Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5529
Gene name
LocationContig_550:4961..6684
Strand+
Gene length (bp)1723
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04811 Sec23_trunk Sec23/Sec24 trunk domain 1.8E-52 18 182
PF08033 Sec23_BS Sec23/Sec24 beta-sandwich domain 2.3E-30 193 296
PF04815 Sec23_helical Sec23/Sec24 helical domain 6.4E-26 310 408
PF00626 Gelsolin Gelsolin repeat 3.5E-06 425 485

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q3SZN2|SC23B_BOVIN Protein transport protein Sec23B OS=Bos taurus GN=SEC23B PE=2 SV=1 2 494 0.0E+00
sp|A5E7S3|SEC23_LODEL Protein transport protein SEC23 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|Q5A455|SEC23_CANAL Protein transport protein SEC23 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|Q5R9P3|SC23A_PONAB Protein transport protein Sec23A OS=Pongo abelii GN=SEC23A PE=2 SV=1 4 494 0.0E+00
sp|Q15436|SC23A_HUMAN Protein transport protein Sec23A OS=Homo sapiens GN=SEC23A PE=1 SV=2 4 494 0.0E+00
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Swissprot ID Swissprot Description Start End E-value
sp|Q3SZN2|SC23B_BOVIN Protein transport protein Sec23B OS=Bos taurus GN=SEC23B PE=2 SV=1 2 494 0.0E+00
sp|A5E7S3|SEC23_LODEL Protein transport protein SEC23 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|Q5A455|SEC23_CANAL Protein transport protein SEC23 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|Q5R9P3|SC23A_PONAB Protein transport protein Sec23A OS=Pongo abelii GN=SEC23A PE=2 SV=1 4 494 0.0E+00
sp|Q15436|SC23A_HUMAN Protein transport protein Sec23A OS=Homo sapiens GN=SEC23A PE=1 SV=2 4 494 0.0E+00
sp|Q7SZE5|SC23A_DANRE Protein transport protein Sec23A OS=Danio rerio GN=sec23a PE=2 SV=1 7 494 0.0E+00
sp|A2VDL8|SC23A_BOVIN Protein transport protein Sec23A OS=Bos taurus GN=SEC23A PE=2 SV=1 4 494 0.0E+00
sp|Q05AS9|SC23A_XENTR Protein transport protein Sec23A OS=Xenopus tropicalis GN=sec23a PE=2 SV=1 17 494 0.0E+00
sp|Q6FSI6|SC232_CANGA Protein transport protein SEC23-2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC232 PE=3 SV=1 19 494 0.0E+00
sp|Q01405|SC23A_MOUSE Protein transport protein Sec23A OS=Mus musculus GN=Sec23a PE=1 SV=2 4 494 0.0E+00
sp|Q2HB00|SEC23_CHAGB Protein transport protein SEC23 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=SEC23 PE=3 SV=1 1 494 0.0E+00
sp|Q5ZK03|SC23A_CHICK Protein transport protein Sec23A OS=Gallus gallus GN=SEC23A PE=2 SV=1 2 501 0.0E+00
sp|Q9D662|SC23B_MOUSE Protein transport protein Sec23B OS=Mus musculus GN=Sec23b PE=1 SV=1 3 501 0.0E+00
sp|Q758M7|SEC23_ASHGO Protein transport protein SEC23 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|Q15437|SC23B_HUMAN Protein transport protein Sec23B OS=Homo sapiens GN=SEC23B PE=1 SV=2 3 501 0.0E+00
sp|Q6CPH3|SEC23_KLULA Protein transport protein SEC23 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC23 PE=3 SV=1 19 494 0.0E+00
sp|P15303|SEC23_YEAST Protein transport protein SEC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC23 PE=1 SV=1 19 494 0.0E+00
sp|Q5R5G2|SC23B_PONAB Protein transport protein Sec23B OS=Pongo abelii GN=SEC23B PE=2 SV=1 3 501 0.0E+00
sp|Q6FSK3|SC231_CANGA Protein transport protein SEC23-1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC231 PE=3 SV=1 7 494 0.0E+00
sp|O94672|SC232_SCHPO Protein transport protein sec23-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec232 PE=1 SV=1 16 494 0.0E+00
sp|A3GFA2|SEC23_PICST Protein transport protein SEC23 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=SEC23 PE=3 SV=2 2 494 0.0E+00
sp|Q9C284|SEC23_NEUCR Protein transport protein sec23 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec23-1 PE=3 SV=1 1 494 0.0E+00
sp|A4R1J7|SEC23_MAGO7 Protein transport protein SEC23 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=SEC23 PE=3 SV=1 1 494 0.0E+00
sp|Q0CUU1|SEC23_ASPTN Protein transport protein sec23 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec23 PE=3 SV=1 1 494 0.0E+00
sp|A2Q8L1|SEC23_ASPNC Protein transport protein sec23 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec23 PE=3 SV=1 1 494 0.0E+00
sp|Q2URM9|SEC23_ASPOR Protein transport protein sec23 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=sec23 PE=3 SV=1 1 494 0.0E+00
sp|Q4WK80|SEC23_ASPFU Protein transport protein sec23 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=sec23 PE=3 SV=2 2 494 0.0E+00
sp|Q0US25|SEC23_PHANO Protein transport protein SEC23 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SEC23 PE=3 SV=2 2 494 0.0E+00
sp|A1CRW7|SEC23_ASPCL Protein transport protein sec23 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=sec23 PE=3 SV=1 2 494 0.0E+00
sp|A1D4S4|SEC23_NEOFI Protein transport protein sec23 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sec23 PE=3 SV=1 2 494 0.0E+00
sp|Q5BGR9|SEC23_EMENI Protein transport protein sec23 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec23 PE=3 SV=1 3 494 0.0E+00
sp|Q1DY01|SEC23_COCIM Protein transport protein SEC23 OS=Coccidioides immitis (strain RS) GN=SEC23 PE=3 SV=1 3 494 0.0E+00
sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SEC23 PE=3 SV=1 8 494 0.0E+00
sp|P0CR38|SEC23_CRYNJ Protein transport protein SEC23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=SEC23 PE=3 SV=1 2 494 0.0E+00
sp|P0CR39|SEC23_CRYNB Protein transport protein SEC23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=SEC23 PE=3 SV=1 2 494 0.0E+00
sp|O74873|SC231_SCHPO Protein transport protein sec23-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec231 PE=3 SV=1 4 494 0.0E+00
sp|Q6C5L5|SEC23_YARLI Protein transport protein SEC23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC23 PE=3 SV=2 8 494 0.0E+00
sp|A5DA00|SEC23_PICGU Protein transport protein SEC23 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=SEC23 PE=3 SV=3 20 494 0.0E+00
sp|Q6BQT6|SEC23_DEBHA Protein transport protein SEC23 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SEC23 PE=3 SV=1 12 494 0.0E+00
sp|Q54T59|SEC23_DICDI Protein transport protein SEC23 OS=Dictyostelium discoideum GN=sec23 PE=3 SV=2 12 494 3.0E-171
sp|Q8SQX2|SEC23_ENCCU Protein transport protein SEC23 OS=Encephalitozoon cuniculi (strain GB-M1) GN=SEC23 PE=1 SV=1 20 494 2.0E-85
sp|P38769|YHJ5_YEAST Uncharacterized protein YHR035W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR035W PE=1 SV=1 50 225 4.0E-12
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GO

GO Term Description Terminal node
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Yes
GO:0006886 intracellular protein transport Yes
GO:0030127 COPII vesicle coat Yes
GO:0033036 macromolecule localization No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0008104 protein localization No
GO:0046907 intracellular transport No
GO:0051234 establishment of localization No
GO:0098796 membrane protein complex No
GO:0032991 protein-containing complex No
GO:0048193 Golgi vesicle transport No
GO:0051649 establishment of localization in cell No
GO:0071705 nitrogen compound transport No
GO:0016192 vesicle-mediated transport No
GO:0051179 localization No
GO:0030120 vesicle coat No
GO:0070727 cellular macromolecule localization No
GO:0005575 cellular_component No
GO:0015031 protein transport No
GO:0030117 membrane coat No
GO:0045184 establishment of protein localization No
GO:0008150 biological_process No
GO:0051641 cellular localization No
GO:0071702 organic substance transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5529
MRPGMQSQPGRQAAGGPASRFLLPVQQAEFQLTKALESLQKDPWPTANDRRSLRCTGVALSVAIGLMESSFQNSG
GRIMLFAGGPATEGPGMVVGAELREPIRSHHDIDRDNVKYYKKALKFYENLAKRTAHNGHIIDIFAGSLDQVGLL
EMKGLCNSTGGHMILTDSFTSSMFKQSFIRVFEKDGDDNLLMGFNATLEVLTTKELKVTGLIGHAVSLNKKSISV
GETECGIGNTCSWKMCGIDPKSSYGIYFEVAGPGQPTHQQSPQKGIMQFLTYYQHASGQFHLRVTTISRTLSGPA
GDPAVAQSFDQEAAAVLMSRIAVFKSEVDDGPDVLRWVDRMLIRLCSRFADYRKDDSSSFRLERNFTLYPQFMFH
LRRSQFLQVFNNSPDETAFYRHVLNHEDVSNSLIMIQPTLDSYTFDQDGGVPVLLDSASIQPTHILLLDTFFHIL
IFHGETIAEWRKAGYQDQEGYENFATLLEQPKEDARDLITDRFPGYVGTNYLH*
Coding >Ophun1|5529
ATGCGGCCTGGGATGCAGTCTCAACCGGGACGCCAGGCTGCCGGGGGCCCAGCGTCCCGCTTCCTACTTCCCGTG
CAACAAGCCGAATTTCAGCTTACGAAGGCCCTCGAGAGTCTTCAGAAAGATCCCTGGCCGACGGCAAACGACCGC
CGAAGCCTTCGATGCACTGGCGTGGCCCTGAGCGTCGCCATAGGCTTAATGGAGTCTTCCTTCCAAAACTCTGGA
GGTCGCATTATGCTCTTTGCAGGTGGCCCAGCTACCGAGGGGCCAGGCATGGTCGTGGGTGCAGAACTCCGCGAA
CCTATTCGATCCCACCATGACATAGACCGGGATAACGTCAAGTATTACAAGAAAGCTTTGAAGTTCTATGAAAAC
CTGGCGAAACGCACTGCCCATAACGGTCACATCATTGATATCTTTGCTGGATCCTTGGACCAGGTCGGACTTCTG
GAAATGAAAGGCCTCTGCAACTCCACTGGCGGCCACATGATATTGACAGACAGCTTCACCTCCTCCATGTTCAAG
CAGTCATTTATCCGGGTATTCGAAAAGGACGGCGACGATAATCTACTCATGGGATTCAATGCCACGTTGGAGGTC
TTGACCACCAAAGAACTCAAGGTGACAGGCCTCATTGGACACGCCGTCTCTCTGAACAAAAAGTCGATCTCCGTC
GGAGAAACAGAATGCGGGATTGGAAATACGTGTTCTTGGAAGATGTGTGGGATCGATCCCAAGTCCAGCTACGGC
ATCTATTTCGAAGTTGCTGGTCCAGGTCAACCAACGCATCAGCAATCGCCCCAGAAAGGCATAATGCAGTTTCTC
ACATACTATCAACATGCTTCGGGCCAATTCCACCTTCGAGTCACAACAATATCTCGGACCTTGAGCGGCCCCGCT
GGCGATCCCGCAGTTGCACAATCATTTGATCAAGAAGCCGCTGCAGTTCTCATGTCCAGGATAGCTGTCTTCAAG
TCAGAAGTCGACGATGGTCCTGACGTGCTGAGATGGGTGGACAGAATGCTTATTCGCCTTTGTTCGAGGTTTGCC
GATTACAGAAAAGATGACTCGAGTTCGTTCCGACTGGAAAGAAATTTTACTCTATACCCGCAGTTCATGTTCCAT
CTCCGGAGAAGCCAGTTTCTGCAGGTATTCAACAACTCGCCGGACGAGACAGCCTTTTATCGTCATGTTCTCAAT
CATGAGGATGTCAGCAACTCGTTGATCATGATACAGCCGACTCTCGACTCCTATACCTTTGATCAAGATGGCGGA
GTTCCTGTCCTGCTTGACTCTGCATCGATTCAGCCTACTCACATATTACTTCTCGACACTTTCTTCCACATTCTC
ATATTCCACGGTGAGACTATTGCTGAGTGGCGCAAGGCTGGGTACCAGGACCAAGAGGGATATGAAAACTTTGCT
ACGCTACTCGAGCAGCCTAAGGAGGACGCAAGAGACTTGATCACAGACCGATTTCCGGGCTACGTCGGCACAAAC
TATCTTCACTGA
Transcript >Ophun1|5529
ATGCGGCCTGGGATGCAGTCTCAACCGGGACGCCAGGCTGCCGGGGGCCCAGCGTCCCGCTTCCTACTTCCCGTG
CAACAAGCCGAATTTCAGCTTACGAAGGCCCTCGAGAGTCTTCAGAAAGATCCCTGGCCGACGGCAAACGACCGC
CGAAGCCTTCGATGCACTGGCGTGGCCCTGAGCGTCGCCATAGGCTTAATGGAGTCTTCCTTCCAAAACTCTGGA
GGTCGCATTATGCTCTTTGCAGGTGGCCCAGCTACCGAGGGGCCAGGCATGGTCGTGGGTGCAGAACTCCGCGAA
CCTATTCGATCCCACCATGACATAGACCGGGATAACGTCAAGTATTACAAGAAAGCTTTGAAGTTCTATGAAAAC
CTGGCGAAACGCACTGCCCATAACGGTCACATCATTGATATCTTTGCTGGATCCTTGGACCAGGTCGGACTTCTG
GAAATGAAAGGCCTCTGCAACTCCACTGGCGGCCACATGATATTGACAGACAGCTTCACCTCCTCCATGTTCAAG
CAGTCATTTATCCGGGTATTCGAAAAGGACGGCGACGATAATCTACTCATGGGATTCAATGCCACGTTGGAGGTC
TTGACCACCAAAGAACTCAAGGTGACAGGCCTCATTGGACACGCCGTCTCTCTGAACAAAAAGTCGATCTCCGTC
GGAGAAACAGAATGCGGGATTGGAAATACGTGTTCTTGGAAGATGTGTGGGATCGATCCCAAGTCCAGCTACGGC
ATCTATTTCGAAGTTGCTGGTCCAGGTCAACCAACGCATCAGCAATCGCCCCAGAAAGGCATAATGCAGTTTCTC
ACATACTATCAACATGCTTCGGGCCAATTCCACCTTCGAGTCACAACAATATCTCGGACCTTGAGCGGCCCCGCT
GGCGATCCCGCAGTTGCACAATCATTTGATCAAGAAGCCGCTGCAGTTCTCATGTCCAGGATAGCTGTCTTCAAG
TCAGAAGTCGACGATGGTCCTGACGTGCTGAGATGGGTGGACAGAATGCTTATTCGCCTTTGTTCGAGGTTTGCC
GATTACAGAAAAGATGACTCGAGTTCGTTCCGACTGGAAAGAAATTTTACTCTATACCCGCAGTTCATGTTCCAT
CTCCGGAGAAGCCAGTTTCTGCAGGTATTCAACAACTCGCCGGACGAGACAGCCTTTTATCGTCATGTTCTCAAT
CATGAGGATGTCAGCAACTCGTTGATCATGATACAGCCGACTCTCGACTCCTATACCTTTGATCAAGATGGCGGA
GTTCCTGTCCTGCTTGACTCTGCATCGATTCAGCCTACTCACATATTACTTCTCGACACTTTCTTCCACATTCTC
ATATTCCACGGTGAGACTATTGCTGAGTGGCGCAAGGCTGGGTACCAGGACCAAGAGGGATATGAAAACTTTGCT
ACGCTACTCGAGCAGCCTAAGGAGGACGCAAGAGACTTGATCACAGACCGATTTCCGGGCTACGTCGGCACAAAC
TATCTTCACTGA
Gene >Ophun1|5529
ATGCGGCCTGGGATGCAGTCTCAACCGGGACGCCAGGCTGCCGGGGGCCCAGCGTCCCGCTTCCTACTTCCCGTG
CAACAAGCCGAATTTCAGCTTACGAAGGCCCTCGAGAGTCTTCAGAAAGATCCCTGGCCGACGGCAAACGACCGC
CGAAGCCTTCGATGCACTGGCGTGGCCCTGAGCGTCGCCATAGGCTTAATGGAGTCTTCCTTCCAAAACTCTGGA
GGTCGCATTATGCTCTTTGCAGGTGGCCCAGCTACCGAGGGGCCAGGCATGGTCGTGGGTGCAGAACTCCGCGAA
CCTATTCGATCCCACCATGACATAGACCGGGATAACGTCAAGTATTACAAGAAAGCTTTGAAGGTATGTAAGACT
CCTTCATGATAATGACGAGAGCACTAAGCGTGTGTTTAGTTCTATGAAAACCTGGCGAAACGCACTGCCCATAAC
GGTCACATCATTGATATCTTTGCTGGATCCTTGGACCAGGTCGGACTTCTGGAAATGAAAGGCCTCTGCAACTCC
ACTGGCGGCCACATGATATTGACAGACAGCTTCACCTCCTCCATGTTCAAGCAGTCATTTATCCGGGTATTCGAA
AAGGACGGCGACGATAATCTACTCATGGGATTCAATGCCACGTTGGAGGTCTTGACCACCAAAGAACTCAAGGTG
ACAGGCCTCATTGGACACGCCGTCTCTCTGAACAAAAAGTCGATCTCCGTCGGAGAAACAGAATGCGGGATTGGA
AATACGTGTTCTTGGAAGATGTGTGGGATCGATCCCAAGTCCAGCTACGGCATCTATTTCGAAGTTGCTGGTCCA
GGTCAACCAACGCATCAGCAATCGCCCCAGAAAGGCATAATGCAGTTTCTCACATACTATCAACATGCTTCGGGC
CAATTCCACCTTCGAGTCACAACAATATCTCGGACCTTGAGCGGCCCCGCTGGCGATCCCGCAGTTGCACAATCA
TTTGATCAAGAAGCCGCTGCAGTTCTCATGTCCAGGATAGCTGTCTTCAAGTCAGAAGTCGACGATGGTCCTGAC
GTGCTGAGATGGGTGGACAGAATGCTTATTCGCCTTTGTTCGAGGTTTGCCGATTACAGAAAAGATGACTCGAGT
TCGTTCCGACTGGAAAGAAATTTTACTCTATACCCGCAGTTCATGTTCCATCTCCGGAGAAGCCAGTTTCTGCAG
GTATTCAACAACTCGCCGGACGAGACAGCCTTTTATCGTCATGTTCTCAATCATGAGGATGTCAGCAACTCGTTG
ATCATGATACAGCCGACTCTCGACTCCTATACCTTTGATCAAGATGGCGGAGTTCCTGTCCTGCTTGACTCTGCA
TCGATTCAGCCTACTCACATATTACTTCTCGACACTTTCTTCCACATTCTCATATTCCACGGTGAGACTATTGCT
GAGTGGCGCAAGGCTGGGTACCAGGACCAAGAGGGATATGAAAACTTTGCTACGCTACTCGAGCAGCCTAAGGAG
GACGCAAGAGTATGTGAATATATAGATCGATGGCGTTGAGAAGTCGACTAATATCGATACAGGACTTGATCACAG
ACCGATTTCCGTTACCCCGCTTCATTGTGTGTGATGCCGGAGGGTCCCAAGCTCGATTTCTTCTCTCCAAACTCA
ATCCATCCACGACGCACACATCTGGCCCGTTTGGCGGAGCAGGGGCTACGTCGGCACAAACTATCTTCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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