© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|5108 |
| Gene name | |
| Location | Contig_491:11542..13068 |
| Strand | + |
| Gene length (bp) | 1526 |
| Transcript length (bp) | 1455 |
| Coding sequence length (bp) | 1455 |
| Protein length (aa) | 485 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06432 | GPI2 | Phosphatidylinositol N-acetylglucosaminyltransferase | 4.4E-135 | 71 | 469 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59802|GPI2_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 | 282 | 473 | 5.0E-36 |
| sp|Q54M40|PIGC_DICDI | Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 | 298 | 474 | 2.0E-33 |
| sp|Q5PQQ4|PIGC_RAT | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 | 290 | 472 | 7.0E-25 |
| sp|Q92535|PIGC_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 | 290 | 472 | 1.0E-24 |
| sp|Q9CXR4|PIGC_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 | 290 | 472 | 2.0E-24 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59802|GPI2_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 | 282 | 473 | 5.0E-36 |
| sp|Q54M40|PIGC_DICDI | Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 | 298 | 474 | 2.0E-33 |
| sp|Q5PQQ4|PIGC_RAT | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 | 290 | 472 | 7.0E-25 |
| sp|Q92535|PIGC_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 | 290 | 472 | 1.0E-24 |
| sp|Q9CXR4|PIGC_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 | 290 | 472 | 2.0E-24 |
| sp|Q3ZBX1|PIGC_BOVIN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1 | 290 | 472 | 3.0E-24 |
| sp|O59802|GPI2_SCHPO | Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 | 35 | 159 | 4.0E-16 |
| sp|P46961|GPI2_YEAST | Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI2 PE=1 SV=2 | 294 | 475 | 1.0E-13 |
| sp|Q92535|PIGC_HUMAN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 | 67 | 185 | 5.0E-12 |
| sp|Q9CXR4|PIGC_MOUSE | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 | 71 | 185 | 5.0E-12 |
| sp|Q5PQQ4|PIGC_RAT | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 | 71 | 185 | 6.0E-12 |
| sp|Q3ZBX1|PIGC_BOVIN | Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1 | 71 | 185 | 2.0E-11 |
| sp|Q54M40|PIGC_DICDI | Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 | 71 | 130 | 1.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006497 | protein lipidation | No |
| GO:0006505 | GPI anchor metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006643 | membrane lipid metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0046488 | phosphatidylinositol metabolic process | No |
| GO:0009247 | glycolipid biosynthetic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0006661 | phosphatidylinositol biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0046474 | glycerophospholipid biosynthetic process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0046486 | glycerolipid metabolic process | No |
| GO:1903509 | liposaccharide metabolic process | No |
| GO:0008654 | phospholipid biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0046467 | membrane lipid biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0045017 | glycerolipid biosynthetic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0006664 | glycolipid metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043412 | macromolecule modification | No |
| GO:0019538 | protein metabolic process | No |
| GO:0006650 | glycerophospholipid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 115 | 134 | 19 |
| 2 | 322 | 344 | 22 |
| 3 | 374 | 391 | 17 |
| 4 | 404 | 423 | 19 |
| 5 | 433 | 455 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|5108 MAEPMDDDASVLTGSRPGRRPAALSPLQPPLQPPPAPASAPAAPLLPRVVREGGGHGRVGRNRSRRRKRAWKKLM WVKQSYPDNYTDQATFLENLQRNPRLKPYDFWPLVNDSTVILQHVCSVIIFIVCFVAIFQERVSPVSVVSCGSLA TFLGWLLWEGWVAEEEDSQDELGGGGAVARSGSIRRRGRAASVRRPLRADGVVAAAAASESASESCSSTSTMTAA TAATKPAVVVATDHVTRLAVDAMTTTTTTTTTTMTTPTTPKTTTSIPATEADPTETPGTNRVHERLETIKSALLI FSTLLGLSPILKSLTRSTSSDSIWAMSFWLLALNVFFFDYSGGVGAKFPASLSTNAALMASTVLASRLPSTKQVF SLTLFSIEVFGLFPVFRRHVRHRSWRYHVVLTVLLVLGAGLGVGIVLGDGRWPWQSGSVGMIVGIVVAAVAAGGC SWWLIGLQKYKNEIRGPWDPARPIIMSRTRWDSR* |
| Coding | >Ophun1|5108 ATGGCGGAGCCCATGGACGACGACGCCTCCGTCCTGACCGGTTCTCGCCCCGGTCGTCGGCCAGCAGCCCTCTCT CCGCTTCAGCCTCCGCTTCAGCCTCCGCCGGCTCCGGCCTCGGCTCCGGCCGCGCCTCTTCTACCGCGAGTGGTG CGCGAGGGGGGCGGACACGGGCGCGTCGGGCGCAATCGGAGTCGAAGGAGGAAGCGGGCTTGGAAGAAGCTCATG TGGGTGAAACAATCATATCCGGACAACTATACCGATCAGGCTACCTTTCTCGAGAACCTGCAGCGAAATCCGCGG CTTAAGCCGTATGATTTCTGGCCGCTGGTCAACGACTCGACTGTCATTCTGCAGCACGTCTGCTCCGTCATCATC TTCATCGTCTGCTTCGTCGCCATCTTCCAGGAGCGCGTGTCGCCCGTGTCCGTCGTCAGCTGCGGTAGCTTGGCT ACTTTTCTGGGCTGGCTGCTATGGGAAGGGTGGGTGGCCGAGGAGGAGGATTCGCAGGACGAGCTCGGGGGTGGC GGCGCTGTGGCTCGCAGTGGGAGCATTCGTCGTCGGGGCCGGGCTGCTAGCGTTCGCCGGCCGTTACGGGCGGAT GGCGTCGTGGCGGCGGCGGCTGCGTCCGAGTCGGCTTCCGAGTCTTGTTCGTCGACGTCGACCATGACGGCTGCG ACTGCGGCTACGAAGCCAGCTGTGGTGGTGGCTACGGATCATGTCACGAGGCTGGCGGTTGATGCCATGACGACG ACGACGACGACGACGACGACGACGATGACGACGCCCACGACGCCCAAGACGACGACGTCAATCCCCGCGACCGAG GCGGACCCGACCGAGACCCCGGGCACCAACCGCGTACACGAGCGACTCGAGACGATCAAGTCCGCGCTGCTCATC TTCAGCACTCTGCTGGGCCTGAGCCCGATCCTCAAGTCGCTGACGCGGTCGACGTCGAGCGACAGCATCTGGGCC ATGTCATTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCTGGCGGCGTGGGCGCCAAGTTCCCGGCC TCGCTCTCGACCAATGCGGCGCTGATGGCGTCGACGGTACTGGCCAGCCGGCTCCCTTCGACCAAGCAGGTCTTT AGCCTGACGCTCTTCAGCATCGAGGTCTTTGGCCTGTTTCCCGTCTTTCGCCGCCACGTGCGCCACCGCAGCTGG AGGTACCACGTGGTGCTGACGGTGCTGCTCGTCCTGGGCGCCGGCCTGGGCGTCGGCATCGTCCTCGGAGACGGG CGCTGGCCGTGGCAGAGCGGGTCCGTCGGCATGATTGTGGGCATCGTCGTCGCCGCCGTCGCCGCCGGAGGTTGC AGCTGGTGGCTCATCGGGCTCCAGAAGTACAAGAATGAGATACGCGGGCCGTGGGATCCGGCGAGGCCCATCATC ATGAGCCGGACGCGCTGGGACAGCCGGTAG |
| Transcript | >Ophun1|5108 ATGGCGGAGCCCATGGACGACGACGCCTCCGTCCTGACCGGTTCTCGCCCCGGTCGTCGGCCAGCAGCCCTCTCT CCGCTTCAGCCTCCGCTTCAGCCTCCGCCGGCTCCGGCCTCGGCTCCGGCCGCGCCTCTTCTACCGCGAGTGGTG CGCGAGGGGGGCGGACACGGGCGCGTCGGGCGCAATCGGAGTCGAAGGAGGAAGCGGGCTTGGAAGAAGCTCATG TGGGTGAAACAATCATATCCGGACAACTATACCGATCAGGCTACCTTTCTCGAGAACCTGCAGCGAAATCCGCGG CTTAAGCCGTATGATTTCTGGCCGCTGGTCAACGACTCGACTGTCATTCTGCAGCACGTCTGCTCCGTCATCATC TTCATCGTCTGCTTCGTCGCCATCTTCCAGGAGCGCGTGTCGCCCGTGTCCGTCGTCAGCTGCGGTAGCTTGGCT ACTTTTCTGGGCTGGCTGCTATGGGAAGGGTGGGTGGCCGAGGAGGAGGATTCGCAGGACGAGCTCGGGGGTGGC GGCGCTGTGGCTCGCAGTGGGAGCATTCGTCGTCGGGGCCGGGCTGCTAGCGTTCGCCGGCCGTTACGGGCGGAT GGCGTCGTGGCGGCGGCGGCTGCGTCCGAGTCGGCTTCCGAGTCTTGTTCGTCGACGTCGACCATGACGGCTGCG ACTGCGGCTACGAAGCCAGCTGTGGTGGTGGCTACGGATCATGTCACGAGGCTGGCGGTTGATGCCATGACGACG ACGACGACGACGACGACGACGACGATGACGACGCCCACGACGCCCAAGACGACGACGTCAATCCCCGCGACCGAG GCGGACCCGACCGAGACCCCGGGCACCAACCGCGTACACGAGCGACTCGAGACGATCAAGTCCGCGCTGCTCATC TTCAGCACTCTGCTGGGCCTGAGCCCGATCCTCAAGTCGCTGACGCGGTCGACGTCGAGCGACAGCATCTGGGCC ATGTCATTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCTGGCGGCGTGGGCGCCAAGTTCCCGGCC TCGCTCTCGACCAATGCGGCGCTGATGGCGTCGACGGTACTGGCCAGCCGGCTCCCTTCGACCAAGCAGGTCTTT AGCCTGACGCTCTTCAGCATCGAGGTCTTTGGCCTGTTTCCCGTCTTTCGCCGCCACGTGCGCCACCGCAGCTGG AGGTACCACGTGGTGCTGACGGTGCTGCTCGTCCTGGGCGCCGGCCTGGGCGTCGGCATCGTCCTCGGAGACGGG CGCTGGCCGTGGCAGAGCGGGTCCGTCGGCATGATTGTGGGCATCGTCGTCGCCGCCGTCGCCGCCGGAGGTTGC AGCTGGTGGCTCATCGGGCTCCAGAAGTACAAGAATGAGATACGCGGGCCGTGGGATCCGGCGAGGCCCATCATC ATGAGCCGGACGCGCTGGGACAGCCGGTAG |
| Gene | >Ophun1|5108 ATGGCGGAGCCCATGGACGACGACGCCTCCGTCCTGACCGGTTCTCGCCCCGGTCGTCGGCCAGCAGCCCTCTCT CCGCTTCAGCCTCCGCTTCAGCCTCCGCCGGCTCCGGCCTCGGCTCCGGCCGCGCCTCTTCTACCGCGAGTGGTG CGCGAGGGGGGCGGACACGGGCGCGTCGGGCGCAATCGGAGTCGAAGGAGGAAGCGGGCTTGGAAGAAGCTCATG TGGGTGAAACAATCATGTGCGTATCTGCCTTGTTTATTTTGCATTCCTCTTTTTTGACCTTGGCCTTGGGATTGA CCTCGGGGCTAGATCCGGACAACTATACCGATCAGGCTACCTTTCTCGAGAACCTGCAGCGAAATCCGCGGCTTA AGCCGTATGATTTCTGGCCGCTGGTCAACGACTCGACTGTCATTCTGCAGCACGTCTGCTCCGTCATCATCTTCA TCGTCTGCTTCGTCGCCATCTTCCAGGAGCGCGTGTCGCCCGTGTCCGTCGTCAGCTGCGGTAGCTTGGCTACTT TTCTGGGCTGGCTGCTATGGGAAGGGTGGGTGGCCGAGGAGGAGGATTCGCAGGACGAGCTCGGGGGTGGCGGCG CTGTGGCTCGCAGTGGGAGCATTCGTCGTCGGGGCCGGGCTGCTAGCGTTCGCCGGCCGTTACGGGCGGATGGCG TCGTGGCGGCGGCGGCTGCGTCCGAGTCGGCTTCCGAGTCTTGTTCGTCGACGTCGACCATGACGGCTGCGACTG CGGCTACGAAGCCAGCTGTGGTGGTGGCTACGGATCATGTCACGAGGCTGGCGGTTGATGCCATGACGACGACGA CGACGACGACGACGACGACGATGACGACGCCCACGACGCCCAAGACGACGACGTCAATCCCCGCGACCGAGGCGG ACCCGACCGAGACCCCGGGCACCAACCGCGTACACGAGCGACTCGAGACGATCAAGTCCGCGCTGCTCATCTTCA GCACTCTGCTGGGCCTGAGCCCGATCCTCAAGTCGCTGACGCGGTCGACGTCGAGCGACAGCATCTGGGCCATGT CATTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCTGGCGGCGTGGGCGCCAAGTTCCCGGCCTCGC TCTCGACCAATGCGGCGCTGATGGCGTCGACGGTACTGGCCAGCCGGCTCCCTTCGACCAAGCAGGTCTTTAGCC TGACGCTCTTCAGCATCGAGGTCTTTGGCCTGTTTCCCGTCTTTCGCCGCCACGTGCGCCACCGCAGCTGGAGGT ACCACGTGGTGCTGACGGTGCTGCTCGTCCTGGGCGCCGGCCTGGGCGTCGGCATCGTCCTCGGAGACGGGCGCT GGCCGTGGCAGAGCGGGTCCGTCGGCATGATTGTGGGCATCGTCGTCGCCGCCGTCGCCGCCGGAGGTTGCAGCT GGTGGCTCATCGGGCTCCAGAAGTACAAGAATGAGATACGCGGGCCGTGGGATCCGGCGAGGCCCATCATCATGA GCCGGACGCGCTGGGACAGCCGGTAG |