Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|5063
Gene name
Location	Contig_486:6616..7292
Strand	+
Gene length (bp)	676
Transcript length (bp)	618
Coding sequence length (bp)	618
Protein length (aa)	206

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16242	Pyrid_ox_like	Pyridoxamine 5'-phosphate oxidase like	3.4E-22	30	182
PF01243	Putative_PNPOx	Pyridoxamine 5'-phosphate oxidase	3.9E-08	34	116

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q01358\|BLI3_NEUCR	Protein bli-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bli-3 PE=2 SV=1	3	204	6.0E-96

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 53	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|5063 MSFSNTSVGDKPADPYRQANLDNVDVKTKISDLVDFMTACKFSMMTTHEAATNNLVSRCMALAATETGGIDLLFH TNTESHKTNDIASDSHINISFINASGEWASISGTASVVTDRDLVKKHYTPALKAWVGDLGDGTHDGSENDPRIGV VRVKMNFASYSLVAKNILSRAAEVVQGAVTGKPAHVMKLREINPKEVEQWRSVHT*
Coding	>Ophun1\|5063 ATGTCCTTCTCCAACACCTCCGTCGGCGACAAGCCCGCAGATCCCTACCGACAGGCCAACCTCGACAATGTCGAC GTCAAGACAAAAATCTCCGACCTCGTCGACTTCATGACGGCCTGCAAGTTCAGCATGATGACCACCCACGAGGCC GCCACCAATAACCTCGTGTCGCGATGCATGGCTCTGGCCGCAACCGAAACGGGCGGCATCGATCTGCTGTTCCAC ACCAACACCGAGTCGCACAAGACCAATGACATCGCCAGCGATTCCCACATCAACATCTCCTTCATCAACGCCTCG GGCGAGTGGGCTTCCATCTCCGGTACCGCCTCCGTCGTCACCGATCGCGACCTCGTCAAGAAGCACTACACGCCC GCCCTCAAGGCCTGGGTCGGAGATCTGGGCGACGGCACCCACGACGGCTCGGAAAACGACCCCCGCATCGGCGTC GTCCGCGTCAAGATGAACTTTGCCAGCTACTCGCTCGTCGCCAAGAACATCCTGAGCCGAGCCGCAGAGGTCGTG CAGGGGGCTGTGACGGGCAAGCCTGCTCACGTCATGAAGCTGAGGGAAATCAACCCCAAGGAGGTCGAGCAATGG CGTTCGGTACACACGTAA
Transcript	>Ophun1\|5063 ATGTCCTTCTCCAACACCTCCGTCGGCGACAAGCCCGCAGATCCCTACCGACAGGCCAACCTCGACAATGTCGAC GTCAAGACAAAAATCTCCGACCTCGTCGACTTCATGACGGCCTGCAAGTTCAGCATGATGACCACCCACGAGGCC GCCACCAATAACCTCGTGTCGCGATGCATGGCTCTGGCCGCAACCGAAACGGGCGGCATCGATCTGCTGTTCCAC ACCAACACCGAGTCGCACAAGACCAATGACATCGCCAGCGATTCCCACATCAACATCTCCTTCATCAACGCCTCG GGCGAGTGGGCTTCCATCTCCGGTACCGCCTCCGTCGTCACCGATCGCGACCTCGTCAAGAAGCACTACACGCCC GCCCTCAAGGCCTGGGTCGGAGATCTGGGCGACGGCACCCACGACGGCTCGGAAAACGACCCCCGCATCGGCGTC GTCCGCGTCAAGATGAACTTTGCCAGCTACTCGCTCGTCGCCAAGAACATCCTGAGCCGAGCCGCAGAGGTCGTG CAGGGGGCTGTGACGGGCAAGCCTGCTCACGTCATGAAGCTGAGGGAAATCAACCCCAAGGAGGTCGAGCAATGG CGTTCGGTACACACGTAA
Gene	>Ophun1\|5063 ATGTCCTTCTCCAACACCTCCGTCGGCGACAAGCCCGCAGATCCCTACCGACAGGCCAACCTCGACAATGTCGAC GTCAAGACAAAAATCTCCGACCTCGTCGACTTCATGACGGCCTGCAAGTTCAGCATGATGACCACCCACGAGGCC GCCACCAATAACCTCGTGTCGCGATGCATGGCTCTGGCCGCAACCGTGAGAGTCCTTGATGCCGTTCGCTGCAGA GACGTCGCCTAACTCCTCCTCCTCTCAGGAAACGGGCGGCATCGATCTGCTGTTCCACACCAACACCGAGTCGCA CAAGACCAATGACATCGCCAGCGATTCCCACATCAACATCTCCTTCATCAACGCCTCGGGCGAGTGGGCTTCCAT CTCCGGTACCGCCTCCGTCGTCACCGATCGCGACCTCGTCAAGAAGCACTACACGCCCGCCCTCAAGGCCTGGGT CGGAGATCTGGGCGACGGCACCCACGACGGCTCGGAAAACGACCCCCGCATCGGCGTCGTCCGCGTCAAGATGAA CTTTGCCAGCTACTCGCTCGTCGCCAAGAACATCCTGAGCCGAGCCGCAGAGGTCGTGCAGGGGGCTGTGACGGG CAAGCCTGCTCACGTCATGAAGCTGAGGGAAATCAACCCCAAGGAGGTCGAGCAATGGCGTTCGGTACACACGTA A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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