Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|566
Gene name
LocationContig_1177:1753..2464
Strand+
Gene length (bp)711
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 5.6E-14 12 190

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0110165 cellular anatomical entity No
GO:0016020 membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 107 129 22
3 136 158 22
4 173 195 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|566
MGFGTVVHHVGTLLLLIATILLIVVDVTAPVYPHLAILRVDLGRNVRGSEVTYGSWGWCHRGLGEWDECSRRHIG
YNPAQVIHDIDGTSFSRAAENTSKALTRVMVLHGVGTVLCFVAFCLCLSAGVVGSVTGAAVAMLAFIINIVAMAC
DFITFGIIKRHVNTQDRSIAHWASGIWCVLVAALFSLLAALIVLTTCFAGRSKRRRERTTPTPTTTTTTTGKVPF
WQRLPLMKRKA*
Coding >Ophun1|566
ATGGGCTTCGGCACCGTCGTCCATCACGTCGGCACCCTGCTGCTGCTCATCGCCACCATCCTCCTCATCGTCGTC
GACGTCACCGCCCCCGTCTACCCTCACCTCGCCATCCTACGCGTCGATCTCGGCCGCAACGTCCGCGGCTCTGAA
GTCACCTACGGCAGCTGGGGATGGTGTCACCGCGGTCTGGGCGAGTGGGACGAGTGCTCGCGTCGACACATTGGC
TATAACCCTGCCCAGGTGATTCATGATATCGACGGAACTAGCTTCAGCCGCGCGGCCGAGAACACGTCCAAGGCC
CTGACGCGCGTCATGGTCTTGCACGGCGTGGGAACGGTCCTGTGCTTCGTCGCCTTTTGTCTCTGCCTCAGCGCC
GGTGTCGTCGGTTCCGTCACGGGAGCGGCCGTGGCCATGCTGGCTTTCATCATCAACATCGTCGCCATGGCCTGC
GACTTCATCACTTTTGGCATCATCAAGAGGCATGTCAACACCCAAGATCGCAGCATCGCTCATTGGGCTTCGGGA
ATCTGGTGCGTCTTGGTGGCGGCTCTCTTCAGCTTGCTGGCCGCCCTCATCGTTCTCACCACCTGCTTCGCTGGT
CGATCCAAGAGACGTCGTGAGAGGACGACGCCGACGCCGACGACTACGACTACGACGACGGGCAAGGTTCCGTTT
TGGCAACGTCTGCCGCTGATGAAGCGCAAGGCTTAG
Transcript >Ophun1|566
ATGGGCTTCGGCACCGTCGTCCATCACGTCGGCACCCTGCTGCTGCTCATCGCCACCATCCTCCTCATCGTCGTC
GACGTCACCGCCCCCGTCTACCCTCACCTCGCCATCCTACGCGTCGATCTCGGCCGCAACGTCCGCGGCTCTGAA
GTCACCTACGGCAGCTGGGGATGGTGTCACCGCGGTCTGGGCGAGTGGGACGAGTGCTCGCGTCGACACATTGGC
TATAACCCTGCCCAGGTGATTCATGATATCGACGGAACTAGCTTCAGCCGCGCGGCCGAGAACACGTCCAAGGCC
CTGACGCGCGTCATGGTCTTGCACGGCGTGGGAACGGTCCTGTGCTTCGTCGCCTTTTGTCTCTGCCTCAGCGCC
GGTGTCGTCGGTTCCGTCACGGGAGCGGCCGTGGCCATGCTGGCTTTCATCATCAACATCGTCGCCATGGCCTGC
GACTTCATCACTTTTGGCATCATCAAGAGGCATGTCAACACCCAAGATCGCAGCATCGCTCATTGGGCTTCGGGA
ATCTGGTGCGTCTTGGTGGCGGCTCTCTTCAGCTTGCTGGCCGCCCTCATCGTTCTCACCACCTGCTTCGCTGGT
CGATCCAAGAGACGTCGTGAGAGGACGACGCCGACGCCGACGACTACGACTACGACGACGGGCAAGGTTCCGTTT
TGGCAACGTCTGCCGCTGATGAAGCGCAAGGCTTAG
Gene >Ophun1|566
ATGGGCTTCGGCACCGTCGTCCATCACGTCGGCACCCTGCTGCTGCTCATCGCCACCATCCTCCTCATCGTCGTC
GACGTCACCGCCCCCGTCTACCCTCACCTCGCCATCCTACGCGTCGATCTCGGCCGCAACGTCCGCGGCTCTGAA
GTCACCTACGGCAGCTGGGGATGGTGTCACCGCGGTCTGGGCGAGTGGGACGAGTGCTCGCGTCGACACATTGGC
TATAACCCTGCCCAGGTGATTCATGATATCGACGGAACTAGCTTCAGCCGCGCGGCCGAGAACACGTCCAAGGCC
CTGACGCGCGTCATGGTCTTGCACGGCGTGGGAACGGTCCTGTGCTTCGTCGCCTTTTGTCTCTGCCTCAGCGCC
GGTGTCGTCGGTTCCGTCACGGGAGCGGCCGTGGCCATGCTGGCTTTCATCATCAACATCGTCGCCATGGCCTGC
GACTTCATCACTTTTGGCATCATCAAGAGGCATGTCAACACCCAAGATCGCAGCATCGCTCATTGGGCTTCGGGA
ATCTGGTGCGTCTTGGTGGCGGCTCTCTTCAGCTTGCTGGCCGCCCTCATCGTTCTCACCACCTGCTTCGCTGGT
CGATCCAAGAGACGTCGTGAGAGGACGACGCCGACGCCGACGACTACGACTACGACGACGGGCAAGGTTCCGTTT
TGGCAACGTCTGCCGCTGATGAAGCGCAAGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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