© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5554 |
| Gene name | |
| Location | Contig_555:8721..11422 |
| Strand | + |
| Gene length (bp) | 2701 |
| Transcript length (bp) | 2028 |
| Coding sequence length (bp) | 2028 |
| Protein length (aa) | 676 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04818 | CID | CID domain | 3.0E-23 | 150 | 280 |
| PF15932 | DUF4748 | Domain of unknown function (DUF4748) | 1.3E-20 | 3 | 50 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 25 | 18 |
| Orthofinder run ID | 4 |
| Orthogroup | 4378 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5554 MNTVRSFWIGWGSLCVAGAGAYYLAKREINADRQSKLEQARKKQLETRALDLGATAEHARTDSAGSPSQEACSDP APTRHAPTTESERVSEKSNFLPVVHLAAPPRDGTRVSDIMVVTPDLAVARSNLITLLSRADPESLSRTAAFEFLE LLDNTLDECSRPNVQKCKNWILANVAPSDERAFALGRYLVALSESMEKDFDRPSVRRRRLHVLYIASDVLYHAVI CRDDQHLSRAWEGHLPAMIATASTFEKCPKHLSKVRALIDLWEEKRYLYPDVILKLRDSFTRASDKESGTRIQMS SAALELAKEAPFLIPSTHGEASVPWNDLPAATWLAQLKPGSTQLMRRNLVRPIQLNQGAAPQPLVQVVKDTLQEA KTLYVKDHLRDRTGLDFNLMGETQTQPGTREAATYWGWTPKLCRRVKQGQHCVETIPQNIVPSRSRSKSRASSPR RSRSPKRKYTSRSEASRSPIRRRSRSRSRSPPRRRTGPNTSSNFRRRSPARHDRRNASYSRSRSRSPTPRRRRDA SYSRSRSPAPRRGRTDRRRSYTESASHDSSRSRSYSHGQSRRPHRRSSRSASPPFREGRPYRDPQGDHRSHQPPT NPPPHPQGTTEAFPAPPPPPPLPESTEMTAAQREFRAQEEALERENEEAQRLEDEGRMMEAATKGDLRKDVILAA * |
| Coding | >Ophun1|5554 ATGAATACGGTCCGATCTTTCTGGATTGGATGGGGCTCTCTTTGCGTCGCCGGAGCCGGCGCGTACTACCTGGCC AAACGCGAGATCAACGCCGACCGCCAGTCGAAGCTCGAACAGGCTCGCAAGAAGCAGCTTGAGACTCGGGCATTG GATCTGGGTGCTACCGCCGAGCACGCGAGGACGGATAGCGCTGGCTCACCCAGCCAGGAGGCCTGCTCAGATCCC GCGCCGACGAGACATGCGCCGACGACCGAGTCCGAGCGAGTATCGGAAAAGAGCAACTTCCTCCCCGTCGTCCAT CTGGCCGCGCCGCCACGCGACGGGACGCGTGTCTCCGACATCATGGTCGTGACGCCGGACCTTGCCGTTGCCAGA TCCAATCTTATAACCCTGCTGTCGCGCGCCGATCCTGAATCCTTGAGTCGGACAGCGGCTTTCGAATTTCTCGAG CTACTCGACAATACGCTCGATGAGTGTTCGCGGCCCAACGTTCAGAAATGCAAGAACTGGATCCTCGCCAACGTC GCCCCCTCCGACGAACGAGCCTTTGCGCTGGGAAGATACCTCGTCGCCCTTTCAGAGAGCATGGAGAAGGACTTT GACCGTCCCAGCGTCCGACGTCGTCGTCTCCACGTTCTCTACATCGCCAGCGACGTCCTGTACCATGCCGTCATC TGCCGCGACGACCAGCACCTCTCCCGCGCCTGGGAAGGCCATCTGCCGGCCATGATTGCGACGGCATCCACGTTT GAGAAGTGTCCCAAGCACCTTTCCAAGGTCCGCGCCCTCATTGATCTTTGGGAAGAGAAGCGCTATCTGTACCCG GACGTGATTCTCAAACTCAGAGACTCCTTCACTCGCGCCTCCGACAAGGAGTCCGGCACTCGAATTCAGATGTCG TCGGCTGCCCTTGAGCTCGCCAAGGAAGCGCCCTTCCTGATTCCTTCGACTCACGGCGAAGCTTCCGTGCCGTGG AACGACTTGCCCGCCGCGACTTGGCTTGCACAGCTGAAGCCCGGCTCAACACAGCTCATGCGCCGCAACCTGGTG CGGCCCATCCAGCTCAACCAAGGTGCCGCGCCTCAGCCACTGGTCCAAGTGGTCAAAGATACGCTCCAAGAAGCC AAAACTCTGTACGTCAAGGATCATCTTCGAGACAGGACAGGCCTCGACTTCAACCTCATGGGAGAAACTCAAACC CAGCCCGGCACTCGCGAAGCCGCTACCTATTGGGGCTGGACGCCCAAGCTCTGCCGTCGCGTCAAGCAAGGCCAA CACTGCGTCGAGACCATCCCTCAGAACATCGTTCCCTCCCGCTCGCGCTCCAAATCCAGAGCCTCATCTCCGCGA CGAAGCCGTTCCCCCAAGCGAAAGTACACATCCCGATCCGAAGCAAGCCGCAGCCCCATCCGACGCCGAAGCCGC AGCCGCAGCCGCAGCCCCCCCCGTCGCCGAACCGGCCCCAACACAAGCAGCAACTTCAGACGACGCAGTCCAGCC CGTCACGATCGCAGAAACGCCTCGTACAGCCGCAGCCGCAGCCGCAGCCCGACTCCGCGCCGACGCAGAGACGCC TCCTACAGCCGCAGCCGTAGTCCGGCTCCGCGGCGGGGCCGAACTGACCGTCGACGCTCCTACACCGAGTCCGCA TCGCACGACTCTTCTCGATCGCGCTCCTACTCACACGGACAATCAAGACGTCCTCACCGACGCTCCTCTCGCTCC GCCAGCCCTCCCTTCCGCGAAGGCCGCCCATACCGCGACCCCCAAGGCGATCACCGCTCCCACCAACCACCCACC AACCCACCGCCTCACCCCCAAGGCACCACCGAAGCCTTTCCCGCTCCGCCCCCTCCGCCTCCCCTGCCGGAAAGT ACCGAGATGACGGCTGCGCAGCGCGAGTTCCGCGCCCAGGAGGAGGCGCTCGAGCGGGAGAATGAGGAAGCGCAG AGGCTCGAGGACGAGGGAAGGATGATGGAGGCGGCGACAAAGGGCGACTTGCGCAAGGATGTTATCCTCGCGGCG TGA |
| Transcript | >Ophun1|5554 ATGAATACGGTCCGATCTTTCTGGATTGGATGGGGCTCTCTTTGCGTCGCCGGAGCCGGCGCGTACTACCTGGCC AAACGCGAGATCAACGCCGACCGCCAGTCGAAGCTCGAACAGGCTCGCAAGAAGCAGCTTGAGACTCGGGCATTG GATCTGGGTGCTACCGCCGAGCACGCGAGGACGGATAGCGCTGGCTCACCCAGCCAGGAGGCCTGCTCAGATCCC GCGCCGACGAGACATGCGCCGACGACCGAGTCCGAGCGAGTATCGGAAAAGAGCAACTTCCTCCCCGTCGTCCAT CTGGCCGCGCCGCCACGCGACGGGACGCGTGTCTCCGACATCATGGTCGTGACGCCGGACCTTGCCGTTGCCAGA TCCAATCTTATAACCCTGCTGTCGCGCGCCGATCCTGAATCCTTGAGTCGGACAGCGGCTTTCGAATTTCTCGAG CTACTCGACAATACGCTCGATGAGTGTTCGCGGCCCAACGTTCAGAAATGCAAGAACTGGATCCTCGCCAACGTC GCCCCCTCCGACGAACGAGCCTTTGCGCTGGGAAGATACCTCGTCGCCCTTTCAGAGAGCATGGAGAAGGACTTT GACCGTCCCAGCGTCCGACGTCGTCGTCTCCACGTTCTCTACATCGCCAGCGACGTCCTGTACCATGCCGTCATC TGCCGCGACGACCAGCACCTCTCCCGCGCCTGGGAAGGCCATCTGCCGGCCATGATTGCGACGGCATCCACGTTT GAGAAGTGTCCCAAGCACCTTTCCAAGGTCCGCGCCCTCATTGATCTTTGGGAAGAGAAGCGCTATCTGTACCCG GACGTGATTCTCAAACTCAGAGACTCCTTCACTCGCGCCTCCGACAAGGAGTCCGGCACTCGAATTCAGATGTCG TCGGCTGCCCTTGAGCTCGCCAAGGAAGCGCCCTTCCTGATTCCTTCGACTCACGGCGAAGCTTCCGTGCCGTGG AACGACTTGCCCGCCGCGACTTGGCTTGCACAGCTGAAGCCCGGCTCAACACAGCTCATGCGCCGCAACCTGGTG CGGCCCATCCAGCTCAACCAAGGTGCCGCGCCTCAGCCACTGGTCCAAGTGGTCAAAGATACGCTCCAAGAAGCC AAAACTCTGTACGTCAAGGATCATCTTCGAGACAGGACAGGCCTCGACTTCAACCTCATGGGAGAAACTCAAACC CAGCCCGGCACTCGCGAAGCCGCTACCTATTGGGGCTGGACGCCCAAGCTCTGCCGTCGCGTCAAGCAAGGCCAA CACTGCGTCGAGACCATCCCTCAGAACATCGTTCCCTCCCGCTCGCGCTCCAAATCCAGAGCCTCATCTCCGCGA CGAAGCCGTTCCCCCAAGCGAAAGTACACATCCCGATCCGAAGCAAGCCGCAGCCCCATCCGACGCCGAAGCCGC AGCCGCAGCCGCAGCCCCCCCCGTCGCCGAACCGGCCCCAACACAAGCAGCAACTTCAGACGACGCAGTCCAGCC CGTCACGATCGCAGAAACGCCTCGTACAGCCGCAGCCGCAGCCGCAGCCCGACTCCGCGCCGACGCAGAGACGCC TCCTACAGCCGCAGCCGTAGTCCGGCTCCGCGGCGGGGCCGAACTGACCGTCGACGCTCCTACACCGAGTCCGCA TCGCACGACTCTTCTCGATCGCGCTCCTACTCACACGGACAATCAAGACGTCCTCACCGACGCTCCTCTCGCTCC GCCAGCCCTCCCTTCCGCGAAGGCCGCCCATACCGCGACCCCCAAGGCGATCACCGCTCCCACCAACCACCCACC AACCCACCGCCTCACCCCCAAGGCACCACCGAAGCCTTTCCCGCTCCGCCCCCTCCGCCTCCCCTGCCGGAAAGT ACCGAGATGACGGCTGCGCAGCGCGAGTTCCGCGCCCAGGAGGAGGCGCTCGAGCGGGAGAATGAGGAAGCGCAG AGGCTCGAGGACGAGGGAAGGATGATGGAGGCGGCGACAAAGGGCGACTTGCGCAAGGATGTTATCCTCGCGGCG TGA |
| Gene | >Ophun1|5554 ATGAATACGGTGCGTGCAGATCTCCCGCCCCTCCTCTGCTACAGGCAACGTGAGCTCCGTCGCTAACCGCCTATC GCGCCAGGTCCGATCTTTCTGGTGCGCCGCTCCGCCAGCCTCGCTACTCTCGCATCGCTGACGCTCTCCTGGATG TAGGATTGGATGGGGCTCTCTTTGCGTCGGTAGGGCTCCTCGTTTCGTCCCGTCCCGTCCCGTTGTCTGCAACCT GCTAAAGATGCACGTCCGTTACAGCCGGAGCCGGCGCGTACTACCTGGCCAAACGCGAGATCAACGCCGACCGCC AGTCGAAGCTCGAACAGGCTCGCAAGAAGCAGCTTGAGACTCGGGCATTGGATCTGGGTGCTACCGCCGAGCACG CGAGGACGGATAGCGCTGGCTCACCCAGCCAGGAGGCCTGCTCAGATCCCGCGCCGACGAGACATGCGCCGACGA CCGAGTCCGAGCGAGTATCGGAAAAGAGCAAGTACGAGAGCAGCGTGCCGTACCGGAGACCGAAAGGCGATCGCT TCTCTTGAGGGATGGAGGGTATCTGGAGGATGCGTGATGGATGTATGAACCTATATTTGTAGTCGACAGTGGATA TGTTCTCAACACGGATATGAAAACTACTCTTCGCTCTATATTTCTTGCGACTGGACTATCGCCACTTCAGAACAT CTGGCTCCTCGCTTTCGTTTCCTTTGGACGAACCTCTCGCCATCCTCCTACACCTCGACTCGCAGGCCCACTCAC CAGCTCTTCCAGTCCAGCAAGGCTGCAGCTCGACCATTTAACCGAAACTTAGCCGCTCCACCAAAACTTCCGGCT GCCATCCCAAATCTGCACCAAAAGCTTTCCACTTCTCTAACGGCAAGCTTCAGCTTCCTCCCCGTCGTCCATCTG GCCGCGCCGCCACGCGACGGGACGCGTGTCTCCGACATCATGGTCGTGACGCCGGACCTTGCCGTTGCCAGATCC AATCTTATAACCCTGCTGTCGCGCGCCGATCCTGAATCCTTGAGTCGGACAGCGGCTTTCGAATTTCTCGAGCTA CTCGACAATACGCTCGATGAGTGTTCGCGGCCCAACGTTCAGGTAATCTTCCTTTCTGCTTTTTCTACGTTTCTT TCTTTCTTGATTCTAGACCATGGCTAACGCGTAAGTCGAACAGAAATGCAAGAACTGGATCCTCGCCAACGTCGC CCCCTCCGACGAACGAGCCTTTGCGCTGGGAAGATACCTCGTCGCCCTTTCAGAGAGCATGGAGAAGGACTTTGA CCGTCCCAGCGTCCGACGTCGTCGTCTCCACGTTCTCTACATCGCCAGCGACGTCCTGTACCATGCCGTCATCTG CCGCGACGACCAGCACCTCTCCCGCGCCTGGGAAGGCCATCTGCCGGCCATGATTGCGACGGCATCCACGTTTGA GAAGTGTCCCAAGCACCTTTCCAAGGTCCGCGCCCTCATTGATCTTTGGGAAGAGAAGCGCTATCTGTACCCGGA CGTGATTCTCAAACTCAGAGACTCCTTCACTCGCGCCTCCGACAAGGAGTCCGGCACTCGAATTCAGATGTCGTC GGCTGCCCTTGAGCTCGCCAAGGAAGCGCCCTTCCTGATTCCTTCGACTCACGGCGAAGCTTCCGTGCCGTGGAA CGACTTGCCCGCCGCGACTTGGCTTGCACAGCTGAAGCCCGGCTCAACACAGCTCATGCGCCGCAACCTGGTGCG GCCCATCCAGCTCAACCAAGGTGCCGCGCCTCAGCCACTGGTCCAAGTGGTCAAAGATACGCTCCAAGAAGCCAA AACTCTGTACGTCAAGGATCATCTTCGAGACAGGACAGGCCTCGACTTCAACCTCATGGGAGAAACTCAAACCCA GCCCGGCACTCGCGAAGCCGCTACCTATTGGGGCTGGACGCCCAAGCTCTGCCGTCGCGTCAAGCAAGGCCAACA CTGCGTCGAGACCATCCCTCAGAACATCGTTCCCTCCCGCTCGCGCTCCAAATCCAGAGCCTCATCTCCGCGACG AAGCCGTTCCCCCAAGCGAAAGTACACATCCCGATCCGAAGCAAGCCGCAGCCCCATCCGACGCCGAAGCCGCAG CCGCAGCCGCAGCCCCCCCCGTCGCCGAACCGGCCCCAACACAAGCAGCAACTTCAGACGACGCAGTCCAGCCCG TCACGATCGCAGAAACGCCTCGTACAGCCGCAGCCGCAGCCGCAGCCCGACTCCGCGCCGACGCAGAGACGCCTC CTACAGCCGCAGCCGTAGTCCGGCTCCGCGGCGGGGCCGAACTGACCGTCGACGCTCCTACACCGAGTCCGCATC GCACGACTCTTCTCGATCGCGCTCCTACTCACACGGACAATCAAGACGTCCTCACCGACGCTCCTCTCGCTCCGC CAGCCCTCCCTTCCGCGAAGGCCGCCCATACCGCGACCCCCAAGGCGATCACCGCTCCCACCAACCACCCACCAA CCCACCGCCTCACCCCCAAGGCACCACCGAAGCCTTTCCCGCTCCGCCCCCTCCGCCTCCCCTGCCGGAAAGTAC CGAGATGACGGCTGCGCAGCGCGAGTTCCGCGCCCAGGAGGAGGCGCTCGAGCGGGAGAATGAGGAAGCGCAGAG GCTCGAGGACGAGGGAAGGATGATGGAGGCGGCGACAAAGGGCGACTTGCGCAAGGATGTTATCCTCGCGGCGTG A |