Protein ID | Ophun1|5611 |
Gene name | |
Location | Contig_563:7975..9223 |
Strand | - |
Gene length (bp) | 1248 |
Transcript length (bp) | 1248 |
Coding sequence length (bp) | 1248 |
Protein length (aa) | 416 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11754 | Velvet | Velvet factor | 6.9E-18 | 200 | 269 |
PF11754 | Velvet | Velvet factor | 1.8E-30 | 274 | 379 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 52 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophun1|5611 MFEAVCAQDSGLRGQQDFRLKAQEEQQQQQQQQQQHQHQQHHHHQQHQQQQHQQQQQQQQQQQPYHHHHHHHHHH HPRNSSILPLPDSSFGGPSDPGRFKAIPPLPSPQQQHRGPDAWNLAAGPDASLFGRTTTPSVHPQPPQHSFQPPP QGPPYGADFPARHQPIHEDQDDVVERTTAPPKMPSLVSPGRSHALGDMRFSLRMRQQPRAARACGFGDRDRRVID PPPIVQLVIESGSMTDEEVQSYLRYESYVMNCAICDETGTRDASFMPDEYQHQRRLMGSLVGTPFVGRDDRGVEG CFFCFGDLSCRTPGAFRLKFTLIMIDPMRAGLIRHFPILTETLSDVFHVYSAKEFPGMLPSSNLAKRLKEQGCII SIKKGNDRSRGGRHRREDTSDEREDGDVDPGPRRRREGRD* |
Coding | >Ophun1|5611 ATGTTTGAAGCTGTTTGCGCCCAGGACTCGGGCCTGCGCGGTCAACAAGATTTCCGGCTCAAGGCCCAGGAGGAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCAGCATCATCATCATCAACAGCATCAACAGCAG CAGCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTTACCACCATCACCACCACCACCACCACCATCAT CACCCGCGAAACTCGTCCATCCTGCCCCTGCCCGACTCCAGCTTCGGCGGACCTTCAGACCCGGGGCGGTTCAAG GCAATCCCTCCATTGCCCTCGCCGCAGCAGCAACACCGCGGCCCGGACGCCTGGAATCTCGCTGCCGGGCCCGAC GCCTCGCTCTTTGGTCGGACAACGACGCCCTCGGTCCATCCCCAGCCGCCGCAACACTCTTTCCAGCCGCCGCCG CAGGGCCCCCCGTACGGAGCCGACTTCCCGGCCCGTCATCAGCCCATCCACGAGGACCAGGACGACGTGGTCGAG CGGACGACTGCGCCCCCCAAGATGCCCAGCCTCGTGTCTCCCGGCCGATCGCACGCCCTGGGCGACATGCGCTTC AGCCTCAGGATGCGGCAGCAGCCCCGAGCGGCACGGGCCTGCGGCTTCGGCGACCGGGACCGGCGCGTCATCGAC CCGCCGCCTATTGTCCAGCTCGTCATCGAGAGCGGGAGCATGACGGATGAAGAGGTGCAGTCGTACCTCCGCTAC GAGAGCTACGTCATGAACTGCGCCATCTGCGACGAGACGGGCACGCGTGACGCCTCGTTCATGCCCGACGAGTAT CAGCACCAGCGCCGCCTGATGGGCTCCCTAGTGGGAACCCCCTTTGTCGGCCGGGACGACAGAGGGGTCGAGGGC TGCTTCTTCTGCTTCGGAGACCTCTCGTGCCGGACGCCGGGCGCGTTCCGGCTCAAGTTTACGCTCATCATGATC GACCCGATGCGGGCGGGTCTGATCCGACACTTTCCCATCCTGACGGAGACGCTGAGCGACGTGTTTCACGTCTAC AGCGCCAAGGAGTTCCCCGGCATGCTTCCCAGCAGCAACCTGGCCAAGCGGCTCAAGGAGCAGGGCTGCATCATC TCCATCAAGAAGGGAAACGACCGGTCGAGGGGAGGTCGACACCGTCGGGAGGACACGTCGGACGAGAGGGAAGAT GGCGACGTTGACCCGGGGCCGCGGAGACGGCGTGAGGGTCGGGATTAG |
Transcript | >Ophun1|5611 ATGTTTGAAGCTGTTTGCGCCCAGGACTCGGGCCTGCGCGGTCAACAAGATTTCCGGCTCAAGGCCCAGGAGGAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCAGCATCATCATCATCAACAGCATCAACAGCAG CAGCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTTACCACCATCACCACCACCACCACCACCATCAT CACCCGCGAAACTCGTCCATCCTGCCCCTGCCCGACTCCAGCTTCGGCGGACCTTCAGACCCGGGGCGGTTCAAG GCAATCCCTCCATTGCCCTCGCCGCAGCAGCAACACCGCGGCCCGGACGCCTGGAATCTCGCTGCCGGGCCCGAC GCCTCGCTCTTTGGTCGGACAACGACGCCCTCGGTCCATCCCCAGCCGCCGCAACACTCTTTCCAGCCGCCGCCG CAGGGCCCCCCGTACGGAGCCGACTTCCCGGCCCGTCATCAGCCCATCCACGAGGACCAGGACGACGTGGTCGAG CGGACGACTGCGCCCCCCAAGATGCCCAGCCTCGTGTCTCCCGGCCGATCGCACGCCCTGGGCGACATGCGCTTC AGCCTCAGGATGCGGCAGCAGCCCCGAGCGGCACGGGCCTGCGGCTTCGGCGACCGGGACCGGCGCGTCATCGAC CCGCCGCCTATTGTCCAGCTCGTCATCGAGAGCGGGAGCATGACGGATGAAGAGGTGCAGTCGTACCTCCGCTAC GAGAGCTACGTCATGAACTGCGCCATCTGCGACGAGACGGGCACGCGTGACGCCTCGTTCATGCCCGACGAGTAT CAGCACCAGCGCCGCCTGATGGGCTCCCTAGTGGGAACCCCCTTTGTCGGCCGGGACGACAGAGGGGTCGAGGGC TGCTTCTTCTGCTTCGGAGACCTCTCGTGCCGGACGCCGGGCGCGTTCCGGCTCAAGTTTACGCTCATCATGATC GACCCGATGCGGGCGGGTCTGATCCGACACTTTCCCATCCTGACGGAGACGCTGAGCGACGTGTTTCACGTCTAC AGCGCCAAGGAGTTCCCCGGCATGCTTCCCAGCAGCAACCTGGCCAAGCGGCTCAAGGAGCAGGGCTGCATCATC TCCATCAAGAAGGGAAACGACCGGTCGAGGGGAGGTCGACACCGTCGGGAGGACACGTCGGACGAGAGGGAAGAT GGCGACGTTGACCCGGGGCCGCGGAGACGGCGTGAGGGTCGGGATTAG |
Gene | >Ophun1|5611 ATGTTTGAAGCTGTTTGCGCCCAGGACTCGGGCCTGCGCGGTCAACAAGATTTCCGGCTCAAGGCCCAGGAGGAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAGCATCAGCAGCATCATCATCATCAACAGCATCAACAGCAG CAGCATCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTTACCACCATCACCACCACCACCACCACCATCAT CACCCGCGAAACTCGTCCATCCTGCCCCTGCCCGACTCCAGCTTCGGCGGACCTTCAGACCCGGGGCGGTTCAAG GCAATCCCTCCATTGCCCTCGCCGCAGCAGCAACACCGCGGCCCGGACGCCTGGAATCTCGCTGCCGGGCCCGAC GCCTCGCTCTTTGGTCGGACAACGACGCCCTCGGTCCATCCCCAGCCGCCGCAACACTCTTTCCAGCCGCCGCCG CAGGGCCCCCCGTACGGAGCCGACTTCCCGGCCCGTCATCAGCCCATCCACGAGGACCAGGACGACGTGGTCGAG CGGACGACTGCGCCCCCCAAGATGCCCAGCCTCGTGTCTCCCGGCCGATCGCACGCCCTGGGCGACATGCGCTTC AGCCTCAGGATGCGGCAGCAGCCCCGAGCGGCACGGGCCTGCGGCTTCGGCGACCGGGACCGGCGCGTCATCGAC CCGCCGCCTATTGTCCAGCTCGTCATCGAGAGCGGGAGCATGACGGATGAAGAGGTGCAGTCGTACCTCCGCTAC GAGAGCTACGTCATGAACTGCGCCATCTGCGACGAGACGGGCACGCGTGACGCCTCGTTCATGCCCGACGAGTAT CAGCACCAGCGCCGCCTGATGGGCTCCCTAGTGGGAACCCCCTTTGTCGGCCGGGACGACAGAGGGGTCGAGGGC TGCTTCTTCTGCTTCGGAGACCTCTCGTGCCGGACGCCGGGCGCGTTCCGGCTCAAGTTTACGCTCATCATGATC GACCCGATGCGGGCGGGTCTGATCCGACACTTTCCCATCCTGACGGAGACGCTGAGCGACGTGTTTCACGTCTAC AGCGCCAAGGAGTTCCCCGGCATGCTTCCCAGCAGCAACCTGGCCAAGCGGCTCAAGGAGCAGGGCTGCATCATC TCCATCAAGAAGGGAAACGACCGGTCGAGGGGAGGTCGACACCGTCGGGAGGACACGTCGGACGAGAGGGAAGAT GGCGACGTTGACCCGGGGCCGCGGAGACGGCGTGAGGGTCGGGATTAG |