Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5491
Gene name
LocationContig_546:2813..3663
Strand+
Gene length (bp)850
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03169 OPT OPT oligopeptide transporter protein 2.2E-42 77 220

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P53134|YGL4_YEAST Putative oligopeptide transporter YGL114W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL114W PE=1 SV=1 102 221 8.0E-42
sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 71 222 1.0E-11
sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 87 220 2.0E-11
sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 94 220 3.0E-10
sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 85 220 1.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|P53134|YGL4_YEAST Putative oligopeptide transporter YGL114W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL114W PE=1 SV=1 102 221 8.0E-42
sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 71 222 1.0E-11
sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 87 220 2.0E-11
sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 94 220 3.0E-10
sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 85 220 1.0E-09
sp|Q6R3K9|YSL2_ARATH Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=1 SV=1 59 220 2.0E-08
sp|Q6H3Z3|YSL15_ORYSJ Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1 107 220 2.0E-08
sp|Q9AY27|YS1_MAIZE Iron-phytosiderophore transporter yellow stripe 1 OS=Zea mays GN=YS1 PE=2 SV=1 107 220 3.0E-08
sp|Q6H3Z6|YSL2_ORYSJ Metal-nicotianamine transporter YSL2 OS=Oryza sativa subsp. japonica GN=YSL2 PE=2 SV=2 107 220 3.0E-08
sp|Q7XN54|YSL16_ORYSJ Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2 107 220 3.0E-08
sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1 78 220 4.0E-08
sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1 110 220 8.0E-08
sp|Q7XRV1|YSL5_ORYSJ Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3 110 222 3.0E-07
sp|Q7XUJ2|YSL9_ORYSJ Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2 110 222 5.0E-07
sp|Q2EF88|YSL3_ARATH Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1 83 220 8.0E-07
sp|Q6R3K4|YSL8_ARATH Probable metal-nicotianamine transporter YSL8 OS=Arabidopsis thaliana GN=YSL8 PE=1 SV=2 110 220 2.0E-06
sp|Q6AVD0|YSL3_ORYSJ Probable metal-nicotianamine transporter YSL3 OS=Oryza sativa subsp. japonica GN=YSL3 PE=2 SV=2 105 217 4.0E-06
sp|Q6ZGM7|YSL7_ORYSJ Probable metal-nicotianamine transporter YSL7 OS=Oryza sativa subsp. japonica GN=YSL7 PE=2 SV=1 117 220 4.0E-06
sp|Q6R3K8|YSL4_ARATH Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1 110 222 4.0E-06
sp|Q9LUN2|YSL5_ARATH Probable metal-nicotianamine transporter YSL5 OS=Arabidopsis thaliana GN=YSL5 PE=1 SV=1 110 220 5.0E-06
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GO

GO Term Description Terminal node
GO:0035673 oligopeptide transmembrane transporter activity Yes
GO:0022857 transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0042887 amide transmembrane transporter activity No
GO:1904680 peptide transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 79 101 22
2 106 128 22
3 198 220 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5491
MLSDAVVSLGYIALRPVLDRLLTDPYGTATQRLRGLLDVFGRSVAYQPLSTNEQEPCSVSASNSIGPQGPEDAPP
DQRIGARVVGVGLVASIFLCIGTVHAVFGNLVPIYATIVAVLMALVLSIMGVRALGETDLNPVSGISKLAQLLFA
LIIPQSNKSSVLINLVAGAVSEAGALQAGDLMQDLKTGHLLGASPKAQFYGQIIGATFGAILSAVLYGLYTT*
Coding >Ophun1|5491
ATGCTCTCCGACGCCGTTGTCAGCCTTGGCTACATCGCTCTGCGTCCCGTTCTGGATAGGTTACTGACCGATCCT
TACGGGACCGCAACGCAGCGACTCCGTGGGTTATTGGACGTTTTTGGACGCAGCGTCGCCTACCAGCCTCTTTCA
ACCAACGAGCAGGAACCTTGCTCAGTGTCAGCTTCAAACAGTATCGGGCCTCAGGGCCCTGAAGATGCGCCTCCA
GACCAGCGCATTGGTGCACGCGTCGTGGGTGTTGGTCTTGTCGCGTCCATCTTCCTATGTATAGGCACGGTGCAC
GCTGTGTTTGGCAACCTCGTCCCGATCTATGCGACTATCGTCGCTGTCCTGATGGCACTTGTCCTCAGCATCATG
GGCGTCAGGGCTCTTGGTGAGACGGACTTGAATCCTGTTTCTGGAATAAGCAAACTAGCTCAGCTGCTGTTCGCC
CTTATCATTCCACAGTCCAACAAATCAAGCGTTCTTATCAATCTCGTTGCCGGCGCTGTCTCCGAAGCTGGGGCA
TTGCAGGCTGGTGATCTGATGCAGGATCTCAAAACGGGTCACCTCCTTGGAGCTTCACCAAAGGCACAGTTTTAC
GGTCAGATCATTGGCGCCACATTTGGCGCAATTCTCAGCGCAGTCCTGTATGGGCTTTACACAACGTAG
Transcript >Ophun1|5491
ATGCTCTCCGACGCCGTTGTCAGCCTTGGCTACATCGCTCTGCGTCCCGTTCTGGATAGGTTACTGACCGATCCT
TACGGGACCGCAACGCAGCGACTCCGTGGGTTATTGGACGTTTTTGGACGCAGCGTCGCCTACCAGCCTCTTTCA
ACCAACGAGCAGGAACCTTGCTCAGTGTCAGCTTCAAACAGTATCGGGCCTCAGGGCCCTGAAGATGCGCCTCCA
GACCAGCGCATTGGTGCACGCGTCGTGGGTGTTGGTCTTGTCGCGTCCATCTTCCTATGTATAGGCACGGTGCAC
GCTGTGTTTGGCAACCTCGTCCCGATCTATGCGACTATCGTCGCTGTCCTGATGGCACTTGTCCTCAGCATCATG
GGCGTCAGGGCTCTTGGTGAGACGGACTTGAATCCTGTTTCTGGAATAAGCAAACTAGCTCAGCTGCTGTTCGCC
CTTATCATTCCACAGTCCAACAAATCAAGCGTTCTTATCAATCTCGTTGCCGGCGCTGTCTCCGAAGCTGGGGCA
TTGCAGGCTGGTGATCTGATGCAGGATCTCAAAACGGGTCACCTCCTTGGAGCTTCACCAAAGGCACAGTTTTAC
GGTCAGATCATTGGCGCCACATTTGGCGCAATTCTCAGCGCAGTCCTGTATGGGCTTTACACAACGTAG
Gene >Ophun1|5491
ATGCTCTCCGACGCCGTTGTCAGCCTTGGCTACATCGCTCTGCGTCCCGTTCTGGATAGGTTACTGACCGATCCT
TACGGGACCGCAACGCAGCGACTCCGTGGGTTATTGGACGTTTTTGGACGCAGCGTCGCCTACCAGCCTCTTTCA
ACCAACGAGCAGGAACCTTGCTCAGTGTCAGCTTCAAACAGTATCGGGCCTCAGGGCCCTGAAGATGCGCCTCCA
GACCAGCGCATTGGTGCACGCGTCGTGGGTGTTGGTCTTGTCGCGTCCATCTTCCTATGTATAGGCACGGTGCAC
GCTGTGTTTGGCAACCTCGTCCCGATCTATGCGACTATCGTCGCTGTCCTGATGGCACTTGTCCTCAGCATCATG
GGCGTCAGGGCTCTTGGTGAGACGGACTTGAATCCTGTTTCTGGAATAAGCAAACTAGCTCAGCTGCTGTTCGCC
CTTATCATTCCACAGTCCAACAAATCAAGCGTTCTTATCAATCTCGTTGCCGGCGCTGTCGTACGTATTCTCTCC
GCCGCGAAGGCCCTTGCTCTCTAGTTCAATATCGCCCCTGGCATGTTGAGAGTGGCATTTGCCCGTCGTCTACTC
CGTAAGAAGAGCGCCGCTGACAAGGCCTCCTGCAGTCCGAAGCTGTGAGCCATATCGAAGGACGAATGAGATGAG
TACTGATGCTGACATTGGGGTCTAGGGGGCATTGCAGGCTGGTGATCTGATGCAGGATCTCAAAACGGGTCACCT
CCTTGGAGCTTCACCAAAGGCACAGTTTTACGGTCAGATCATTGGCGCCACATTTGGCGCAATTCTCAGCGCAGT
CCTGTATGGGCTTTACACAACGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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