Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5527
Gene name
LocationContig_55:47655..48278
Strand-
Gene length (bp)623
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03650 MPC Mitochondrial pyruvate carriers 8.7E-49 44 150

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 44 140 3.0E-35
sp|Q09896|MPC2_SCHPO Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 44 148 4.0E-35
sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 44 140 1.0E-32
sp|O01578|MPC2_CAEEL Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 45 148 2.0E-29
sp|O49636|MPC4_ARATH Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 44 129 6.0E-26
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Swissprot ID Swissprot Description Start End E-value
sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 44 140 3.0E-35
sp|Q09896|MPC2_SCHPO Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 44 148 4.0E-35
sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 44 140 1.0E-32
sp|O01578|MPC2_CAEEL Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 45 148 2.0E-29
sp|O49636|MPC4_ARATH Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 44 129 6.0E-26
sp|O95563|MPC2_HUMAN Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1 47 134 4.0E-25
sp|P38718|MPC2_RAT Mitochondrial pyruvate carrier 2 OS=Rattus norvegicus GN=Mpc2 PE=2 SV=1 53 143 9.0E-25
sp|Q9D023|MPC2_MOUSE Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1 53 143 1.0E-24
sp|Q5R4Z3|MPC2_PONAB Mitochondrial pyruvate carrier 2 OS=Pongo abelii GN=MPC2 PE=2 SV=1 47 130 2.0E-23
sp|Q8LD38|MPC3_ARATH Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1 44 129 7.0E-23
sp|Q8L7H8|MPC2_ARATH Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1 44 129 2.0E-22
sp|Q949R9|MPC1_ARATH Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1 44 129 2.0E-11
sp|P63031|MPC1_RAT Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1 56 140 1.0E-09
sp|P63030|MPC1_MOUSE Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1 56 140 1.0E-09
sp|Q3ZCG2|MPC1_BOVIN Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1 56 140 5.0E-09
sp|Q9Y5U8|MPC1_HUMAN Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1 56 130 1.0E-08
sp|P53157|MPC1_YEAST Mitochondrial pyruvate carrier 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC1 PE=1 SV=1 56 152 1.0E-07
sp|Q21828|MPC1_CAEEL Probable mitochondrial pyruvate carrier 1 OS=Caenorhabditis elegans GN=R07E5.13 PE=3 SV=2 54 117 2.0E-06
sp|Q7KSC4|MPC1_DROME Mitochondrial pyruvate carrier 1 OS=Drosophila melanogaster GN=Mpc1 PE=3 SV=1 54 134 9.0E-06
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GO

GO Term Description Terminal node
GO:0005743 mitochondrial inner membrane Yes
GO:0006850 mitochondrial pyruvate transmembrane transport Yes
GO:0006848 pyruvate transport No
GO:0006820 anion transport No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0034220 ion transmembrane transport No
GO:0015849 organic acid transport No
GO:0051234 establishment of localization No
GO:0006811 ion transport No
GO:1905039 carboxylic acid transmembrane transport No
GO:0019866 organelle inner membrane No
GO:0031966 mitochondrial membrane No
GO:0051179 localization No
GO:0016020 membrane No
GO:0015718 monocarboxylic acid transport No
GO:1903825 organic acid transmembrane transport No
GO:0110165 cellular anatomical entity No
GO:0055085 transmembrane transport No
GO:0015711 organic anion transport No
GO:1990542 mitochondrial transmembrane transport No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0098656 anion transmembrane transport No
GO:1901475 pyruvate transmembrane transport No
GO:0031090 organelle membrane No
GO:0071702 organic substance transport No
GO:0046942 carboxylic acid transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 110 132 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5527
MLPAASLSRASRPLFRHPPRFRPNPRSGSRRWQSSAAHAQQGWFKRMWESEVGFKTVHFWAPVMKWALVLAGISD
FARPAEKLSMPQNFALTCTGLIWTRWCLIIKPKNYLLAAVNFFLGIVGVIQLTRIGIYKSSQNDSPVEKVKKTVE
EKIDS*
Coding >Ophun1|5527
ATGCTCCCCGCAGCCTCCCTCTCCCGCGCCTCGCGCCCGCTATTCCGCCACCCGCCGCGCTTCCGCCCCAACCCC
CGCTCCGGCTCGCGAAGATGGCAGAGCAGCGCCGCCCACGCTCAACAAGGCTGGTTTAAGCGCATGTGGGAGAGC
GAGGTTGGCTTCAAGACGGTTCACTTCTGGGCCCCCGTCATGAAGTGGGCCCTCGTCCTCGCCGGCATCTCCGAC
TTCGCCCGCCCAGCCGAGAAGCTGTCGATGCCGCAGAACTTTGCCCTCACCTGCACGGGCCTCATCTGGACGCGA
TGGTGTCTCATCATCAAGCCCAAGAACTACCTGCTCGCGGCCGTCAACTTCTTCCTCGGCATCGTTGGCGTCATC
CAGCTGACTCGCATTGGCATCTACAAGTCGTCGCAAAACGACAGCCCTGTAGAAAAGGTCAAGAAGACTGTCGAG
GAAAAGATCGACTCATAG
Transcript >Ophun1|5527
ATGCTCCCCGCAGCCTCCCTCTCCCGCGCCTCGCGCCCGCTATTCCGCCACCCGCCGCGCTTCCGCCCCAACCCC
CGCTCCGGCTCGCGAAGATGGCAGAGCAGCGCCGCCCACGCTCAACAAGGCTGGTTTAAGCGCATGTGGGAGAGC
GAGGTTGGCTTCAAGACGGTTCACTTCTGGGCCCCCGTCATGAAGTGGGCCCTCGTCCTCGCCGGCATCTCCGAC
TTCGCCCGCCCAGCCGAGAAGCTGTCGATGCCGCAGAACTTTGCCCTCACCTGCACGGGCCTCATCTGGACGCGA
TGGTGTCTCATCATCAAGCCCAAGAACTACCTGCTCGCGGCCGTCAACTTCTTCCTCGGCATCGTTGGCGTCATC
CAGCTGACTCGCATTGGCATCTACAAGTCGTCGCAAAACGACAGCCCTGTAGAAAAGGTCAAGAAGACTGTCGAG
GAAAAGATCGACTCATAG
Gene >Ophun1|5527
ATGCTCCCCGCAGCCTCCCTCTCCCGCGCCTCGCGCCCGCTATTCCGCCACCCGCCGCGCTTCCGCCCCAACCCC
CGCTCCGGCTCGCGAAGATGGCAGAGCAGCGCCGCCCACGCTCAACAAGGCTGGTTTAAGCGCATGTGGGAGAGC
GAGGTTGGCTTCAAGACGGTTCACTTCTGGTGCGCGAGACCCTTCCCTCTCTCCCTCTGAAACCAAATAACTCAC
CTGAATCCAGGGCCCCCGTCATGAAGGTCCGTCTGCGCCTCCTCCAGCTCACCCATCACCTGCTAACCCCAGCAG
TGGGCCCTCGTCCTCGCCGGCATCTCCGACTTCGCCCGCCCAGCCGAGAAGCTGTCGATGCCGCAGAACTTTGCC
CTCACCTGCACGGGCCTCATCTGGACGCGATGGTGTCTCATCATCAAGCCCAAGAACTACCTGTCCGTCTTGACC
CGGCTTGACTCTATGCTCGGTCGCTGACCCATGACAGGCTCGCGGCCGTCAACTTCTTCCTCGGCATCGTTGGCG
TCATCCAGCTGACTCGCATTGGCATCTACAAGTCGTCGCAAAACGACAGCCCTGTAGAAAAGGTCAAGAAGACTG
TCGAGGAAAAGATCGACTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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