Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5212
Gene name
LocationContig_500:1533..2085
Strand-
Gene length (bp)552
Transcript length (bp)498
Coding sequence length (bp)498
Protein length (aa) 166

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 3.1E-14 21 138

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 49 68 19
3 80 102 22
4 117 139 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5212
MARGFAGLAGFAPIIHAALGLMLLIELGLTAFIVDRTDGFWSSPPSQFSFMLFATVWSILVLAYVALTPRFFARA
FHGLVAVILLGLTTLFWFAGSIAMAVLLGLPRCRGSFCTTTRTAQAATAFGFFIWAGFAVLAALDGMANLRGGAR
ADTTSSKQQQQPVAA*
Coding >Ophun1|5212
ATGGCTCGTGGGTTCGCTGGGTTGGCTGGCTTTGCGCCGATTATCCACGCTGCGCTGGGCCTCATGCTCCTCATC
GAGCTTGGCCTCACGGCTTTCATCGTCGACCGAACCGATGGCTTCTGGTCCTCCCCCCCCTCGCAATTCAGCTTC
ATGCTCTTCGCAACAGTCTGGTCCATCCTGGTACTGGCCTACGTGGCGCTGACGCCACGCTTCTTCGCGCGCGCC
TTCCACGGCCTGGTGGCGGTGATACTCCTCGGCCTGACGACGCTGTTCTGGTTCGCGGGATCGATTGCCATGGCG
GTGCTGCTGGGACTGCCGAGGTGTAGGGGATCGTTCTGCACGACGACGAGGACGGCGCAGGCGGCTACGGCTTTT
GGCTTCTTCATCTGGGCTGGCTTCGCTGTGCTGGCGGCTCTGGATGGCATGGCGAATTTGAGGGGGGGGGCGAGG
GCGGATACGACGTCGAGTAAGCAGCAGCAGCAGCCTGTTGCTGCCTGA
Transcript >Ophun1|5212
ATGGCTCGTGGGTTCGCTGGGTTGGCTGGCTTTGCGCCGATTATCCACGCTGCGCTGGGCCTCATGCTCCTCATC
GAGCTTGGCCTCACGGCTTTCATCGTCGACCGAACCGATGGCTTCTGGTCCTCCCCCCCCTCGCAATTCAGCTTC
ATGCTCTTCGCAACAGTCTGGTCCATCCTGGTACTGGCCTACGTGGCGCTGACGCCACGCTTCTTCGCGCGCGCC
TTCCACGGCCTGGTGGCGGTGATACTCCTCGGCCTGACGACGCTGTTCTGGTTCGCGGGATCGATTGCCATGGCG
GTGCTGCTGGGACTGCCGAGGTGTAGGGGATCGTTCTGCACGACGACGAGGACGGCGCAGGCGGCTACGGCTTTT
GGCTTCTTCATCTGGGCTGGCTTCGCTGTGCTGGCGGCTCTGGATGGCATGGCGAATTTGAGGGGGGGGGCGAGG
GCGGATACGACGTCGAGTAAGCAGCAGCAGCAGCCTGTTGCTGCCTGA
Gene >Ophun1|5212
ATGGCTCGTGGGTTCGCTGGGTTGGCTGGCTTTGCGCCGATTATCCACGCTGCGCTGGGCCTCATGCTCCTCATC
GAGCTTGGCCTCACGGCTTTCAGTACGTGTTCTAAGACGAGAGAAAGATGCGATAGCCAAACTAACACTCACGCA
GTCGTCGACCGAACCGATGGCTTCTGGTCCTCCCCCCCCTCGCAATTCAGCTTCATGCTCTTCGCAACAGTCTGG
TCCATCCTGGTACTGGCCTACGTGGCGCTGACGCCACGCTTCTTCGCGCGCGCCTTCCACGGCCTGGTGGCGGTG
ATACTCCTCGGCCTGACGACGCTGTTCTGGTTCGCGGGATCGATTGCCATGGCGGTGCTGCTGGGACTGCCGAGG
TGTAGGGGATCGTTCTGCACGACGACGAGGACGGCGCAGGCGGCTACGGCTTTTGGCTTCTTCATCTGGGCTGGC
TTCGCTGTGCTGGCGGCTCTGGATGGCATGGCGAATTTGAGGGGGGGGGCGAGGGCGGATACGACGTCGAGTAAG
CAGCAGCAGCAGCCTGTTGCTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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