Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5308
Gene name
LocationContig_518:244..1420
Strand-
Gene length (bp)1176
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.1E-16 10 120

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9CA40|NUDT1_ARATH Nudix hydrolase 1 OS=Arabidopsis thaliana GN=NUDT1 PE=1 SV=1 7 133 4.0E-18
sp|Q8BG93|NUD15_MOUSE Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Mus musculus GN=Nudt15 PE=1 SV=1 22 133 2.0E-13
sp|Q9NV35|NUD15_HUMAN Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Homo sapiens GN=NUDT15 PE=1 SV=1 22 114 4.0E-13
sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain DSM 12444 / F199) GN=rppH PE=3 SV=1 3 136 7.0E-08
sp|A7MR28|RPPH_CROS8 RNA pyrophosphohydrolase OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=rppH PE=3 SV=1 10 133 7.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q9CA40|NUDT1_ARATH Nudix hydrolase 1 OS=Arabidopsis thaliana GN=NUDT1 PE=1 SV=1 7 133 4.0E-18
sp|Q8BG93|NUD15_MOUSE Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Mus musculus GN=Nudt15 PE=1 SV=1 22 133 2.0E-13
sp|Q9NV35|NUD15_HUMAN Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Homo sapiens GN=NUDT15 PE=1 SV=1 22 114 4.0E-13
sp|Q2G7H8|RPPH_NOVAD RNA pyrophosphohydrolase OS=Novosphingobium aromaticivorans (strain DSM 12444 / F199) GN=rppH PE=3 SV=1 3 136 7.0E-08
sp|A7MR28|RPPH_CROS8 RNA pyrophosphohydrolase OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=rppH PE=3 SV=1 10 133 7.0E-08
sp|A9MS78|RPPH_SALAR RNA pyrophosphohydrolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B2VFV0|RPPH_ERWT9 RNA pyrophosphohydrolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B5F4U8|RPPH_SALA4 RNA pyrophosphohydrolase OS=Salmonella agona (strain SL483) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|Q57KB3|RPPH_SALCH RNA pyrophosphohydrolase OS=Salmonella choleraesuis (strain SC-B67) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B5FUB2|RPPH_SALDC RNA pyrophosphohydrolase OS=Salmonella dublin (strain CT_02021853) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B5QWT6|RPPH_SALEP RNA pyrophosphohydrolase OS=Salmonella enteritidis PT4 (strain P125109) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B5RDY0|RPPH_SALG2 RNA pyrophosphohydrolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B4TGQ9|RPPH_SALHS RNA pyrophosphohydrolase OS=Salmonella heidelberg (strain SL476) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|Q5PEN3|RPPH_SALPA RNA pyrophosphohydrolase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|P65554|RPPH_SALTY RNA pyrophosphohydrolase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|P65555|RPPH_SALTI RNA pyrophosphohydrolase OS=Salmonella typhi GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B4TUM2|RPPH_SALSV RNA pyrophosphohydrolase OS=Salmonella schwarzengrund (strain CVM19633) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|C0PXJ2|RPPH_SALPC RNA pyrophosphohydrolase OS=Salmonella paratyphi C (strain RKS4594) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B5BFH0|RPPH_SALPK RNA pyrophosphohydrolase OS=Salmonella paratyphi A (strain AKU_12601) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|A9N2M1|RPPH_SALPB RNA pyrophosphohydrolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B4T4Z7|RPPH_SALNS RNA pyrophosphohydrolase OS=Salmonella newport (strain SL254) GN=rppH PE=3 SV=1 10 133 1.0E-06
sp|B7LNI5|RPPH_ESCF3 RNA pyrophosphohydrolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rppH PE=3 SV=1 10 133 2.0E-06
sp|A6TDG6|RPPH_KLEP7 RNA pyrophosphohydrolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rppH PE=3 SV=1 10 133 3.0E-06
sp|B5XUP9|RPPH_KLEP3 RNA pyrophosphohydrolase OS=Klebsiella pneumoniae (strain 342) GN=rppH PE=3 SV=1 10 133 3.0E-06
sp|Q31XF7|RPPH_SHIBS RNA pyrophosphohydrolase OS=Shigella boydii serotype 4 (strain Sb227) GN=rppH PE=3 SV=1 10 133 3.0E-06
sp|Q0TE02|RPPH_ECOL5 RNA pyrophosphohydrolase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|A8A3W3|RPPH_ECOHS RNA pyrophosphohydrolase OS=Escherichia coli O9:H4 (strain HS) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B1XDN6|RPPH_ECODH RNA pyrophosphohydrolase OS=Escherichia coli (strain K12 / DH10B) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|C4ZZY2|RPPH_ECOBW RNA pyrophosphohydrolase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7LY86|RPPH_ECO8A RNA pyrophosphohydrolase OS=Escherichia coli O8 (strain IAI1) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7MYY4|RPPH_ECO81 RNA pyrophosphohydrolase OS=Escherichia coli O81 (strain ED1a) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7NVX5|RPPH_ECO7I RNA pyrophosphohydrolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B5Z4E7|RPPH_ECO5E RNA pyrophosphohydrolase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|P0A778|RPPH_ECO57 RNA pyrophosphohydrolase OS=Escherichia coli O157:H7 GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7LF07|RPPH_ECO55 RNA pyrophosphohydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7MLH6|RPPH_ECO45 RNA pyrophosphohydrolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B7UHP7|RPPH_ECO27 RNA pyrophosphohydrolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|A7ZQT6|RPPH_ECO24 RNA pyrophosphohydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|P0A777|RPPH_ECOL6 RNA pyrophosphohydrolase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B1IU14|RPPH_ECOLC RNA pyrophosphohydrolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|P0A776|RPPH_ECOLI RNA pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=rppH PE=1 SV=1 10 133 5.0E-06
sp|B7N762|RPPH_ECOLU RNA pyrophosphohydrolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B6I6V5|RPPH_ECOSE RNA pyrophosphohydrolase OS=Escherichia coli (strain SE11) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B1LR27|RPPH_ECOSM RNA pyrophosphohydrolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|Q1R7I3|RPPH_ECOUT RNA pyrophosphohydrolase OS=Escherichia coli (strain UTI89 / UPEC) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|B2TYR1|RPPH_SHIB3 RNA pyrophosphohydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|Q32C91|RPPH_SHIDS RNA pyrophosphohydrolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|Q0T134|RPPH_SHIF8 RNA pyrophosphohydrolase OS=Shigella flexneri serotype 5b (strain 8401) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|P0A779|RPPH_SHIFL RNA pyrophosphohydrolase OS=Shigella flexneri GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|Q3YY30|RPPH_SHISS RNA pyrophosphohydrolase OS=Shigella sonnei (strain Ss046) GN=rppH PE=3 SV=1 10 133 5.0E-06
sp|A8GII0|RPPH_SERP5 RNA pyrophosphohydrolase OS=Serratia proteamaculans (strain 568) GN=rppH PE=3 SV=1 10 133 5.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5308
MPLPVTPLHGVSAIIVNAQGQLLVSQRFGSHGAGSWQMPGGHLEDGEGILFCTAREVKEESNLHVRPLRIVETTY
DLFAQAGKHYVTWFVLCEMKDADAEPETMEPDKCSGWFWKTPAHLTGLNLFLPLQQLLQKHPTVEAMTRAPGPVI
ELPSGLRRLSIRWEGRDEGEDGVVRLERDALVLGPAADVMIEGASPVVHGSFVRIIVSRPETGSYDVQWAMGRDV
VVLDRHRGRVAGLLELCGEMELITSSVAMHLILLGQQFDGIWNIEVARKRPGTSQPPPPALTLSSLKA*
Coding >Ophun1|5308
ATGCCCCTGCCCGTGACGCCTCTCCACGGCGTGAGCGCCATCATCGTCAACGCCCAGGGCCAGCTCCTCGTCAGC
CAGCGCTTCGGCAGCCATGGAGCCGGCTCGTGGCAGATGCCTGGTGGTCACCTGGAGGATGGCGAGGGCATCCTC
TTCTGCACGGCGCGCGAGGTCAAGGAAGAGTCCAACCTCCATGTCCGACCTCTGCGCATCGTGGAGACGACGTAT
GATCTCTTCGCGCAGGCGGGGAAGCATTATGTTACCTGGTTTGTCCTCTGCGAGATGAAGGATGCTGACGCGGAG
CCCGAGACGATGGAACCCGACAAGTGCTCCGGCTGGTTCTGGAAGACGCCCGCCCATCTGACGGGCCTCAACCTC
TTCCTCCCCCTCCAACAGCTACTGCAAAAGCACCCTACCGTCGAAGCCATGACTCGCGCGCCGGGCCCCGTCATC
GAGCTCCCCAGCGGCTTACGCAGGCTGAGTATCCGCTGGGAGGGTCGAGACGAGGGTGAAGACGGCGTGGTCCGG
CTGGAGAGGGATGCGCTGGTGTTGGGTCCGGCGGCTGATGTTATGATTGAGGGGGCGAGTCCCGTTGTGCATGGT
AGCTTTGTTCGCATCATTGTTTCGAGGCCCGAGACTGGGTCGTATGATGTGCAGTGGGCCATGGGGAGGGATGTT
GTGGTGCTGGATCGTCATCGGGGGAGGGTTGCTGGGTTGTTGGAGTTGTGTGGCGAGATGGAACTTATAACATCA
TCGGTCGCCATGCACCTGATTCTCTTGGGACAGCAGTTTGATGGCATCTGGAACATCGAGGTGGCGAGGAAGCGG
CCAGGGACATCACAGCCGCCACCGCCGGCCTTGACATTATCATCGTTGAAGGCGTAA
Transcript >Ophun1|5308
ATGCCCCTGCCCGTGACGCCTCTCCACGGCGTGAGCGCCATCATCGTCAACGCCCAGGGCCAGCTCCTCGTCAGC
CAGCGCTTCGGCAGCCATGGAGCCGGCTCGTGGCAGATGCCTGGTGGTCACCTGGAGGATGGCGAGGGCATCCTC
TTCTGCACGGCGCGCGAGGTCAAGGAAGAGTCCAACCTCCATGTCCGACCTCTGCGCATCGTGGAGACGACGTAT
GATCTCTTCGCGCAGGCGGGGAAGCATTATGTTACCTGGTTTGTCCTCTGCGAGATGAAGGATGCTGACGCGGAG
CCCGAGACGATGGAACCCGACAAGTGCTCCGGCTGGTTCTGGAAGACGCCCGCCCATCTGACGGGCCTCAACCTC
TTCCTCCCCCTCCAACAGCTACTGCAAAAGCACCCTACCGTCGAAGCCATGACTCGCGCGCCGGGCCCCGTCATC
GAGCTCCCCAGCGGCTTACGCAGGCTGAGTATCCGCTGGGAGGGTCGAGACGAGGGTGAAGACGGCGTGGTCCGG
CTGGAGAGGGATGCGCTGGTGTTGGGTCCGGCGGCTGATGTTATGATTGAGGGGGCGAGTCCCGTTGTGCATGGT
AGCTTTGTTCGCATCATTGTTTCGAGGCCCGAGACTGGGTCGTATGATGTGCAGTGGGCCATGGGGAGGGATGTT
GTGGTGCTGGATCGTCATCGGGGGAGGGTTGCTGGGTTGTTGGAGTTGTGTGGCGAGATGGAACTTATAACATCA
TCGGTCGCCATGCACCTGATTCTCTTGGGACAGCAGTTTGATGGCATCTGGAACATCGAGGTGGCGAGGAAGCGG
CCAGGGACATCACAGCCGCCACCGCCGGCCTTGACATTATCATCGTTGAAGGCGTAA
Gene >Ophun1|5308
ATGCCCCTGCCCGTGACGCCTCTCCACGGCGTGAGCGCCATCATCGTCAACGCCCAGGGCCAGCTCCTCGTCAGC
CAGCGCTTCGGCAGCCATGGAGCCGGTGAGTCGCCAATCCATCACCAACATGCGTCTCGTGCTGACTCGTTCGCG
TGTCTCTGTCTCTCTATCTAGGCTCGTGGCAGATGCCTGGTGGTCACCTGGAGGATGGCGAGGGCATCCTCTTCT
GCACGGCGCGCGAGGTCAAGGAAGAGTCCAACCTCCATGTCCGACCTCTGCGCATCGTGGAGACGACGTATGATC
TCTTCGCGCAGGCGGGGAAGCATTATGTTACCTGGTTTGTCCTCTGCGAGATGAAGGATGCTGACGCGGAGCCCG
AGGTGAGATGGCTTGTGCGGTGTGGCTTGGATGCTCATGACAGCGCTGACGCGTTCATCTATATAAAGACGATGG
AACCCGACAAGTGCTCCGGCTGGTTCTGGAAGACGCCCGCCCATCTGACGGGCCTCAACCTCTTCCTCCCCCTCC
AACAGCTACTGCAAAAGCACCCTACCGTCGAAGCCATGACTCGCGCGCCGGGCCCCGTCATCGAGCTCCCCAGCG
GCTTACGCAGGCTGAGTATCCGCTGGGAGGGTCGAGACGAGGGTGAAGACGGCGTGGTCCGGCTGGAGAGGGATG
CGCTGGTGTTGGGTCCGGCGGCTGATGTTATGATTGAGGGGGCGAGTCCCGTTGTGCATGGTAGCTTTGTTCGCA
TCATTGTTTCGAGGCCCGAGACTGGGTCGTATGATGTGCAGTGGGCCATGGGGAGGGATGTTGTGGTGCTGGATC
GTCATCGGGGGAGGGTTGCTGGGTTGTTGGAGTTGTGTGGCGAGATGGAGTGAGCATGAACGAACAGTAGAGGAC
AAGATGCCGGGAAAGACGATCAGTGACATGACCTTTTGGCATACAACAGAGCTAAGCTACAAAAACATGACCAGT
TTCGATAACTAAGGGGGGAAACGTCCTATCCCTCTACCACCCGAACACCATGCCAGACTTATAACATCATCGGTC
GCCATGCACCTGATTCTCTTGGGACAGCAGTTTGATGGCATCTGGAACATCGAGGTGGCGAGGAAGCGGCCAGGG
ACATCACAGCCGCCACCGCCGGCCTTGACATTATCATCGTTGAAGGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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