Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5653
Gene name
LocationContig_572:136..717
Strand+
Gene length (bp)581
Transcript length (bp)438
Coding sequence length (bp)438
Protein length (aa) 146

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02656 DUF202 Domain of unknown function (DUF202) 2.7E-16 33 104

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 43 65 22
2 80 100 20
3 121 140 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5653
MNLADGNRAEASSFTAWPLLGPLLFENESSDARDHCANERTFLSYLRLATYMAVVSVAMTLSFQLNQQPSKLERH
MARPLGIAFWLLSVVTLFMGLGNYITTVNKYGKKAAIVQTGWKTQLVLVVLALCIIGTCAILLIIERTNP*
Coding >Ophun1|5653
ATGAATCTCGCTGACGGAAACAGGGCCGAGGCATCGTCCTTCACCGCGTGGCCTCTTCTCGGACCGCTCCTCTTC
GAGAATGAGAGTAGTGATGCGCGGGATCACTGCGCCAATGAACGAACCTTCTTATCATACCTTCGTCTCGCCACG
TACATGGCCGTCGTCTCCGTCGCAATGACCCTCTCCTTTCAACTCAACCAGCAACCAAGCAAGCTAGAACGACAC
ATGGCAAGACCCCTCGGCATCGCCTTTTGGCTCCTTTCCGTCGTGACTCTCTTCATGGGACTGGGAAACTACATC
ACAACCGTCAACAAGTACGGCAAAAAAGCCGCCATCGTCCAGACCGGCTGGAAGACGCAACTCGTCCTGGTTGTA
TTGGCCCTGTGCATCATCGGAACCTGTGCCATCCTCCTCATCATCGAAAGGACCAACCCTTGA
Transcript >Ophun1|5653
ATGAATCTCGCTGACGGAAACAGGGCCGAGGCATCGTCCTTCACCGCGTGGCCTCTTCTCGGACCGCTCCTCTTC
GAGAATGAGAGTAGTGATGCGCGGGATCACTGCGCCAATGAACGAACCTTCTTATCATACCTTCGTCTCGCCACG
TACATGGCCGTCGTCTCCGTCGCAATGACCCTCTCCTTTCAACTCAACCAGCAACCAAGCAAGCTAGAACGACAC
ATGGCAAGACCCCTCGGCATCGCCTTTTGGCTCCTTTCCGTCGTGACTCTCTTCATGGGACTGGGAAACTACATC
ACAACCGTCAACAAGTACGGCAAAAAAGCCGCCATCGTCCAGACCGGCTGGAAGACGCAACTCGTCCTGGTTGTA
TTGGCCCTGTGCATCATCGGAACCTGTGCCATCCTCCTCATCATCGAAAGGACCAACCCTTGA
Gene >Ophun1|5653
ATGAATCTCGCTGACGGAAACAGGGCCGAGGCATCGTCCTTCACCGCGTGGCCTCTTCTCGGACCGCTCCTCTTC
GAGAATGAGAGTAGTGATGCGCGGGATCACTGCGCCAATGAACGAAGTACATCTCCCGCGCGAACATCGCCGCTG
ATTTACTGATGATGATCCGCTAGCCTTCTTATCATACCTTCGTCTCGCCACGTACATGGCCGTCGTCTCCGTCGC
AATGACCCTCTCCTTTCAACTCAACCAGCAACCAAGCAAGCTAGAACGACACATGGCAAGACCCCTCGGCATCGC
CTTTTGGCTCCTTTCCGTCGTGACTCTCTTCATGGGACTGGGAAACTACATCAGTCAGTCATCTTACCTACCTCG
TGAACCGTACTGACCCGCATCGAAGCAACCGTCAACAAGTACGGCAAAAAAGCCGCCATCGTCCAGACCGGCTGG
AAGACGCAACTCGTCAGTGCTTGTCTCTCACCCTTGTTCGTATCTGACCTCCGCAGGTCCTGGTTGTATTGGCCC
TGTGCATCATCGGAACCTGTGCCATCCTCCTCATCATCGAAAGGACCAACCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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