© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5465 |
| Gene name | |
| Location | Contig_540:572..2241 |
| Strand | - |
| Gene length (bp) | 1669 |
| Transcript length (bp) | 1617 |
| Coding sequence length (bp) | 1617 |
| Protein length (aa) | 539 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13899 | Thioredoxin_7 | Thioredoxin-like | 4.9E-14 | 231 | 317 |
| PF14555 | UBA_4 | UBA-like domain | 2.1E-11 | 2 | 42 |
| PF00789 | UBX | UBX domain | 1.1E-05 | 458 | 534 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14048|UBX2_SCHPO | UBX domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1 | 211 | 535 | 1.0E-47 |
| sp|Q06682|UBX5_YEAST | UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1 | 210 | 534 | 4.0E-45 |
| sp|Q6P5G6|UBXN7_MOUSE | UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2 | 142 | 388 | 5.0E-32 |
| sp|Q5REY7|UBXN7_PONAB | UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2 | 142 | 388 | 3.0E-31 |
| sp|O94888|UBXN7_HUMAN | UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2 | 142 | 388 | 3.0E-31 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14048|UBX2_SCHPO | UBX domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1 | 211 | 535 | 1.0E-47 |
| sp|Q06682|UBX5_YEAST | UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1 | 210 | 534 | 4.0E-45 |
| sp|Q6P5G6|UBXN7_MOUSE | UBX domain-containing protein 7 OS=Mus musculus GN=Ubxn7 PE=1 SV=2 | 142 | 388 | 5.0E-32 |
| sp|Q5REY7|UBXN7_PONAB | UBX domain-containing protein 7 OS=Pongo abelii GN=UBXN7 PE=2 SV=2 | 142 | 388 | 3.0E-31 |
| sp|O94888|UBXN7_HUMAN | UBX domain-containing protein 7 OS=Homo sapiens GN=UBXN7 PE=1 SV=2 | 142 | 388 | 3.0E-31 |
| sp|Q55BU7|UBXN7_DICDI | UBX domain-containing protein 7 homolog OS=Dictyostelium discoideum GN=ubxd7 PE=3 SV=1 | 213 | 402 | 3.0E-24 |
| sp|Q94JZ8|PUX7_ARATH | Plant UBX domain-containing protein 7 OS=Arabidopsis thaliana GN=PUX7 PE=1 SV=1 | 131 | 388 | 3.0E-21 |
| sp|P0DKI4|PUX14_ARATH | Putative plant UBX domain-containing protein 14 OS=Arabidopsis thaliana GN=PUX14 PE=5 SV=1 | 197 | 535 | 2.0E-17 |
| sp|P0DKI5|PUX16_ARATH | Plant UBX domain-containing protein 16 OS=Arabidopsis thaliana GN=PUX16 PE=2 SV=1 | 219 | 535 | 3.0E-10 |
| sp|Q94HV8|PUX15_ARATH | Putative plant UBX domain-containing protein 15 OS=Arabidopsis thaliana GN=PUX15 PE=5 SV=2 | 231 | 361 | 1.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5465 MDETISTFVSITGASADVARGFVQLAGGDFERAVGLYFENPDLVSGVGADVSANDPPPLPTSERPSLGRQDSAGV IHISDDEADQDLMHLDEGDDEDDGGLAAAAGSSRAAALLQEEEDAAMAKRLQEELYGGGQGSGAGDEDGVRAPIA RTTETLIAPDPAWGGGPEDDLNVAFLEEMRRRRPLPPRSGGPFGQGIWGDGGSSSAENGSHARRLEDLFRPPYDL MTRAPWDEARTLGKSLKKWLLVNLQDMNDFNCQALNRDIWKDQAVQDLVEENFIFMQYDKDYPDAEEYVTFYLPH RSYENPDMFPHVSIVDPRTGEQVKVWSGRPFPSASEFHAELAEFLDRYSLAANSKNPVAKATTRRRQPVDVDRMT EDEMLEMALKNSLAGAGEGGDEAGTGSATSNNLDDPDALTKSPGPSGTEASEDKGKGIETTETCPFDLISDSQPH TEPEADAATTTRIQFKHPDGRVIRRFRLQDPVRRIYEWLKAEPLADKQGVKFELKRMPQGQDLLECLEGTVEETG LKQGTVMVEFVED* |
| Coding | >Ophun1|5465 ATGGACGAGACCATCTCCACCTTCGTCTCCATCACGGGGGCGAGCGCAGACGTGGCACGGGGCTTCGTGCAGCTG GCGGGCGGCGACTTTGAGCGCGCAGTCGGCCTGTATTTCGAGAACCCTGATCTCGTGTCCGGCGTGGGAGCCGAT GTCTCGGCCAACGATCCGCCTCCGCTGCCGACTTCTGAGAGGCCCAGTCTCGGCCGGCAAGACTCTGCCGGCGTG ATCCACATCAGCGATGACGAAGCCGATCAAGATCTGATGCACCTGGACGAGGGCGACGACGAAGATGACGGCGGC TTGGCTGCTGCTGCCGGCTCCAGCAGAGCTGCGGCTCTTCTCCAGGAAGAGGAAGATGCGGCCATGGCGAAGCGG TTGCAGGAGGAGCTCTACGGGGGTGGTCAGGGCTCTGGCGCGGGCGATGAAGACGGCGTCAGAGCTCCTATCGCG AGAACTACGGAGACGCTCATTGCGCCCGACCCGGCTTGGGGCGGCGGACCCGAAGATGATCTGAACGTCGCGTTT CTGGAAGAGATGAGAAGGCGTCGGCCACTACCACCTCGAAGCGGCGGACCGTTTGGCCAGGGCATCTGGGGAGAT GGCGGCTCATCGTCGGCGGAAAACGGCAGCCACGCGCGGAGACTGGAGGATCTGTTTCGACCGCCGTACGATCTG ATGACGCGCGCGCCGTGGGACGAGGCTCGGACCCTGGGCAAGAGTCTCAAGAAGTGGCTGCTCGTCAACCTACAG GATATGAACGACTTCAACTGTCAAGCGCTCAACCGCGACATATGGAAGGATCAGGCGGTACAGGACCTGGTGGAG GAGAACTTCATCTTTATGCAGTACGACAAGGACTACCCGGACGCAGAAGAGTACGTCACGTTCTACCTGCCGCAC CGAAGCTACGAGAACCCGGACATGTTCCCGCACGTGTCCATCGTCGACCCGCGGACGGGCGAGCAGGTCAAGGTC TGGAGCGGGCGGCCATTCCCCAGCGCGAGCGAGTTCCACGCGGAGCTAGCCGAGTTCCTGGACCGGTACAGCCTG GCGGCCAACAGCAAGAACCCGGTGGCCAAGGCGACGACGCGGAGACGGCAGCCGGTCGACGTCGACCGGATGACG GAGGACGAGATGCTGGAGATGGCGCTCAAGAACAGCCTGGCGGGCGCCGGCGAAGGAGGCGATGAGGCGGGGACG GGCTCGGCTACCAGTAATAACCTGGACGATCCGGACGCGTTGACCAAGAGTCCTGGCCCGAGCGGAACAGAGGCT TCGGAAGACAAGGGGAAAGGCATCGAAACTACCGAGACTTGTCCCTTTGACCTCATCTCCGACTCGCAGCCTCAC ACGGAACCAGAGGCAGATGCAGCGACGACGACACGGATCCAGTTCAAGCACCCAGACGGCAGGGTAATCCGACGC TTCCGACTACAAGACCCGGTACGACGAATCTACGAGTGGCTCAAGGCCGAGCCACTGGCCGACAAGCAGGGCGTC AAGTTCGAACTGAAGCGGATGCCGCAGGGACAGGACCTGCTGGAATGCCTGGAGGGCACGGTGGAGGAGACGGGG CTGAAGCAGGGGACGGTAATGGTTGAATTTGTGGAGGACTGA |
| Transcript | >Ophun1|5465 ATGGACGAGACCATCTCCACCTTCGTCTCCATCACGGGGGCGAGCGCAGACGTGGCACGGGGCTTCGTGCAGCTG GCGGGCGGCGACTTTGAGCGCGCAGTCGGCCTGTATTTCGAGAACCCTGATCTCGTGTCCGGCGTGGGAGCCGAT GTCTCGGCCAACGATCCGCCTCCGCTGCCGACTTCTGAGAGGCCCAGTCTCGGCCGGCAAGACTCTGCCGGCGTG ATCCACATCAGCGATGACGAAGCCGATCAAGATCTGATGCACCTGGACGAGGGCGACGACGAAGATGACGGCGGC TTGGCTGCTGCTGCCGGCTCCAGCAGAGCTGCGGCTCTTCTCCAGGAAGAGGAAGATGCGGCCATGGCGAAGCGG TTGCAGGAGGAGCTCTACGGGGGTGGTCAGGGCTCTGGCGCGGGCGATGAAGACGGCGTCAGAGCTCCTATCGCG AGAACTACGGAGACGCTCATTGCGCCCGACCCGGCTTGGGGCGGCGGACCCGAAGATGATCTGAACGTCGCGTTT CTGGAAGAGATGAGAAGGCGTCGGCCACTACCACCTCGAAGCGGCGGACCGTTTGGCCAGGGCATCTGGGGAGAT GGCGGCTCATCGTCGGCGGAAAACGGCAGCCACGCGCGGAGACTGGAGGATCTGTTTCGACCGCCGTACGATCTG ATGACGCGCGCGCCGTGGGACGAGGCTCGGACCCTGGGCAAGAGTCTCAAGAAGTGGCTGCTCGTCAACCTACAG GATATGAACGACTTCAACTGTCAAGCGCTCAACCGCGACATATGGAAGGATCAGGCGGTACAGGACCTGGTGGAG GAGAACTTCATCTTTATGCAGTACGACAAGGACTACCCGGACGCAGAAGAGTACGTCACGTTCTACCTGCCGCAC CGAAGCTACGAGAACCCGGACATGTTCCCGCACGTGTCCATCGTCGACCCGCGGACGGGCGAGCAGGTCAAGGTC TGGAGCGGGCGGCCATTCCCCAGCGCGAGCGAGTTCCACGCGGAGCTAGCCGAGTTCCTGGACCGGTACAGCCTG GCGGCCAACAGCAAGAACCCGGTGGCCAAGGCGACGACGCGGAGACGGCAGCCGGTCGACGTCGACCGGATGACG GAGGACGAGATGCTGGAGATGGCGCTCAAGAACAGCCTGGCGGGCGCCGGCGAAGGAGGCGATGAGGCGGGGACG GGCTCGGCTACCAGTAATAACCTGGACGATCCGGACGCGTTGACCAAGAGTCCTGGCCCGAGCGGAACAGAGGCT TCGGAAGACAAGGGGAAAGGCATCGAAACTACCGAGACTTGTCCCTTTGACCTCATCTCCGACTCGCAGCCTCAC ACGGAACCAGAGGCAGATGCAGCGACGACGACACGGATCCAGTTCAAGCACCCAGACGGCAGGGTAATCCGACGC TTCCGACTACAAGACCCGGTACGACGAATCTACGAGTGGCTCAAGGCCGAGCCACTGGCCGACAAGCAGGGCGTC AAGTTCGAACTGAAGCGGATGCCGCAGGGACAGGACCTGCTGGAATGCCTGGAGGGCACGGTGGAGGAGACGGGG CTGAAGCAGGGGACGGTAATGGTTGAATTTGTGGAGGACTGA |
| Gene | >Ophun1|5465 ATGGACGAGACCATCTCCACCTTCGTCTCCATCACGGGGGCGAGCGCAGACGTGGCACGGGGCTTCGTGCAGCTG GCGGGCGGCGACTTTGAGCGCGCAGTCGGCCTGTATTTCGAGAACCCTGATCTCGTGTCCGGCGTGGGAGCCGAT GTCTCGGCCAACGATCCGCCTCCGCTGCCGACTTCTGAGAGGCCCAGTCTCGGCCGGCAAGACTCTGCCGGCGTG ATCCACATCAGCGATGACGAAGCCGATCAAGATCTGATGCACCTGGACGAGGGCGACGACGAAGATGACGGCGGC TTGGCTGCTGCTGCCGGCTCCAGCAGAGCTGCGGCTCTTCTCCAGGAAGAGGAAGATGCGGCCATGGCGAAGCGG TTGCAGGAGGAGCTCTACGGGGGTGGTCAGGGCTCTGGCGCGGGCGATGAAGACGGCGTCAGAGCTCCTATCGCG AGAACTACGGAGACGCTCATTGCGCCCGACCCGGCTTGGGGCGGCGGACCCGAAGATGATCTGAACGTCGCGTTT CTGGAAGAGATGAGAAGGCGTCGGCCACTACCACGTGAGATTTCTTCTATCAACATCATCCACTCCTACTGACAG TACTTGATCAGCTCGAAGCGGCGGACCGTTTGGCCAGGGCATCTGGGGAGATGGCGGCTCATCGTCGGCGGAAAA CGGCAGCCACGCGCGGAGACTGGAGGATCTGTTTCGACCGCCGTACGATCTGATGACGCGCGCGCCGTGGGACGA GGCTCGGACCCTGGGCAAGAGTCTCAAGAAGTGGCTGCTCGTCAACCTACAGGATATGAACGACTTCAACTGTCA AGCGCTCAACCGCGACATATGGAAGGATCAGGCGGTACAGGACCTGGTGGAGGAGAACTTCATCTTTATGCAGTA CGACAAGGACTACCCGGACGCAGAAGAGTACGTCACGTTCTACCTGCCGCACCGAAGCTACGAGAACCCGGACAT GTTCCCGCACGTGTCCATCGTCGACCCGCGGACGGGCGAGCAGGTCAAGGTCTGGAGCGGGCGGCCATTCCCCAG CGCGAGCGAGTTCCACGCGGAGCTAGCCGAGTTCCTGGACCGGTACAGCCTGGCGGCCAACAGCAAGAACCCGGT GGCCAAGGCGACGACGCGGAGACGGCAGCCGGTCGACGTCGACCGGATGACGGAGGACGAGATGCTGGAGATGGC GCTCAAGAACAGCCTGGCGGGCGCCGGCGAAGGAGGCGATGAGGCGGGGACGGGCTCGGCTACCAGTAATAACCT GGACGATCCGGACGCGTTGACCAAGAGTCCTGGCCCGAGCGGAACAGAGGCTTCGGAAGACAAGGGGAAAGGCAT CGAAACTACCGAGACTTGTCCCTTTGACCTCATCTCCGACTCGCAGCCTCACACGGAACCAGAGGCAGATGCAGC GACGACGACACGGATCCAGTTCAAGCACCCAGACGGCAGGGTAATCCGACGCTTCCGACTACAAGACCCGGTACG ACGAATCTACGAGTGGCTCAAGGCCGAGCCACTGGCCGACAAGCAGGGCGTCAAGTTCGAACTGAAGCGGATGCC GCAGGGACAGGACCTGCTGGAATGCCTGGAGGGCACGGTGGAGGAGACGGGGCTGAAGCAGGGGACGGTAATGGT TGAATTTGTGGAGGACTGA |