© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5433 |
| Gene name | |
| Location | Contig_537:11492..12684 |
| Strand | + |
| Gene length (bp) | 1192 |
| Transcript length (bp) | 1065 |
| Coding sequence length (bp) | 1065 |
| Protein length (aa) | 355 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13127 | DUF3955 | Protein of unknown function (DUF3955) | 4.8E-09 | 52 | 106 |
| PF06027 | SLC35F | Solute carrier family 35 | 4.7E-06 | 184 | 312 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 49 | 354 | 2.0E-49 |
| sp|A6QL92|S35F5_BOVIN | Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 3.0E-39 |
| sp|Q5R6J3|S35F5_PONAB | Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 4.0E-38 |
| sp|Q8WV83|S35F5_HUMAN | Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 2.0E-37 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 49 | 336 | 1.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q03730|YMB8_YEAST | Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1 | 49 | 354 | 2.0E-49 |
| sp|A6QL92|S35F5_BOVIN | Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 3.0E-39 |
| sp|Q5R6J3|S35F5_PONAB | Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 4.0E-38 |
| sp|Q8WV83|S35F5_HUMAN | Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1 | 46 | 336 | 2.0E-37 |
| sp|Q8R314|S35F5_MOUSE | Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1 | 49 | 336 | 1.0E-35 |
| sp|O94654|YGF3_SCHPO | Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1 | 49 | 338 | 2.0E-35 |
| sp|Q4R794|S35F5_MACFA | Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1 | 158 | 336 | 4.0E-31 |
| sp|Q04083|THI74_YEAST | Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1 | 63 | 341 | 2.0E-24 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 233 | 255 | 22 |
| 4 | 270 | 292 | 22 |
| 5 | 305 | 327 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5433 MPDRPVSRQLSDADAAAALAPAESLSPVVALVAAKEEAGWLLAGLGLTRRALGICLLLVTVFLWTASNFMASFIF SDHTYNKPFFLVYINSSVFALSVIPHAIRYLLKNGLRGLRRDTLRLWRERRLRTAMPKPTVVSDEEETAGERLLV SDEEAASQASEQSLTGTDKLGGRETAILSFEFSMLWFAANYLASACLGFTSVASVTILTSTSSMWTLVLCALYRV EKFSVRKLVGVSASLVGVALVSTVDLSGSGSENRGSFPYKTPGQIAAGDAMALMSAVVYGLYVTVMKRRVGREDR VDMRLFFGLVGVFNLVLLWPLFPLLHWTGIETFAMPPTGKVWGVIAVSRRLGLV* |
| Coding | >Ophun1|5433 ATGCCGGACCGGCCGGTATCGAGGCAGCTCAGTGACGCCGATGCCGCCGCTGCCCTCGCGCCGGCTGAGAGCCTT TCGCCCGTGGTGGCTTTGGTCGCGGCCAAGGAGGAGGCGGGGTGGTTGCTGGCTGGCTTGGGACTGACCAGACGT GCTCTCGGGATCTGCCTGCTGCTCGTGACAGTCTTTCTTTGGACTGCTTCGAATTTCATGGCTAGTTTCATCTTC TCAGATCATACATACAACAAGCCCTTTTTCCTCGTCTACATCAACTCTTCCGTCTTCGCCCTTTCGGTGATTCCG CACGCGATACGCTACCTCTTGAAAAATGGACTGCGCGGACTGCGGCGCGATACGCTACGACTGTGGCGCGAACGC CGGCTGCGGACCGCCATGCCCAAGCCGACGGTGGTGTCGGACGAAGAGGAGACGGCAGGCGAGCGACTGCTAGTA TCGGACGAGGAGGCAGCCTCGCAAGCATCGGAGCAGTCCCTCACCGGCACCGACAAACTAGGAGGGCGCGAAACG GCCATTCTCAGCTTCGAGTTCTCGATGCTATGGTTCGCAGCCAACTACCTAGCATCAGCCTGCCTCGGCTTCACC AGCGTGGCCAGCGTGACGATCCTGACGTCGACGAGCAGCATGTGGACCCTCGTCCTCTGCGCCCTCTACCGCGTG GAGAAGTTTTCGGTGCGCAAGCTGGTGGGCGTGTCGGCGTCGCTGGTAGGCGTCGCCCTCGTCTCGACGGTGGAC CTCTCGGGCTCGGGCTCGGAGAATCGCGGGTCTTTCCCGTACAAGACGCCCGGTCAGATTGCGGCGGGTGATGCC ATGGCCTTGATGAGCGCCGTTGTCTACGGGCTGTACGTGACGGTGATGAAGCGGCGGGTAGGACGAGAGGATCGG GTGGACATGCGCTTGTTTTTCGGCTTGGTGGGCGTCTTCAACTTGGTGCTGCTGTGGCCGTTGTTTCCGCTGCTT CACTGGACGGGAATCGAGACGTTTGCGATGCCGCCCACGGGCAAAGTATGGGGTGTCATTGCAGTGAGTCGCCGT CTCGGGCTGGTTTGA |
| Transcript | >Ophun1|5433 ATGCCGGACCGGCCGGTATCGAGGCAGCTCAGTGACGCCGATGCCGCCGCTGCCCTCGCGCCGGCTGAGAGCCTT TCGCCCGTGGTGGCTTTGGTCGCGGCCAAGGAGGAGGCGGGGTGGTTGCTGGCTGGCTTGGGACTGACCAGACGT GCTCTCGGGATCTGCCTGCTGCTCGTGACAGTCTTTCTTTGGACTGCTTCGAATTTCATGGCTAGTTTCATCTTC TCAGATCATACATACAACAAGCCCTTTTTCCTCGTCTACATCAACTCTTCCGTCTTCGCCCTTTCGGTGATTCCG CACGCGATACGCTACCTCTTGAAAAATGGACTGCGCGGACTGCGGCGCGATACGCTACGACTGTGGCGCGAACGC CGGCTGCGGACCGCCATGCCCAAGCCGACGGTGGTGTCGGACGAAGAGGAGACGGCAGGCGAGCGACTGCTAGTA TCGGACGAGGAGGCAGCCTCGCAAGCATCGGAGCAGTCCCTCACCGGCACCGACAAACTAGGAGGGCGCGAAACG GCCATTCTCAGCTTCGAGTTCTCGATGCTATGGTTCGCAGCCAACTACCTAGCATCAGCCTGCCTCGGCTTCACC AGCGTGGCCAGCGTGACGATCCTGACGTCGACGAGCAGCATGTGGACCCTCGTCCTCTGCGCCCTCTACCGCGTG GAGAAGTTTTCGGTGCGCAAGCTGGTGGGCGTGTCGGCGTCGCTGGTAGGCGTCGCCCTCGTCTCGACGGTGGAC CTCTCGGGCTCGGGCTCGGAGAATCGCGGGTCTTTCCCGTACAAGACGCCCGGTCAGATTGCGGCGGGTGATGCC ATGGCCTTGATGAGCGCCGTTGTCTACGGGCTGTACGTGACGGTGATGAAGCGGCGGGTAGGACGAGAGGATCGG GTGGACATGCGCTTGTTTTTCGGCTTGGTGGGCGTCTTCAACTTGGTGCTGCTGTGGCCGTTGTTTCCGCTGCTT CACTGGACGGGAATCGAGACGTTTGCGATGCCGCCCACGGGCAAAGTATGGGGTGTCATTGCAGTGAGTCGCCGT CTCGGGCTGGTTTGA |
| Gene | >Ophun1|5433 ATGCCGGACCGGCCGGTATCGAGGCAGCTCAGTGACGCCGATGCCGCCGCTGCCCTCGCGCCGGCTGAGAGCCTT TCGCCCGTGGTGGCTTTGGTCGCGGCCAAGGAGGAGGCGGGGTGGTTGCTGGCTGGCTTGGGACTGACCAGACGT GCTCTCGGGATCTGCCTGCTGCTCGTGACAGTCTTTCTTTGGACTGCTTCGAATTTCATGGCTAGTGTACGTGGT GGCGGTCATGTCTTTCCTTCTCCTTGATTCTAACTGATGCGGATACCGACGCAGTTCATCTTCTCAGATCATACA TACAACAAGCCCTTTTTCCTCGTCTACATCAACTCTTCCGTCTTCGCCCTTTCGGTGATTCCGCACGCGATACGC TACCTCTTGAAAAATGGACTGCGCGGACTGCGGCGCGATACGCTACGACTGTGGCGCGAACGCCGGCTGCGGACC GCCATGCCCAAGCCGACGGTGGTGTCGGACGAAGAGGAGACGGCAGGCGAGCGACTGCTAGTATCGGACGAGGAG GCAGCCTCGCAAGCATCGGAGCAGTCCCTCACCGGCACCGACAAACTAGGAGGGCGCGAAACGGCCATTCTCAGC TTCGAGTTCTCGATGCTATGGTTCGCAGCCAACTACCTAGCATCAGCCTGCCTCGGCTTCACCAGCGTGGCCAGC GTGACGATCCTGACGTCGACGAGCAGCATGTGGACCCTCGTCCTCTGCGCCCTCTACCGCGTGGAGAAGTTTTCG GTGCGCAAGCTGGTGGGCGTGTCGGCGTCGCTGGTAGGCGTCGCCCTCGTCTCGACGGTGGACCTCTCGGGCTCG GGCTCGGAGAATCGCGGGTCTTTCCCGTACAAGACGCCCGGTCAGATTGCGGCGGGTGATGCCATGGCCTTGATG AGCGCCGTTGTCTACGGGCTGTACGTGACGGTGATGAAGCGGCGGGTAGGACGAGAGGATCGGGTGGACATGCGC TTGTTTTTCGGCTTGGTGGGCGTCTTCAACTTGGTGCTGCTGTGGCCGTTGTTTCCGCTGCTTCACTGGACGGGA ATCGAGACGGTGAGTTGTGGCGGATGCGTGAAGGAGAGGAGGTGAAAGGGCTGACTTGGGATTTCTGTGTCAGTT TGCGATGCCGCCCACGGGCAAAGTATGGGGTGTCATTGCAGTGAGTCGCCGTCTCGGGCTGGTTTGA |