© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|5305 |
| Gene name | |
| Location | Contig_516:6637..7117 |
| Strand | - |
| Gene length (bp) | 480 |
| Transcript length (bp) | 417 |
| Coding sequence length (bp) | 417 |
| Protein length (aa) | 139 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06726 | BC10 | Bladder cancer-related protein BC10 | 2.4E-17 | 1 | 55 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6M5|YKS1_SCHPO | Uncharacterized protein C652.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC652.01 PE=4 SV=1 | 1 | 66 | 8.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 37 | 59 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5305 MFCLRSWLPLLFIPTNASPAFIFLFFVCTYFLNRPCVYCSILLLILFLTSCNWSDHCFFDFRSNWFLPRPDAATS DGSVFNATVVEMLNSTAKAVASAAADDIASRRAEWTGLGMEWLRSLLGRREWRVECMDIYIRL* |
| Coding | >Ophun1|5305 ATGTTCTGCCTGCGCAGCTGGCTTCCGCTGCTCTTTATCCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTC TTCGTCTGCACCTACTTCCTCAACCGGCCGTGCGTATACTGCTCGATCCTGCTCCTGATACTCTTCCTCACGTCG TGCAACTGGTCGGACCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTCCCTCGGCCCGACGCCGCCACCTCG GACGGCTCCGTCTTCAACGCCACCGTCGTCGAGATGCTCAACTCGACGGCCAAGGCCGTTGCCAGCGCCGCCGCC GACGACATCGCTTCCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGCCTCCTCGGAAGACGC GAGTGGAGGGTTGAATGCATGGATATCTATATCCGCCTGTGA |
| Transcript | >Ophun1|5305 ATGTTCTGCCTGCGCAGCTGGCTTCCGCTGCTCTTTATCCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTC TTCGTCTGCACCTACTTCCTCAACCGGCCGTGCGTATACTGCTCGATCCTGCTCCTGATACTCTTCCTCACGTCG TGCAACTGGTCGGACCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTCCCTCGGCCCGACGCCGCCACCTCG GACGGCTCCGTCTTCAACGCCACCGTCGTCGAGATGCTCAACTCGACGGCCAAGGCCGTTGCCAGCGCCGCCGCC GACGACATCGCTTCCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGCCTCCTCGGAAGACGC GAGTGGAGGGTTGAATGCATGGATATCTATATCCGCCTGTGA |
| Gene | >Ophun1|5305 ATGTTCTGCCTGCGCAGGTAAGTCGACGACGACGCCTCCTTCAAGAGACAAAACGAGGCAAATAGTTGACACCGG ACCAGCTGGCTTCCGCTGCTCTTTATCCCGACCAATGCGTCGCCAGCCTTCATATTCCTCTTCTTCGTCTGCACC TACTTCCTCAACCGGCCGTGCGTATACTGCTCGATCCTGCTCCTGATACTCTTCCTCACGTCGTGCAACTGGTCG GACCATTGCTTCTTCGACTTCCGCAGCAACTGGTTCCTCCCTCGGCCCGACGCCGCCACCTCGGACGGCTCCGTC TTCAACGCCACCGTCGTCGAGATGCTCAACTCGACGGCCAAGGCCGTTGCCAGCGCCGCCGCCGACGACATCGCT TCCCGGAGAGCCGAGTGGACCGGCCTCGGCATGGAGTGGCTTCGGAGCCTCCTCGGAAGACGCGAGTGGAGGGTT GAATGCATGGATATCTATATCCGCCTGTGA |