Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5156
Gene name
LocationContig_5:16713..17516
Strand-
Gene length (bp)803
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04116 FA_hydroxylase Fatty acid hydroxylase 1.1E-20 85 200

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8J207|ERG3_LEPMC Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1 9 208 6.0E-48
sp|Q7SBB6|ERG3_NEUCR Probable Delta(7)-sterol 5(6)-desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1 9 205 1.0E-47
sp|Q754B9|ERG3_ASHGO Delta(7)-sterol 5(6)-desaturase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG3 PE=3 SV=2 7 217 1.0E-39
sp|O75845|SC5D_HUMAN Lathosterol oxidase OS=Homo sapiens GN=SC5D PE=1 SV=2 3 207 7.0E-38
sp|P50860|ERG3_CANGA Delta(7)-sterol 5(6)-desaturase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG3 PE=3 SV=1 7 217 3.0E-37
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Swissprot ID Swissprot Description Start End E-value
sp|Q8J207|ERG3_LEPMC Delta(7)-sterol 5(6)-desaturase OS=Leptosphaeria maculans GN=ERG3 PE=3 SV=1 9 208 6.0E-48
sp|Q7SBB6|ERG3_NEUCR Probable Delta(7)-sterol 5(6)-desaturase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06207 PE=3 SV=1 9 205 1.0E-47
sp|Q754B9|ERG3_ASHGO Delta(7)-sterol 5(6)-desaturase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG3 PE=3 SV=2 7 217 1.0E-39
sp|O75845|SC5D_HUMAN Lathosterol oxidase OS=Homo sapiens GN=SC5D PE=1 SV=2 3 207 7.0E-38
sp|P50860|ERG3_CANGA Delta(7)-sterol 5(6)-desaturase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ERG3 PE=3 SV=1 7 217 3.0E-37
sp|O93875|ERG3_CANAX Delta(7)-sterol 5(6)-desaturase OS=Candida albicans GN=ERG3 PE=3 SV=1 7 217 4.0E-37
sp|Q8NJ57|ERG3_CANDC Delta(7)-sterol 5(6)-desaturase OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=ERG3 PE=3 SV=1 1 208 9.0E-37
sp|O88822|SC5D_MOUSE Lathosterol oxidase OS=Mus musculus GN=Sc5d PE=2 SV=2 1 207 4.0E-36
sp|Q9EQS5|SC5D_RAT Lathosterol oxidase OS=Rattus norvegicus GN=Sc5d PE=1 SV=1 5 207 4.0E-36
sp|P32353|ERG3_YEAST Delta(7)-sterol 5(6)-desaturase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG3 PE=1 SV=1 7 217 3.0E-35
sp|O94457|ERG31_SCHPO Delta(7)-sterol 5(6)-desaturase erg31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg31 PE=3 SV=1 9 216 3.0E-34
sp|O13666|ERG32_SCHPO Delta(7)-sterol 5(6)-desaturase erg32 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg32 PE=3 SV=1 3 217 1.0E-33
sp|Q39208|SC5D1_ARATH Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis thaliana GN=STE1 PE=1 SV=2 65 217 2.0E-10
sp|Q9ZT29|SC5D_TOBAC Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana tabacum PE=2 SV=1 70 217 4.0E-09
sp|Q9M883|SC5D2_ARATH Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana GN=HDF7 PE=3 SV=1 85 200 4.0E-09
sp|Q9AST3|SBH2_ARATH Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 29 201 2.0E-08
sp|Q8VYI1|SBH1_ARATH Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1 82 201 4.0E-07
sp|O59933|MSMO_CANAL Methylsterol monooxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ERG25 PE=3 SV=1 80 147 7.0E-07
sp|P53045|MSMO_YEAST Methylsterol monooxygenase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG25 PE=1 SV=1 85 217 1.0E-06
sp|Q9UUH4|MSMO_SCHPO Methylsterol monooxygenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg25 PE=3 SV=1 82 132 5.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0005506 iron ion binding Yes
GO:0008610 lipid biosynthetic process Yes
GO:1901576 organic substance biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0006629 lipid metabolic process No
GO:0043169 cation binding No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0046872 metal ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 43 65 22
2 80 102 22
3 123 145 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5156
MCIVTHLFYFLFGTICYHQNFDRSLRTSAKFQRSQIRREINDSLLALVCGSFLTAPILVAQLQGYSNVYRFGSAS
WWYELAQYPLFVLFSDTCMYWLHRVFHAPVLFRMMHSKHHRYVIPTPFSAYAFHPLEAWIMSLPIYTFGFIWPMS
DVAQLVVFCSSNIWTFLLHDNRDQFHTVHHKNINYNFGQFLHLWDYLGGTYRDAETFLNPSRRQSKR*
Coding >Ophun1|5156
ATGTGCATCGTCACCCATCTCTTCTACTTCCTCTTCGGCACCATCTGCTACCACCAAAACTTCGACCGCTCGTTA
AGAACCTCTGCCAAATTCCAGCGCTCGCAGATCCGACGCGAAATCAACGACTCGCTCCTCGCCCTTGTCTGCGGC
AGCTTCCTCACAGCGCCCATTCTCGTAGCCCAGCTGCAGGGCTACTCCAACGTCTACCGCTTTGGCTCGGCCAGC
TGGTGGTATGAACTTGCGCAGTACCCCCTTTTCGTGCTGTTCAGCGATACGTGCATGTATTGGCTTCATCGTGTC
TTTCACGCGCCTGTGCTCTTTAGGATGATGCATAGCAAGCACCATCGATATGTCATACCAACCCCCTTCTCAGCC
TATGCCTTTCACCCGCTAGAAGCCTGGATCATGAGCCTGCCCATCTACACCTTTGGCTTCATCTGGCCAATGTCG
GATGTGGCTCAATTGGTAGTCTTTTGCAGCTCCAATATCTGGACCTTTCTGCTGCACGACAACCGAGATCAGTTC
CACACCGTCCACCACAAGAACATCAACTACAACTTTGGACAGTTCCTCCACTTATGGGATTACCTGGGAGGCACA
TACCGAGATGCCGAGACGTTTCTGAACCCCAGCCGACGACAATCCAAGAGATGA
Transcript >Ophun1|5156
ATGTGCATCGTCACCCATCTCTTCTACTTCCTCTTCGGCACCATCTGCTACCACCAAAACTTCGACCGCTCGTTA
AGAACCTCTGCCAAATTCCAGCGCTCGCAGATCCGACGCGAAATCAACGACTCGCTCCTCGCCCTTGTCTGCGGC
AGCTTCCTCACAGCGCCCATTCTCGTAGCCCAGCTGCAGGGCTACTCCAACGTCTACCGCTTTGGCTCGGCCAGC
TGGTGGTATGAACTTGCGCAGTACCCCCTTTTCGTGCTGTTCAGCGATACGTGCATGTATTGGCTTCATCGTGTC
TTTCACGCGCCTGTGCTCTTTAGGATGATGCATAGCAAGCACCATCGATATGTCATACCAACCCCCTTCTCAGCC
TATGCCTTTCACCCGCTAGAAGCCTGGATCATGAGCCTGCCCATCTACACCTTTGGCTTCATCTGGCCAATGTCG
GATGTGGCTCAATTGGTAGTCTTTTGCAGCTCCAATATCTGGACCTTTCTGCTGCACGACAACCGAGATCAGTTC
CACACCGTCCACCACAAGAACATCAACTACAACTTTGGACAGTTCCTCCACTTATGGGATTACCTGGGAGGCACA
TACCGAGATGCCGAGACGTTTCTGAACCCCAGCCGACGACAATCCAAGAGATGA
Gene >Ophun1|5156
ATGTGGTCCGTCCCTCTATCCCAACATTAAACTCGCTCTCACAAGCTCCAGCATCGTCACCCATCTCTTCTACTT
CCTCTTCGGCACCATCTGCTACCACCAAAACTTCGACCGCTCGTTAAGAACCTCTGCCAAATTCCAGCGCTCGCA
GATCCGACGCGAAATCAACGACTCGCTCCTCGCCCTTGTCTGCGGCAGCTTCCTCACAGCGCCCATTCTCGTAGC
CCAGCTGCAGGGCTACTCCAACGTCTACCGCTTTGGCTCGGCCAGCTGGTGGTATGAACTTGCGCAGTACCCCCT
TTTCGTGCTGTTCAGCGATACGTGCATGTATTGGCTTCATCGTGTCTTTCACGCGCCTGTGCTCTTTAGGATGAT
GCATAGCAAGCACCATCGGTGAGAAGAAGCTGTCTGTTTATGGAGATTCGCAGCTAACCATTCGAATTACAGATA
TGTCATACCAACCCCCTTCTCAGCCTATGCCTTTCACCCGCTAGAAGCCTGGATCATGAGCCTGCCCATCTACAC
CTTTGGCTTCATCTGGCCAATGTCGGATGTGGCTCAATTGGTAGTCTTTTGCAGCTCCAATATCTGGACCTTTCT
GCTGCGTAAGTTGGGACCTTGATGGCTCTAGAGTTGGCGAAGCTGACCTTTCAGACGACAACCGAGATCAGTTCC
ACACCGTCCACCACAAGAACATCAACTACAACTTTGGACAGTTCCTCCACTTATGGGATTACCTGGGAGGCACAT
ACCGAGATGCCGAGACGTTTCTGAACCCCAGCCGACGACAATCCAAGAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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