Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5332
Gene name
LocationContig_52:34107..34626
Strand-
Gene length (bp)519
Transcript length (bp)411
Coding sequence length (bp)411
Protein length (aa) 137

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04828 GFA Glutathione-dependent formaldehyde-activating enzyme 2.3E-23 28 117

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016846 carbon-sulfur lyase activity Yes
GO:0003674 molecular_function No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup446
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3428
Ophiocordyceps australis map64 (Brazil) OphauB2|7120
Ophiocordyceps camponoti-floridani Ophcf2|02991
Ophiocordyceps camponoti-floridani Ophcf2|05475
Ophiocordyceps camponoti-rufipedis Ophun1|3452
Ophiocordyceps camponoti-rufipedis Ophun1|5332 (this protein)
Ophiocordyceps kimflemingae Ophio5|2435
Ophiocordyceps kimflemingae Ophio5|7341
Ophiocordyceps subramaniannii Hirsu2|7957

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5332
MPLTGHCLCKAVTYTVDVDEPIMTGYDHCDDCQRQSGSTYSLVSVVPRDKLTIKGNVKRWAGKGSSGKAVYRVFC
PECGSPIAHEPDANMAISALKSGTLDSEIKKKLKPSVEIWTAGKLPFCQEKLEKAFKHMPE*
Coding >Ophun1|5332
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACACGGTCGATGTCGATGAGCCTATCATGACGGGC
TACGACCACTGCGACGACTGTCAACGCCAGAGCGGCTCGACATACTCGCTGGTATCGGTCGTGCCGCGGGACAAG
TTGACCATCAAGGGCAACGTCAAGAGATGGGCAGGAAAGGGCTCCTCCGGCAAGGCCGTCTACCGCGTCTTCTGC
CCCGAGTGCGGCTCGCCCATTGCGCACGAGCCGGATGCCAATATGGCGATTAGCGCGCTCAAGTCTGGGACGCTC
GACAGCGAGATCAAGAAGAAGCTGAAGCCGAGTGTTGAGATTTGGACTGCTGGGAAGTTGCCGTTCTGCCAAGAG
AAGCTGGAGAAGGCGTTTAAGCATATGCCCGAGTAG
Transcript >Ophun1|5332
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACACGGTCGATGTCGATGAGCCTATCATGACGGGC
TACGACCACTGCGACGACTGTCAACGCCAGAGCGGCTCGACATACTCGCTGGTATCGGTCGTGCCGCGGGACAAG
TTGACCATCAAGGGCAACGTCAAGAGATGGGCAGGAAAGGGCTCCTCCGGCAAGGCCGTCTACCGCGTCTTCTGC
CCCGAGTGCGGCTCGCCCATTGCGCACGAGCCGGATGCCAATATGGCGATTAGCGCGCTCAAGTCTGGGACGCTC
GACAGCGAGATCAAGAAGAAGCTGAAGCCGAGTGTTGAGATTTGGACTGCTGGGAAGTTGCCGTTCTGCCAAGAG
AAGCTGGAGAAGGCGTTTAAGCATATGCCCGAGTAG
Gene >Ophun1|5332
ATGCCTCTCACCGGACACTGCCTCTGCAAGGCCGTCACCTACACGGTCGATGTCGATGAGCCTATCATGACGGGC
TACGACCACTGCGACGACTGTCAACGCCAGAGCGGCTCGACATACTGTGCGTTCCCTGACGTCTCCCTTCAATGT
TCAAGTCCTAACGAGTCGTCTCTAGCGCTGGTATCGGTCGTGCCGCGGGACAAGTTGACCATCAAGGGCAACGTC
AAGAGATGGGCAGGAAAGGGCTCCTCCGGCAAGGCCGTCTACCGCGTCTTCTGCCCCGAGTGCGGCTCGCCCATT
GCGCACGAGCCGGATGCCAATATGGCGATTAGCGCGCTCAAGTCTGGGACGCTCGACAGCGAGATCAAGAAGAAG
CTGAAGCCGGTATGTTGTCTCGATGGAGTAGGGTGAGATGATTGCTGATGGTGGTTGTATTAGAGTGTTGAGATT
TGGACTGCTGGGAAGTTGCCGTTCTGCCAAGAGAAGCTGGAGAAGGCGTTTAAGCATATGCCCGAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail