© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|5552 |
| Gene name | |
| Location | Contig_555:2994..4152 |
| Strand | - |
| Gene length (bp) | 1158 |
| Transcript length (bp) | 1095 |
| Coding sequence length (bp) | 1095 |
| Protein length (aa) | 365 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00650 | CRAL_TRIO | CRAL/TRIO domain | 3.5E-37 | 131 | 275 |
| PF03765 | CRAL_TRIO_N | CRAL/TRIO, N-terminal domain | 8.7E-15 | 66 | 107 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UU99|YJX4_SCHPO | CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1 | 12 | 322 | 2.0E-96 |
| sp|P53860|PDR16_YEAST | Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1 | 5 | 331 | 4.0E-90 |
| sp|P53844|PDR17_YEAST | Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1 | 28 | 325 | 5.0E-69 |
| sp|Q10138|YAS2_SCHPO | CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1 | 88 | 304 | 4.0E-17 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 83 | 275 | 8.0E-17 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UU99|YJX4_SCHPO | CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1 | 12 | 322 | 2.0E-96 |
| sp|P53860|PDR16_YEAST | Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1 | 5 | 331 | 4.0E-90 |
| sp|P53844|PDR17_YEAST | Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1 | 28 | 325 | 5.0E-69 |
| sp|Q10138|YAS2_SCHPO | CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1 | 88 | 304 | 4.0E-17 |
| sp|P24280|SEC14_YEAST | SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 | 83 | 275 | 8.0E-17 |
| sp|Q55CU8|RSC5_DICDI | Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1 | 66 | 286 | 2.0E-16 |
| sp|P53989|SEC14_CANGA | SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 | 83 | 275 | 9.0E-16 |
| sp|Q757H2|CSR1_ASHGO | Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2 | 88 | 282 | 3.0E-15 |
| sp|Q56Z59|PATL3_ARATH | Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 | 87 | 308 | 4.0E-15 |
| sp|Q9M0R2|PATL5_ARATH | Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 | 87 | 310 | 8.0E-15 |
| sp|P46250|SEC14_CANAL | SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 | 88 | 278 | 3.0E-14 |
| sp|Q75DK1|SEC14_ASHGO | SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 | 83 | 278 | 5.0E-14 |
| sp|P24859|SEC14_KLULA | SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 | 83 | 268 | 2.0E-13 |
| sp|Q94C59|PATL4_ARATH | Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 | 87 | 285 | 8.0E-13 |
| sp|Q10137|SEC14_SCHPO | Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1 | 88 | 253 | 1.0E-12 |
| sp|P33324|YKJ1_YEAST | CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 | 83 | 275 | 1.0E-12 |
| sp|Q9SCU1|PATL6_ARATH | Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 | 87 | 275 | 4.0E-12 |
| sp|P45816|SEC14_YARLI | SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 | 87 | 268 | 5.0E-12 |
| sp|Q16KN5|RETM_AEDAE | Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1 | 86 | 268 | 1.0E-10 |
| sp|Q9VMD6|RETM_DROME | Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2 | 84 | 255 | 1.0E-10 |
| sp|Q92503|S14L1_HUMAN | SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 | 86 | 253 | 2.0E-10 |
| sp|Q03606|YN02_CAEEL | CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=3 SV=3 | 88 | 253 | 4.0E-10 |
| sp|Q06705|CSR1_YEAST | Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1 | 87 | 285 | 7.0E-10 |
| sp|Q7PWB1|RETM_ANOGA | Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 | 86 | 255 | 1.0E-09 |
| sp|Q29JQ0|RETM_DROPS | Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1 | 84 | 255 | 8.0E-09 |
| sp|P12271|RLBP1_HUMAN | Retinaldehyde-binding protein 1 OS=Homo sapiens GN=RLBP1 PE=1 SV=2 | 88 | 277 | 1.0E-08 |
| sp|O43304|S14L5_HUMAN | SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3 | 86 | 253 | 7.0E-08 |
| sp|Q0V9N0|S14L5_XENTR | SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1 | 86 | 253 | 9.0E-08 |
| sp|Q56ZI2|PATL2_ARATH | Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2 | 74 | 275 | 1.0E-07 |
| sp|Q9HDZ5|YKP9_SCHPO | CRAL-TRIO domain-containing protein C589.09, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.09 PE=3 SV=1 | 88 | 263 | 3.0E-06 |
| sp|Q7S4C1|SFH5_NEUCR | Phosphatidylinositol transfer protein sfh-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sfh-5 PE=3 SV=1 | 1 | 253 | 9.0E-06 |
| Orthofinder run ID | 4 |
| Orthogroup | 1032 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5552 MEPTESPPRKTPLEEPLPDCKPAPSATLTAEQETKYEALLGRAKALDEIRCDKDKEKAKAKGGKSEEEKSKSGPV TEAERRWLTRECLLRYLRATKWNVDDAAKRLVSTLAWRREYGIDEFTAEYISPEQETGKQMIVGFDRVGRPCLYL NPGRQNTDASPRQLHHMFYMMERVMELMPAGVETLSLLINFKPTKKRQNTSVPVMTAREVLHILQNHYPERLGKA LIINVPWVVSGFFKVITPFIDPVTRDKLKFNEDMRLYVPPEQLWSADWGGDMDFEYEHATYWPALHELCRARREL RIKRWEAAGGIIGESEVYLAGGTDESVGGVRYRGDGDGEVDAVEEKMAAVQVGGGGVAEVAGEV* |
| Coding | >Ophun1|5552 ATGGAGCCAACGGAGAGCCCGCCACGGAAGACGCCGCTGGAAGAGCCGTTGCCAGATTGCAAACCTGCGCCCAGC GCGACGCTCACGGCAGAGCAGGAGACCAAGTACGAGGCGCTTCTGGGGCGGGCCAAGGCGCTGGACGAGATTCGG TGCGACAAGGACAAGGAAAAGGCAAAGGCCAAGGGCGGGAAGAGCGAGGAGGAGAAGAGCAAGTCGGGTCCCGTG ACGGAGGCGGAGCGGCGATGGCTCACGCGCGAATGCCTGCTTCGCTACCTGCGGGCGACGAAGTGGAACGTGGAC GATGCGGCGAAACGGCTCGTATCGACGCTGGCGTGGAGACGCGAGTATGGCATCGACGAGTTTACGGCTGAGTAC ATATCGCCTGAGCAGGAGACGGGCAAGCAGATGATTGTCGGCTTCGATCGCGTTGGGAGGCCGTGTCTGTATCTC AACCCGGGGAGGCAGAATACTGACGCTTCGCCGCGGCAGCTGCATCACATGTTTTATATGATGGAGCGGGTCATG GAGTTGATGCCGGCCGGAGTCGAGACGCTGAGCCTGCTCATCAACTTTAAGCCGACGAAGAAGAGGCAGAATACG AGCGTGCCGGTCATGACGGCGAGGGAGGTGTTGCATATCCTGCAGAATCACTACCCCGAGAGGCTGGGAAAGGCG CTGATTATCAACGTCCCTTGGGTCGTCAGCGGCTTCTTCAAGGTCATCACGCCCTTTATCGACCCCGTGACGCGC GACAAGCTCAAGTTCAACGAGGATATGCGGCTGTACGTGCCGCCGGAGCAGCTCTGGAGCGCCGACTGGGGCGGC GACATGGACTTTGAGTACGAGCACGCGACGTACTGGCCCGCGCTGCACGAGTTGTGCCGGGCGAGGAGGGAGCTG AGGATCAAGAGGTGGGAGGCGGCTGGGGGAATCATCGGGGAGTCGGAGGTGTATCTCGCCGGCGGGACGGACGAG AGCGTCGGGGGGGTTCGGTATCGGGGGGATGGGGATGGGGAGGTGGATGCCGTGGAGGAGAAGATGGCGGCGGTG CAGGTGGGAGGCGGGGGGGTCGCCGAGGTGGCTGGCGAGGTGTAG |
| Transcript | >Ophun1|5552 ATGGAGCCAACGGAGAGCCCGCCACGGAAGACGCCGCTGGAAGAGCCGTTGCCAGATTGCAAACCTGCGCCCAGC GCGACGCTCACGGCAGAGCAGGAGACCAAGTACGAGGCGCTTCTGGGGCGGGCCAAGGCGCTGGACGAGATTCGG TGCGACAAGGACAAGGAAAAGGCAAAGGCCAAGGGCGGGAAGAGCGAGGAGGAGAAGAGCAAGTCGGGTCCCGTG ACGGAGGCGGAGCGGCGATGGCTCACGCGCGAATGCCTGCTTCGCTACCTGCGGGCGACGAAGTGGAACGTGGAC GATGCGGCGAAACGGCTCGTATCGACGCTGGCGTGGAGACGCGAGTATGGCATCGACGAGTTTACGGCTGAGTAC ATATCGCCTGAGCAGGAGACGGGCAAGCAGATGATTGTCGGCTTCGATCGCGTTGGGAGGCCGTGTCTGTATCTC AACCCGGGGAGGCAGAATACTGACGCTTCGCCGCGGCAGCTGCATCACATGTTTTATATGATGGAGCGGGTCATG GAGTTGATGCCGGCCGGAGTCGAGACGCTGAGCCTGCTCATCAACTTTAAGCCGACGAAGAAGAGGCAGAATACG AGCGTGCCGGTCATGACGGCGAGGGAGGTGTTGCATATCCTGCAGAATCACTACCCCGAGAGGCTGGGAAAGGCG CTGATTATCAACGTCCCTTGGGTCGTCAGCGGCTTCTTCAAGGTCATCACGCCCTTTATCGACCCCGTGACGCGC GACAAGCTCAAGTTCAACGAGGATATGCGGCTGTACGTGCCGCCGGAGCAGCTCTGGAGCGCCGACTGGGGCGGC GACATGGACTTTGAGTACGAGCACGCGACGTACTGGCCCGCGCTGCACGAGTTGTGCCGGGCGAGGAGGGAGCTG AGGATCAAGAGGTGGGAGGCGGCTGGGGGAATCATCGGGGAGTCGGAGGTGTATCTCGCCGGCGGGACGGACGAG AGCGTCGGGGGGGTTCGGTATCGGGGGGATGGGGATGGGGAGGTGGATGCCGTGGAGGAGAAGATGGCGGCGGTG CAGGTGGGAGGCGGGGGGGTCGCCGAGGTGGCTGGCGAGGTGTAG |
| Gene | >Ophun1|5552 ATGGAGCCAACGGAGAGCCCGCCACGGAAGACGCCGCTGGAAGAGCCGTTGCCAGATTGCAAACCTGCGCCCAGC GCGACGCTCACGGCAGAGCAGGAGACCAAGTACGAGGCGCTTCTGGGGCGGGCCAAGGCGCTGGACGAGATTCGG TGCGACAAGGACAAGGAAAAGGCAAAGGCCAAGGGCGGGAAGAGCGAGGAGGAGAAGAGCAAGTCGGGTCCCGTG ACGGAGGCGGAGCGGCGATGGCTCACGCGCGAATGCCTGCTTCGCTACCTGCGGGCGACGAAGTGGAACGTGGAC GATGCGGCGAAACGGCTCGTATCGACGCTGGCGTGGAGACGCGAGTATGGCATCGACGAGTTTACGGCTGAGTAC ATATCGCCTGAGCAGGAGACGGGCAAGCAGATGATTGTCGGCTTCGATCGCGTTGGGAGGCCGTGTCTGTATCTC AACCCGGGGAGGCAGAATACTGACGCTTCGCCGCGGCAGCTGCATCACATGTTTTATATGATGGAGCGGGTCATG GAGTTGATGCCGGCCGGAGTCGAGACGCTGAGCCTGCTCATCAACTTTAAGCCGACGAAGAAGAGGCAGAATACG AGCGTGCCGGTCATGACGGCGAGGGAGGTGTTGCATATCCTGCAGAATCACTACCCCGAGAGGCTGGGAAAGGCG CTGATTATCAACGGTGAGTGCTGGACGAATCCTTCCATCTCTTTGCTGGGAGTGTGTTGCTGAGGCGGTGGAGCA GTCCCTTGGGTCGTCAGCGGCTTCTTCAAGGTCATCACGCCCTTTATCGACCCCGTGACGCGCGACAAGCTCAAG TTCAACGAGGATATGCGGCTGTACGTGCCGCCGGAGCAGCTCTGGAGCGCCGACTGGGGCGGCGACATGGACTTT GAGTACGAGCACGCGACGTACTGGCCCGCGCTGCACGAGTTGTGCCGGGCGAGGAGGGAGCTGAGGATCAAGAGG TGGGAGGCGGCTGGGGGAATCATCGGGGAGTCGGAGGTGTATCTCGCCGGCGGGACGGACGAGAGCGTCGGGGGG GTTCGGTATCGGGGGGATGGGGATGGGGAGGTGGATGCCGTGGAGGAGAAGATGGCGGCGGTGCAGGTGGGAGGC GGGGGGGTCGCCGAGGTGGCTGGCGAGGTGTAG |