© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|5295 |
| Gene name | |
| Location | Contig_514:350..1709 |
| Strand | + |
| Gene length (bp) | 1359 |
| Transcript length (bp) | 1203 |
| Coding sequence length (bp) | 1203 |
| Protein length (aa) | 401 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 8.1E-22 | 145 | 263 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 2.2E-13 | 165 | 254 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 4.6E-13 | 165 | 252 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 3.5E-09 | 165 | 254 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9FR44|PEAM1_ARATH | Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 | 162 | 265 | 2.0E-09 |
| sp|Q9C6B9|PEAM3_ARATH | Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 | 162 | 269 | 3.0E-09 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 162 | 269 | 5.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5295 MDDQEVQRDTLQRDAAQPDDTQQTLDNNSKKPDSDDTRLASPLTHPNGTSIFPTLSASEQHLIAQEALEQAQAAI LLDEQVVRDESDAGYSSDGFSSATTSAQSSVRDYLYENGRRYHRFREGSYNFPNDDVEQEREDMKHAMVKLLCSQ KLLFAPIGHNPQQMLDLGTGTGIWAIEVGDQYPSAHVLGVDLSPIQPDWLPPNVRFLVDDVESTWLYPPNHFDYI HSRHTVMAVRDWRRLFRQAYQHLKPGGWIELQEIHHKPRSARPDGRPLSPDHAVAQFWARVNEGLTGLGVDLDRA AGGFLAQAMRDEGLVNLTERVFHVPIGTWPKNKVLKTVGLYWRTILLDGLQAIALGPLTRGLQWDRQQVELFLVD VRRAYHDNSALMYMPLHILYAQKPE* |
| Coding | >Ophun1|5295 ATGGACGATCAAGAGGTTCAGCGGGACACTCTCCAGCGAGATGCCGCCCAACCAGACGATACCCAGCAGACCCTC GACAACAACAGCAAGAAGCCCGACTCCGACGACACTCGCCTCGCCTCGCCACTGACGCACCCAAACGGCACCTCC ATCTTCCCCACGCTCTCCGCCTCGGAGCAGCACCTCATAGCCCAAGAGGCCCTCGAGCAGGCCCAGGCGGCCATC CTCCTCGACGAGCAGGTGGTGCGCGATGAGTCTGACGCCGGCTACAGCAGCGACGGCTTCAGCTCTGCCACTACG TCGGCCCAGTCCTCGGTGCGGGATTACCTGTACGAGAACGGCCGGCGATATCACCGCTTCCGCGAGGGTTCCTAC AACTTTCCCAACGACGACGTCGAGCAAGAGCGCGAGGACATGAAGCACGCCATGGTCAAGCTCCTCTGCTCGCAG AAGCTCCTCTTCGCCCCCATCGGCCACAATCCGCAGCAGATGCTCGATCTCGGCACCGGCACCGGCATATGGGCC ATCGAGGTGGGAGATCAGTATCCGAGCGCCCACGTGCTGGGCGTCGATCTGTCTCCCATTCAGCCCGACTGGCTG CCGCCCAACGTGCGCTTCCTCGTTGACGACGTCGAGTCGACTTGGTTGTACCCTCCCAACCATTTTGACTATATT CATTCGCGTCATACCGTCATGGCTGTACGTGACTGGCGCCGACTCTTCCGCCAGGCCTACCAGCACCTCAAGCCC GGAGGCTGGATCGAGCTCCAAGAGATCCACCACAAGCCTCGCAGCGCCCGTCCGGACGGCAGGCCCCTCTCTCCA GATCACGCCGTGGCCCAGTTCTGGGCCCGCGTCAACGAAGGCCTCACGGGGCTCGGCGTCGACCTCGACCGCGCG GCCGGAGGCTTCCTGGCACAGGCCATGCGCGATGAAGGCCTCGTCAACCTCACCGAGCGCGTCTTTCACGTCCCG ATCGGAACCTGGCCCAAGAACAAGGTCCTCAAGACGGTCGGCCTGTACTGGCGCACCATTCTGCTAGACGGTCTG CAGGCCATTGCCCTCGGGCCCCTGACCCGTGGCCTCCAATGGGACCGGCAACAGGTCGAGCTGTTCCTCGTCGAC GTCCGCCGCGCCTATCACGACAACTCGGCCCTTATGTACATGCCTCTGCATATCCTCTACGCTCAGAAGCCCGAA TGA |
| Transcript | >Ophun1|5295 ATGGACGATCAAGAGGTTCAGCGGGACACTCTCCAGCGAGATGCCGCCCAACCAGACGATACCCAGCAGACCCTC GACAACAACAGCAAGAAGCCCGACTCCGACGACACTCGCCTCGCCTCGCCACTGACGCACCCAAACGGCACCTCC ATCTTCCCCACGCTCTCCGCCTCGGAGCAGCACCTCATAGCCCAAGAGGCCCTCGAGCAGGCCCAGGCGGCCATC CTCCTCGACGAGCAGGTGGTGCGCGATGAGTCTGACGCCGGCTACAGCAGCGACGGCTTCAGCTCTGCCACTACG TCGGCCCAGTCCTCGGTGCGGGATTACCTGTACGAGAACGGCCGGCGATATCACCGCTTCCGCGAGGGTTCCTAC AACTTTCCCAACGACGACGTCGAGCAAGAGCGCGAGGACATGAAGCACGCCATGGTCAAGCTCCTCTGCTCGCAG AAGCTCCTCTTCGCCCCCATCGGCCACAATCCGCAGCAGATGCTCGATCTCGGCACCGGCACCGGCATATGGGCC ATCGAGGTGGGAGATCAGTATCCGAGCGCCCACGTGCTGGGCGTCGATCTGTCTCCCATTCAGCCCGACTGGCTG CCGCCCAACGTGCGCTTCCTCGTTGACGACGTCGAGTCGACTTGGTTGTACCCTCCCAACCATTTTGACTATATT CATTCGCGTCATACCGTCATGGCTGTACGTGACTGGCGCCGACTCTTCCGCCAGGCCTACCAGCACCTCAAGCCC GGAGGCTGGATCGAGCTCCAAGAGATCCACCACAAGCCTCGCAGCGCCCGTCCGGACGGCAGGCCCCTCTCTCCA GATCACGCCGTGGCCCAGTTCTGGGCCCGCGTCAACGAAGGCCTCACGGGGCTCGGCGTCGACCTCGACCGCGCG GCCGGAGGCTTCCTGGCACAGGCCATGCGCGATGAAGGCCTCGTCAACCTCACCGAGCGCGTCTTTCACGTCCCG ATCGGAACCTGGCCCAAGAACAAGGTCCTCAAGACGGTCGGCCTGTACTGGCGCACCATTCTGCTAGACGGTCTG CAGGCCATTGCCCTCGGGCCCCTGACCCGTGGCCTCCAATGGGACCGGCAACAGGTCGAGCTGTTCCTCGTCGAC GTCCGCCGCGCCTATCACGACAACTCGGCCCTTATGTACATGCCTCTGCATATCCTCTACGCTCAGAAGCCCGAA TGA |
| Gene | >Ophun1|5295 ATGGACGATCAAGAGGTTCAGCGGGACACTCTCCAGCGAGATGCCGCCCAACCAGACGATACCCAGCAGACCCTC GACAACAACAGCAAGAAGCCCGACTCCGACGACACTCGCCTCGCCTCGCCACTGACGCACCCAAACGGCACCTCC ATCTTCCCCACGCTCTCCGCCTCGGAGCAGCACCTCATAGCCCAAGAGGCCCTCGAGCAGGCCCAGGCGGCCATC CTCCTCGACGAGCAGGTGGTGCGCGATGAGTCTGACGCCGGCTACAGCAGCGACGGCTTCAGCTCTGCCACTACG TCGGCCCAGTCCTCGGTGCGGGATTACCTGTACGAGAACGGCCGGCGATATCACCGCTTCCGCGAGGGTTCCTAC AACTTTCCCAACGACGACGTCGAGCAAGAGGTCCGTGTCTTGTCCGTCCTTGCCTTTTCCCCCCCTCTCCGCGGC TGATATCCAGGGAAGCGCGAGGACATGAAGCACGCCATGGTCAAGCTCCTCTGCTCGCAGAAGCTCCTCTTCGCC CCCATCGGCCACAATCCGCAGCAGATGCTCGATCTCGGCACCGGCACCGGCATATGGGCCATCGAGGTGGGAGAT CAGTATCCGAGCGCCCACGTGCTGGGCGTCGATCTGTCTCCCATTCAGCCCGACTGGCTGCCGCCCAACGTGCGC TTCCTCGTTGACGACGTCGAGTCGACTTGGTTGTACCCTCCCAACCATTTTGACTATATTCATTCGCGTCATACC GTCATGGCTGTACGTGACTGGCGCCGACTCTTCCGCCAGGCCTACCAGTAGGTCGTCCAGAGAGCGAGAGAGCGA GAGGGGAGAGGCAGATGGAGCAAACAAACAAGGCCCTAAGAGAACTGAAACGTCCATCTTCTGCCCAGGCACCTC AAGCCCGGAGGCTGGATCGAGCTCCAAGAGATCCACCACAAGCCTCGCAGCGCCCGTCCGGACGGCAGGCCCCTC TCTCCAGATCACGCCGTGGCCCAGTTCTGGGCCCGCGTCAACGAAGGCCTCACGGGGCTCGGCGTCGACCTCGAC CGCGCGGCCGGAGGCTTCCTGGCACAGGCCATGCGCGATGAAGGCCTCGTCAACCTCACCGAGCGCGTCTTTCAC GTCCCGATCGGAACCTGGCCCAAGAACAAGGTCCTCAAGACGGTCGGCCTGTACTGGCGCACCATTCTGCTAGAC GGTCTGCAGGCCATTGCCCTCGGGCCCCTGACCCGTGGCCTCCAATGGGACCGGCAACAGGTCGAGCTGTTCCTC GTCGACGTCCGCCGCGCCTATCACGACAACTCGGCCCTTATGTACATGCCTCTGCATATCCTCTACGCTCAGAAG CCCGAATGA |