Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|5001
Gene name
LocationContig_477:10402..11657
Strand+
Gene length (bp)1255
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07970 COPIIcoated_ERV Endoplasmic reticulum vesicle transporter 1.3E-34 177 338
PF13850 ERGIC_N Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 4.5E-22 22 108

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erv41 PE=1 SV=1 21 367 4.0E-45
sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1 21 347 4.0E-41
sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1 19 374 3.0E-40
sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Mus musculus GN=Ergic2 PE=1 SV=1 19 358 6.0E-40
sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1 19 374 6.0E-40
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erv41 PE=1 SV=1 21 367 4.0E-45
sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1 21 347 4.0E-41
sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1 19 374 3.0E-40
sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Mus musculus GN=Ergic2 PE=1 SV=1 19 358 6.0E-40
sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1 19 374 6.0E-40
sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Homo sapiens GN=ERGIC2 PE=1 SV=2 19 374 5.0E-39
sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1 21 355 2.0E-38
sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1 24 355 3.0E-37
sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1 24 339 1.0E-36
sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Danio rerio GN=ergic2 PE=2 SV=1 19 336 1.0E-33
sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1 21 355 4.0E-32
sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1 21 355 8.0E-32
sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1 21 355 1.0E-31
sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=1 SV=1 21 355 2.0E-31
sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1 19 338 4.0E-30
sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1 21 355 6.0E-30
sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1 19 341 7.0E-17
sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2 17 339 2.0E-14
sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens GN=ERGIC1 PE=1 SV=1 189 339 3.0E-06
sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus GN=Ergic1 PE=1 SV=1 189 339 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|5001
MNGFEKHDLDDDRFGAKGSIVSAFDAFPKSKPQYVTRTSGGGKWTVAMGLVSMVLLWSEMSRWWRGSESHAFAVE
KGVSQSMQINLDAVVRMQCADLNINVQDAAGDRIRAGTRLRLDQTSWSQWINSKGIHQLGRDSDGRVITGAGWQS
LAHGEEGFGEEHVHDIVAAGKRRARWAKTPRVHGTPDSCRIYGSLELNKVQGDFHITARGHGYLEGGDHLDHDKF
NFSHIISELSYGPFYPSLVNPLDRTYNMAKANFHKFQYFLSVVPTVYTVGSSSIVTNQYAVTEQSIEINEMSIPG
IFFKYDIEPILLSVEETRDGILVFLVKLINVLSGVLVAGHWGYTLTEWVREVRGKRKRSTAGEGVLGNKDGYED*
Coding >Ophun1|5001
ATGAACGGCTTCGAGAAGCACGACTTGGACGATGACCGCTTCGGCGCAAAGGGCAGCATCGTCAGTGCCTTTGAT
GCCTTTCCCAAGTCGAAACCGCAATATGTGACGAGGACGTCGGGCGGCGGCAAATGGACCGTGGCCATGGGCCTG
GTGTCGATGGTGCTGCTATGGAGTGAGATGTCGCGCTGGTGGCGCGGGTCCGAGTCGCACGCCTTTGCCGTCGAA
AAGGGCGTCTCGCAGTCGATGCAAATCAACCTAGACGCCGTTGTCCGCATGCAATGCGCAGACCTCAACATCAAC
GTCCAGGATGCCGCCGGCGATCGCATCCGCGCCGGCACGCGCCTACGCCTCGACCAGACGAGCTGGAGTCAGTGG
ATCAACTCAAAGGGTATCCATCAGCTGGGCCGAGACAGCGACGGTCGCGTCATCACCGGTGCCGGCTGGCAGAGC
CTGGCTCACGGAGAGGAGGGCTTTGGCGAGGAGCACGTCCACGACATTGTCGCCGCTGGGAAGCGGAGGGCGCGC
TGGGCCAAGACGCCTAGAGTCCACGGGACGCCCGACAGCTGCCGCATCTACGGCAGTCTGGAGCTCAACAAGGTT
CAGGGCGACTTTCACATCACGGCTCGCGGTCACGGCTATCTAGAGGGCGGCGACCATCTGGACCACGATAAATTC
AACTTTTCGCACATCATCTCGGAGCTCTCGTACGGCCCTTTTTACCCTTCGCTCGTCAACCCGCTCGACCGCACC
TACAACATGGCCAAGGCCAACTTCCACAAGTTTCAGTACTTCTTGTCCGTGGTGCCGACCGTCTACACAGTCGGA
TCGAGCTCCATCGTGACGAACCAGTACGCGGTGACGGAGCAGAGCATCGAGATTAACGAAATGTCCATCCCGGGC
ATCTTCTTCAAGTACGATATCGAGCCGATCCTGCTGTCGGTAGAGGAGACTCGTGACGGCATCCTCGTCTTTCTC
GTCAAGCTCATCAACGTCCTCTCCGGCGTTCTCGTCGCCGGTCACTGGGGCTATACCCTCACCGAGTGGGTGCGA
GAGGTCCGTGGCAAGCGCAAGCGGAGCACGGCCGGCGAGGGCGTCTTGGGCAACAAGGACGGTTACGAAGATTAG
Transcript >Ophun1|5001
ATGAACGGCTTCGAGAAGCACGACTTGGACGATGACCGCTTCGGCGCAAAGGGCAGCATCGTCAGTGCCTTTGAT
GCCTTTCCCAAGTCGAAACCGCAATATGTGACGAGGACGTCGGGCGGCGGCAAATGGACCGTGGCCATGGGCCTG
GTGTCGATGGTGCTGCTATGGAGTGAGATGTCGCGCTGGTGGCGCGGGTCCGAGTCGCACGCCTTTGCCGTCGAA
AAGGGCGTCTCGCAGTCGATGCAAATCAACCTAGACGCCGTTGTCCGCATGCAATGCGCAGACCTCAACATCAAC
GTCCAGGATGCCGCCGGCGATCGCATCCGCGCCGGCACGCGCCTACGCCTCGACCAGACGAGCTGGAGTCAGTGG
ATCAACTCAAAGGGTATCCATCAGCTGGGCCGAGACAGCGACGGTCGCGTCATCACCGGTGCCGGCTGGCAGAGC
CTGGCTCACGGAGAGGAGGGCTTTGGCGAGGAGCACGTCCACGACATTGTCGCCGCTGGGAAGCGGAGGGCGCGC
TGGGCCAAGACGCCTAGAGTCCACGGGACGCCCGACAGCTGCCGCATCTACGGCAGTCTGGAGCTCAACAAGGTT
CAGGGCGACTTTCACATCACGGCTCGCGGTCACGGCTATCTAGAGGGCGGCGACCATCTGGACCACGATAAATTC
AACTTTTCGCACATCATCTCGGAGCTCTCGTACGGCCCTTTTTACCCTTCGCTCGTCAACCCGCTCGACCGCACC
TACAACATGGCCAAGGCCAACTTCCACAAGTTTCAGTACTTCTTGTCCGTGGTGCCGACCGTCTACACAGTCGGA
TCGAGCTCCATCGTGACGAACCAGTACGCGGTGACGGAGCAGAGCATCGAGATTAACGAAATGTCCATCCCGGGC
ATCTTCTTCAAGTACGATATCGAGCCGATCCTGCTGTCGGTAGAGGAGACTCGTGACGGCATCCTCGTCTTTCTC
GTCAAGCTCATCAACGTCCTCTCCGGCGTTCTCGTCGCCGGTCACTGGGGCTATACCCTCACCGAGTGGGTGCGA
GAGGTCCGTGGCAAGCGCAAGCGGAGCACGGCCGGCGAGGGCGTCTTGGGCAACAAGGACGGTTACGAAGATTAG
Gene >Ophun1|5001
ATGAACGGCTTCGAGAAGCACGACTTGGACGATGACCGCTTCGGCGCAAAGGGCAGCATCGTCAGTGCCTTTGAT
GCCTTTCGTGAGCAGCCCTTTTCCGTGACTTGTCTCCCTACGGAGAATATCTTCTGACGACGAGCGGCCCGAGGC
CAACGTTAGCCAAGTCGAAACCGCAATATGTGACGAGGACGTCGGGCGGCGGCAAATGGACCGTGGCCATGGGCC
TGGTGTCGATGGTGCTGCTATGGAGTGAGATGTCGCGCTGGTGGCGCGGGTCCGAGTCGCACGCCTTTGCCGTCG
AAAAGGGCGTCTCGCAGTCGATGCAAATCAACCTAGACGCCGTTGTCCGCATGCAATGCGCAGACCTCAACATCA
ACGTCCAGGATGCCGCCGGCGATCGCATCCGCGCCGGCACGCGCCTACGCCTCGACCAGACGAGCTGGAGTCAGT
GGATCAACTCAAAGGGTATCCATCAGCTGGGCCGAGACAGCGACGGTCGCGTCATCACCGGTGCCGGCTGGCAGA
GCCTGGCTCACGGAGAGGAGGGCTTTGGCGAGGAGCACGTCCACGACATTGTCGCCGCTGGGAAGCGGAGGGCGC
GCTGGGCCAAGACGCCTAGAGTCCACGGGACGCCCGACAGCTGCCGCATCTACGGCAGTCTGGAGCTCAACAAGG
TTCAGGGCGACTTTCACATCACGGCTCGCGGTCACGGCTATCTAGAGGGCGGCGACCATCTGGACCACGATAGTG
CGTTTGCCTTGGTTGTGCTTCAGCTGTCGTATCTGACTGGTGTCTTGCAGAATTCAACTTTTCGCACATCATCTC
GGAGCTCTCGTACGGCCCTTTTTACCCTTCGCTCGTCAACCCGCTCGACCGCACCTACAACATGGCCAAGGCCAA
CTTCCACAAGTTTCAGTACTTCTTGTCCGTGGTGCCGACCGTCTACACAGTCGGATCGAGCTCCATCGTGACGAA
CCAGTACGCGGTGACGGAGCAGAGCATCGAGATTAACGAAATGTCCATCCCGGGCATCTTCTTCAAGTACGATAT
CGAGCCGATCCTGCTGTCGGTAGAGGAGACTCGTGACGGCATCCTCGTCTTTCTCGTCAAGCTCATCAACGTCCT
CTCCGGCGTTCTCGTCGCCGGTCACTGGGGCTATACCCTCACCGAGTGGGTGCGAGAGGTCCGTGGCAAGCGCAA
GCGGAGCACGGCCGGCGAGGGCGTCTTGGGCAACAAGGACGGTTACGAAGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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