Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5591
Gene name
LocationContig_56:37879..38548
Strand-
Gene length (bp)669
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10615 DUF2470 Domain of unknown function (DUF2470) 5.3E-18 13 85

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

Domain # Start End Length
1 113 132 19
2 147 169 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5591
MASSTQADEEARDRVMRHMNQAHTRELSHMVRHFSGASASEAVNPSLRDLTLQGMRVRAGGNDYAVPFSPPLADW
SEARHRIIAMDAKARQGLGISDVYVTRYVPFRPGLERIVVFYVFFYIVCRLTLPFIQHGSAVWAVIDAIFPGGFS
SYTAVVRFITLPMFAVHFLETVVFDRKLRSHGIDRWSGLWWKWSLDCFVEGVCAFRKLNHIVAETRAAKKKS*
Coding >Ophun1|5591
ATGGCGTCCTCGACGCAAGCCGATGAAGAGGCCCGAGATCGCGTCATGCGCCACATGAACCAGGCACACACCCGC
GAGCTCTCCCATATGGTCCGTCACTTCAGTGGCGCTTCTGCCTCCGAGGCGGTCAATCCCTCGCTGCGCGATTTG
ACGCTGCAGGGAATGAGGGTTCGAGCTGGAGGGAATGATTACGCTGTTCCTTTCTCGCCCCCTCTCGCCGACTGG
TCAGAAGCCCGCCATCGAATCATAGCCATGGACGCCAAGGCTCGTCAGGGGCTCGGCATCAGCGACGTCTACGTG
ACACGTTACGTTCCCTTTCGCCCCGGCTTGGAGCGCATCGTCGTCTTTTACGTCTTCTTCTACATCGTCTGCCGC
CTCACATTGCCCTTTATCCAGCACGGCTCTGCTGTCTGGGCCGTCATCGATGCCATCTTTCCGGGTGGCTTCTCG
TCATATACCGCCGTCGTCCGCTTCATCACTCTACCAATGTTCGCTGTTCACTTTCTCGAGACAGTCGTCTTTGAC
CGGAAGCTGCGGAGCCACGGCATTGACCGCTGGTCTGGCCTGTGGTGGAAGTGGTCGCTCGACTGCTTCGTCGAG
GGCGTCTGCGCCTTTCGGAAACTGAACCACATCGTTGCCGAGACGAGGGCGGCCAAGAAAAAATCATGA
Transcript >Ophun1|5591
ATGGCGTCCTCGACGCAAGCCGATGAAGAGGCCCGAGATCGCGTCATGCGCCACATGAACCAGGCACACACCCGC
GAGCTCTCCCATATGGTCCGTCACTTCAGTGGCGCTTCTGCCTCCGAGGCGGTCAATCCCTCGCTGCGCGATTTG
ACGCTGCAGGGAATGAGGGTTCGAGCTGGAGGGAATGATTACGCTGTTCCTTTCTCGCCCCCTCTCGCCGACTGG
TCAGAAGCCCGCCATCGAATCATAGCCATGGACGCCAAGGCTCGTCAGGGGCTCGGCATCAGCGACGTCTACGTG
ACACGTTACGTTCCCTTTCGCCCCGGCTTGGAGCGCATCGTCGTCTTTTACGTCTTCTTCTACATCGTCTGCCGC
CTCACATTGCCCTTTATCCAGCACGGCTCTGCTGTCTGGGCCGTCATCGATGCCATCTTTCCGGGTGGCTTCTCG
TCATATACCGCCGTCGTCCGCTTCATCACTCTACCAATGTTCGCTGTTCACTTTCTCGAGACAGTCGTCTTTGAC
CGGAAGCTGCGGAGCCACGGCATTGACCGCTGGTCTGGCCTGTGGTGGAAGTGGTCGCTCGACTGCTTCGTCGAG
GGCGTCTGCGCCTTTCGGAAACTGAACCACATCGTTGCCGAGACGAGGGCGGCCAAGAAAAAATCATGA
Gene >Ophun1|5591
ATGGCGTCCTCGACGCAAGCCGATGAAGAGGCCCGAGATCGCGTCATGCGCCACATGAACCAGGCACACACCCGC
GAGCTCTCCCATATGGTCCGTCACTTCAGTGGCGCTTCTGCCTCCGAGGCGGTCAATCCCTCGCTGCGCGATTTG
ACGCTGCAGGGAATGAGGGTTCGAGCTGGAGGGAATGATTACGCTGTTCCTTTCTCGCCCCCTCTCGCCGACTGG
TCAGAAGCCCGCCATCGAATCATAGCCATGGACGCCAAGGCTCGTCAGGGGCTCGGCATCAGCGACGTCTACGTG
ACACGTTACGTTCCCTTTCGCCCCGGCTTGGAGCGCATCGTCGTCTTTTACGTCTTCTTCTACATCGTCTGCCGC
CTCACATTGCCCTTTATCCAGCACGGCTCTGCTGTCTGGGCCGTCATCGATGCCATCTTTCCGGGTGGCTTCTCG
TCATATACCGCCGTCGTCCGCTTCATCACTCTACCAATGTTCGCTGTTCACTTTCTCGAGACAGTCGTCTTTGAC
CGGAAGCTGCGGAGCCACGGCATTGACCGCTGGTCTGGCCTGTGGTGGAAGTGGTCGCTCGACTGCTTCGTCGAG
GGCGTCTGCGCCTTTCGGAAACTGAACCACATCGTTGCCGAGACGAGGGCGGCCAAGAAAAAATCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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