFK9|RN185_PONAB E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii GN=RNF185 PE=2 SV=1 329 379 1.0E-06
sp|P62603|TRI26_RAT Tripartite motif-containing protein 26 OS=Rattus norvegicus GN=Trim26 PE=3 SV=1 330 382 1.0E-06
sp|Q6FPI4|RAD18_CANGA Postreplication repair E3 ubiquitin-protein ligase RAD18 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RAD18 PE=3 SV=1 329 376 1.0E-06
sp|Q6PC78|RN185_DANRE E3 ubiquitin-protein ligase RNF185 OS=Danio rerio GN=rnf185 PE=2 SV=1 329 379 2.0E-06
sp|O64425|RMA1_ARATH E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1 PE=1 SV=1 330 379 2.0E-06
sp|Q8N448|LNX2_HUMAN Ligand of Numb protein X 2 OS=Homo sapiens GN=LNX2 PE=1 SV=1 330 377 3.0E-06
sp|Q9UPQ7|PZRN3_HUMAN E3 ubiquitin-protein ligase PDZRN3 OS=Homo sapiens GN=PDZRN3 PE=1 SV=2 329 382 4.0E-06
sp|Q69ZS0|PZRN3_MOUSE E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus GN=Pdzrn3 PE=1 SV=3 329 382 4.0E-06
sp|P68907|PZRN3_RAT E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus GN=Pdzrn3 PE=1 SV=1 329 382 5.0E-06
sp|O77666|TRI26_PIG Tripartite motif-containing protein 26 OS=Sus scrofa GN=TRIM26 PE=3 SV=2 330 382 6.0E-06
sp|O74747|RAD18_SCHPO Postreplication repair E3 ubiquitin-protein ligase rad18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rhp18 PE=3 SV=1 329 368 7.0E-06
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GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5662
MTPPTPSSSSSSSSTPFPFASAPDIVRAHQKDGYFTGQVANQLTDLWRRIAGARAAHARAPELHCLGALLYLGLT
TVPGNRTLGEEYCHVVQVEARAGRLPALGARAAYVVGAVVVPYLVARLMPRVRAGIRAALHRRRASLAESGDGKA
FQARLVDYLSRHVSGFTSTAPLQALTLALFYFQGSYYELSKRLLNLRYVFTRSMPDTPDRAGYEVLGLLLAIQLA
VQSYLHVRANLVSSPDSSPDSLSSPPRDRAAFRAATIDVSLDHTNAYAAANSDLLLSDLGGPRAPSASRVDLQAA
TKTPVAPNPRFDLADASVMAYIRGAQQRRCTLCLDPLRDPAATQCGHVFCWRCIADWVREKPECPLCRREALVQH
ILPLRALHGVKATP*
Coding >Ophun1|5662
ATGACGCCCCCGACCCCATCATCCTCATCCTCCTCCTCATCCACGCCCTTCCCCTTCGCCTCAGCCCCGGACATC
GTCCGCGCCCACCAAAAAGACGGCTACTTCACCGGCCAGGTAGCCAACCAGCTAACCGACCTATGGCGAAGGATA
GCCGGAGCGCGCGCCGCCCACGCCCGAGCCCCCGAGCTGCACTGCCTCGGCGCCCTGCTCTACCTCGGCCTGACG
ACGGTTCCGGGCAACCGGACGCTAGGCGAGGAGTACTGCCACGTCGTCCAAGTCGAGGCCCGCGCCGGACGCTTA
CCGGCGCTCGGGGCTCGGGCCGCGTACGTTGTTGGCGCCGTCGTGGTGCCGTATCTGGTTGCGAGGCTGATGCCG
AGGGTGAGGGCCGGGATACGGGCCGCGCTGCATCGTCGACGGGCTTCGTTGGCGGAATCCGGTGATGGGAAGGCT
TTTCAGGCCCGGCTCGTCGATTATCTCTCTCGTCACGTCTCGGGCTTCACGTCGACGGCGCCGCTGCAGGCCCTC
ACGCTGGCCCTCTTCTACTTTCAGGGCTCCTACTACGAACTCAGCAAGCGGCTCCTCAACCTCCGCTACGTCTTC
ACCCGCTCCATGCCCGATACTCCCGACCGCGCCGGCTACGAAGTCCTCGGCCTCCTGCTCGCCATCCAGCTCGCC
GTCCAGTCATACCTCCACGTCCGCGCCAACCTCGTCTCCTCCCCCGACTCCTCCCCCGACTCCCTCTCCTCTCCT
CCCCGAGACCGCGCCGCCTTCCGAGCCGCCACCATCGACGTCTCCCTCGACCACACAAACGCCTACGCTGCCGCC
AACAGCGACCTCCTCCTCTCCGACCTCGGCGGCCCCCGCGCTCCCTCAGCCAGCCGCGTCGACCTCCAGGCCGCC
ACCAAGACGCCCGTCGCCCCCAACCCCCGCTTCGACCTCGCCGACGCCTCCGTCATGGCCTACATCCGAGGCGCC
CAGCAGCGGAGGTGCACCCTCTGCCTTGACCCCCTCCGCGACCCGGCTGCCACCCAGTGCGGCCACGTCTTTTGC
TGGCGCTGCATCGCCGACTGGGTCAGGGAGAAGCCTGAGTGTCCGCTGTGTCGGAGGGAGGCCCTGGTGCAGCAC
ATACTCCCTCTGCGCGCCTTGCATGGCGTAAAAGCAACCCCGTGA
Transcript >Ophun1|5662
ATGACGCCCCCGACCCCATCATCCTCATCCTCCTCCTCATCCACGCCCTTCCCCTTCGCCTCAGCCCCGGACATC
GTCCGCGCCCACCAAAAAGACGGCTACTTCACCGGCCAGGTAGCCAACCAGCTAACCGACCTATGGCGAAGGATA
GCCGGAGCGCGCGCCGCCCACGCCCGAGCCCCCGAGCTGCACTGCCTCGGCGCCCTGCTCTACCTCGGCCTGACG
ACGGTTCCGGGCAACCGGACGCTAGGCGAGGAGTACTGCCACGTCGTCCAAGTCGAGGCCCGCGCCGGACGCTTA
CCGGCGCTCGGGGCTCGGGCCGCGTACGTTGTTGGCGCCGTCGTGGTGCCGTATCTGGTTGCGAGGCTGATGCCG
AGGGTGAGGGCCGGGATACGGGCCGCGCTGCATCGTCGACGGGCTTCGTTGGCGGAATCCGGTGATGGGAAGGCT
TTTCAGGCCCGGCTCGTCGATTATCTCTCTCGTCACGTCTCGGGCTTCACGTCGACGGCGCCGCTGCAGGCCCTC
ACGCTGGCCCTCTTCTACTTTCAGGGCTCCTACTACGAACTCAGCAAGCGGCTCCTCAACCTCCGCTACGTCTTC
ACCCGCTCCATGCCCGATACTCCCGACCGCGCCGGCTACGAAGTCCTCGGCCTCCTGCTCGCCATCCAGCTCGCC
GTCCAGTCATACCTCCACGTCCGCGCCAACCTCGTCTCCTCCCCCGACTCCTCCCCCGACTCCCTCTCCTCTCCT
CCCCGAGACCGCGCCGCCTTCCGAGCCGCCACCATCGACGTCTCCCTCGACCACACAAACGCCTACGCTGCCGCC
AACAGCGACCTCCTCCTCTCCGACCTCGGCGGCCCCCGCGCTCCCTCAGCCAGCCGCGTCGACCTCCAGGCCGCC
ACCAAGACGCCCGTCGCCCCCAACCCCCGCTTCGACCTCGCCGACGCCTCCGTCATGGCCTACATCCGAGGCGCC
CAGCAGCGGAGGTGCACCCTCTGCCTTGACCCCCTCCGCGACCCGGCTGCCACCCAGTGCGGCCACGTCTTTTGC
TGGCGCTGCATCGCCGACTGGGTCAGGGAGAAGCCTGAGTGTCCGCTGTGTCGGAGGGAGGCCCTGGTGCAGCAC
ATACTCCCTCTGCGCGCCTTGCATGGCGTAAAAGCAACCCCGTGA
Gene >Ophun1|5662
ATGACGCCCCCGACCCCATCATCCTCATCCTCCTCCTCATCCACGCCCTTCCCCTTCGCCTCAGCCCCGGACATC
GTCCGCGCCCACCAAAAAGACGGCTACTTCACCGGCCAGGTAGCCAACCAGCTAACCGACCTATGGCGAAGGATA
GCCGGAGCGCGCGCCGCCCACGCCCGAGCCCCCGAGCTGCACTGCCTCGGCGCCCTGCTCTACCTCGGCCTGACG
ACGGTTCCGGGCAACCGGACGCTAGGCGAGGAGTACTGCCACGTCGTCCAAGTCGAGGCCCGCGCCGGACGCTTA
CCGGCGCTCGGGGCTCGGGCCGCGTACGTTGTTGGCGCCGTCGTGGTGCCGTATCTGGTTGCGAGGCTGATGCCG
AGGGTGAGGGCCGGGATACGGGCCGCGCTGCATCGTCGACGGGCTTCGTTGGCGGAATCCGGTGATGGGAAGGCT
TTTCAGGCCCGGCTCGTCGATTATCTCTCTCGTCACGTCTCGGGCTTCACGTCGACGGCGCCGCTGCAGGCCCTC
ACGCTGGCCCTCTTCTACTTTCAGGGCTCCTACTACGAACTCAGCAAGCGGCTCCTCAACCTCCGCTACGTCTTC
ACCCGCTCCATGCCCGATACTCCCGACCGCGCCGGCTACGAAGTCCTCGGCCTCCTGCTCGCCATCCAGCTCGCC
GTCCAGTCATACCTCCACGTCCGCGCCAACCTCGTCTCCTCCCCCGACTCCTCCCCCGACTCCCTCTCCTCTCCT
CCCCGAGACCGCGCCGCCTTCCGAGCCGCCACCATCGACGTCTCCCTCGACCACACAAACGCCTACGCTGCCGCC
AACAGCGACCTCCTCCTCTCCGACCTCGGCGGCCCCCGCGCTCCCTCAGCCAGCCGCGTCGACCTCCAGGCCGCC
ACCAAGACGCCCGTCGCCCCCAACCCCCGCTTCGACCTCGCCGACGCCTCCGTCATGGCCTACATCCGAGGCGCC
CAGCAGCGGAGGTGCACCCTCTGCCTTGACCCCCTCCGCGACCCGGCTGCCACCCAGTGCGGCCACGTCTTTTGC
TGGCGCTGCATCGCCGACTGGGTCAGGGAGAAGCCTGAGTGTCCGCTGTGTCGGAGGGAGGCCCTGGTGCAGCAC
ATACTCCCTCTGCGCGCCTTGCATGGCGTAAAAGCAACCCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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