Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|500
Gene name
LocationContig_1147:2103..3521
Strand-
Gene length (bp)1418
Transcript length (bp)1269
Coding sequence length (bp)1269
Protein length (aa) 423

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06728 PIG-U GPI transamidase subunit PIG-U 7.9E-125 12 387

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9H490|PIGU_HUMAN Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Homo sapiens GN=PIGU PE=1 SV=3 26 411 1.0E-73
sp|Q8CHJ1|PIGU_RAT Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Rattus norvegicus GN=Pigu PE=1 SV=3 26 411 2.0E-73
sp|Q8K358|PIGU_MOUSE Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Mus musculus GN=Pigu PE=1 SV=4 26 411 3.0E-73
sp|Q8CHJ0|PIGU_CRIGR Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Cricetulus griseus GN=PIGU PE=1 SV=3 26 411 6.0E-73
sp|P41733|CDC91_YEAST GPI transamidase component GAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAB1 PE=1 SV=1 16 422 6.0E-59
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9H490|PIGU_HUMAN Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Homo sapiens GN=PIGU PE=1 SV=3 26 411 1.0E-73
sp|Q8CHJ1|PIGU_RAT Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Rattus norvegicus GN=Pigu PE=1 SV=3 26 411 2.0E-73
sp|Q8K358|PIGU_MOUSE Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Mus musculus GN=Pigu PE=1 SV=4 26 411 3.0E-73
sp|Q8CHJ0|PIGU_CRIGR Phosphatidylinositol glycan anchor biosynthesis class U protein OS=Cricetulus griseus GN=PIGU PE=1 SV=3 26 411 6.0E-73
sp|P41733|CDC91_YEAST GPI transamidase component GAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAB1 PE=1 SV=1 16 422 6.0E-59
sp|O13883|PIGU_SCHPO GPI transamidase component GAB1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.01 PE=3 SV=2 27 422 4.0E-54
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 7 24 17
2 85 107 22
3 128 145 17
4 179 201 22
5 222 244 22
6 277 299 22
7 306 325 19
8 349 371 22
9 378 400 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|500
MTLRGKAGVYAAAALLRLFLMVAFPGLSDLLTGRVEISTPMTSFKRLQEGLFLYNHNVSPYDGGVYHQAPLLLPL
FSLLPDVKRWPIFTTVLYILVDLLCADALVAIADSGEAGQSRHFASPRRARRASGLLVAAAFLFNPFTIATCMAR
STTVFTSCAILHAIARAVHGSPFSALVALSFAAYLSMSPLLLLPPLVLLAWDRRSHRPGPSPSVADFAAKCLLTV
AACLAVLVAMSLVVTGNSFDFLARTYGIQLTLSDLTPNVGLWWYFFIEMFDSFRAFFLAVFWLHLSSYVGGLTIR
FRSQPLVVLTLLLGILAIFKPYPCIGDTSLFLAMLPLFWHLFPLMRYTFVASATILYATFLGPAFYHLWIYAGSG
NANFFYAITLVWSLGQSLLVSDLAFAVIRDEWELDRPEMVGKDVKQI*
Coding >Ophun1|500
ATGACGTTGCGAGGCAAGGCTGGCGTGTACGCCGCCGCCGCGCTGCTGCGACTCTTCTTAATGGTCGCCTTTCCC
GGTCTGTCGGATCTGCTGACGGGCCGTGTTGAGATCTCGACGCCAATGACGAGCTTTAAACGACTACAGGAGGGA
CTCTTTCTCTACAACCACAACGTTTCACCCTATGATGGCGGAGTCTATCATCAGGCGCCACTGCTTCTCCCGCTC
TTTTCGCTGCTCCCGGACGTCAAGCGCTGGCCCATCTTCACGACGGTGCTCTACATCCTCGTCGACCTTCTCTGC
GCCGATGCCCTGGTCGCCATTGCCGACTCGGGCGAGGCCGGCCAGTCGCGTCACTTTGCCTCACCTCGTCGAGCT
CGTCGAGCATCCGGCCTCTTGGTCGCCGCCGCCTTCCTCTTCAATCCCTTCACAATAGCCACCTGCATGGCCCGC
TCAACAACCGTCTTCACCTCATGCGCCATCCTCCACGCCATCGCCAGGGCCGTCCACGGCTCGCCCTTTAGCGCC
CTCGTGGCCCTCTCCTTCGCCGCCTACCTCTCCATGTCTCCGCTGTTGCTCCTCCCTCCGCTCGTCCTCCTGGCC
TGGGACCGCCGCTCACACCGGCCCGGCCCGTCGCCGTCCGTCGCCGACTTCGCTGCCAAGTGCCTGCTCACCGTG
GCCGCCTGTCTCGCCGTCTTGGTGGCCATGTCGCTCGTCGTGACGGGTAACTCGTTCGACTTCCTGGCCCGCACC
TACGGCATCCAGCTGACGCTCTCGGACCTGACACCCAATGTTGGCCTTTGGTGGTACTTCTTTATCGAGATGTTC
GACTCCTTCCGCGCCTTTTTCCTCGCCGTCTTCTGGCTGCACCTGTCGTCGTACGTCGGCGGCCTCACCATTCGA
TTTCGCTCCCAGCCTCTCGTCGTCCTCACCCTGCTGCTCGGAATCCTCGCCATCTTCAAGCCCTACCCCTGCATC
GGCGACACCAGCCTGTTCCTGGCCATGCTGCCGCTCTTCTGGCACCTGTTTCCTCTGATGCGCTACACCTTTGTC
GCCTCCGCCACCATCCTGTACGCCACCTTTCTGGGCCCGGCCTTTTACCACCTCTGGATCTACGCCGGCAGCGGC
AATGCAAACTTTTTCTACGCCATCACCTTGGTTTGGAGTCTGGGCCAGAGCCTGCTCGTGTCGGATCTGGCATTC
GCCGTCATCAGAGACGAGTGGGAGCTGGACAGGCCCGAGATGGTAGGGAAGGACGTCAAGCAGATCTAG
Transcript >Ophun1|500
ATGACGTTGCGAGGCAAGGCTGGCGTGTACGCCGCCGCCGCGCTGCTGCGACTCTTCTTAATGGTCGCCTTTCCC
GGTCTGTCGGATCTGCTGACGGGCCGTGTTGAGATCTCGACGCCAATGACGAGCTTTAAACGACTACAGGAGGGA
CTCTTTCTCTACAACCACAACGTTTCACCCTATGATGGCGGAGTCTATCATCAGGCGCCACTGCTTCTCCCGCTC
TTTTCGCTGCTCCCGGACGTCAAGCGCTGGCCCATCTTCACGACGGTGCTCTACATCCTCGTCGACCTTCTCTGC
GCCGATGCCCTGGTCGCCATTGCCGACTCGGGCGAGGCCGGCCAGTCGCGTCACTTTGCCTCACCTCGTCGAGCT
CGTCGAGCATCCGGCCTCTTGGTCGCCGCCGCCTTCCTCTTCAATCCCTTCACAATAGCCACCTGCATGGCCCGC
TCAACAACCGTCTTCACCTCATGCGCCATCCTCCACGCCATCGCCAGGGCCGTCCACGGCTCGCCCTTTAGCGCC
CTCGTGGCCCTCTCCTTCGCCGCCTACCTCTCCATGTCTCCGCTGTTGCTCCTCCCTCCGCTCGTCCTCCTGGCC
TGGGACCGCCGCTCACACCGGCCCGGCCCGTCGCCGTCCGTCGCCGACTTCGCTGCCAAGTGCCTGCTCACCGTG
GCCGCCTGTCTCGCCGTCTTGGTGGCCATGTCGCTCGTCGTGACGGGTAACTCGTTCGACTTCCTGGCCCGCACC
TACGGCATCCAGCTGACGCTCTCGGACCTGACACCCAATGTTGGCCTTTGGTGGTACTTCTTTATCGAGATGTTC
GACTCCTTCCGCGCCTTTTTCCTCGCCGTCTTCTGGCTGCACCTGTCGTCGTACGTCGGCGGCCTCACCATTCGA
TTTCGCTCCCAGCCTCTCGTCGTCCTCACCCTGCTGCTCGGAATCCTCGCCATCTTCAAGCCCTACCCCTGCATC
GGCGACACCAGCCTGTTCCTGGCCATGCTGCCGCTCTTCTGGCACCTGTTTCCTCTGATGCGCTACACCTTTGTC
GCCTCCGCCACCATCCTGTACGCCACCTTTCTGGGCCCGGCCTTTTACCACCTCTGGATCTACGCCGGCAGCGGC
AATGCAAACTTTTTCTACGCCATCACCTTGGTTTGGAGTCTGGGCCAGAGCCTGCTCGTGTCGGATCTGGCATTC
GCCGTCATCAGAGACGAGTGGGAGCTGGACAGGCCCGAGATGGTAGGGAAGGACGTCAAGCAGATCTAG
Gene >Ophun1|500
ATGACGTTGCGAGGCAAGGCTGGCGTGTACGCCGCCGCCGCGCTGCTGCGACTCTTCTTAATGGTCGCCTTTCCC
GGTCTGTCGGATCTGCTGACGGGCCGTGTTGAGATCTCGACGCCAATGACGAGCTTTAAACGACGTGAGTCTTGC
AGTCGTGTCTTGACCATGGCTTCACTGTTGACGGGGTTGCTTGATGGCAGTACAGGAGGGACTCTTTCTCTACAA
CCACAACGTTTCACCCTATGATGGCGGAGTCTATCATCAGGCGCCACTGCTTCTCCCGCTCTTTTCGCTGCTCCC
GGACGTCAAGCGCTGGCCCATCTTCACGACGGTGCTCTACATCCTCGTCGACCTTCTCTGCGCCGATGCCCTGGT
CGCCATTGCCGACTCGGGCGAGGCCGGCCAGTCGCGTCACTTTGCCTCACCTCGTCGAGCTCGTCGAGCATCCGG
CCTCTTGGTCGCCGCCGCGTGAGTCCTTTTCTTTGTCCCCCTTGCCCTCTTTACCTCATCAACTTCTTCCGAGAG
CTCAACGGCCAACACGTACCAACATGACTAGCTTCCTCTTCAATCCCTTCACAATAGCCACCTGCATGGCCCGCT
CAACAACCGTCTTCACCTCATGCGCCATCCTCCACGCCATCGCCAGGGCCGTCCACGGCTCGCCCTTTAGCGCCC
TCGTGGCCCTCTCCTTCGCCGCCTACCTCTCCATGTCTCCGCTGTTGCTCCTCCCTCCGCTCGTCCTCCTGGCCT
GGGACCGCCGCTCACACCGGCCCGGCCCGTCGCCGTCCGTCGCCGACTTCGCTGCCAAGTGCCTGCTCACCGTGG
CCGCCTGTCTCGCCGTCTTGGTGGCCATGTCGCTCGTCGTGACGGGTAACTCGTTCGACTTCCTGGCCCGCACCT
ACGGCATCCAGCTGACGCTCTCGGACCTGACACCCAATGTTGGCCTTTGGTGGTACTTCTTTATCGAGATGTTCG
ACTCCTTCCGCGCCTTTTTCCTCGCCGTCTTCTGGCTGCACCTGTCGTCGTACGTCGGCGGCCTCACCATTCGAT
TTCGCTCCCAGCCTCTCGTCGTCCTCACCCTGCTGCTCGGAATCCTCGCCATCTTCAAGCCCTACCCCTGCATCG
GCGACACCAGCCTGTTCCTGGCCATGCTGCCGCTCTTCTGGCACCTGTTTCCTCTGATGCGCTACACCTTTGTCG
CCTCCGCCACCATCCTGTACGCCACCTTTCTGGGCCCGGCCTTTTACCACCTCTGGATCTACGCCGGCAGCGGCA
ATGCAAACTTTTTCTACGCCATCACCTTGGTTTGGAGTCTGGGCCAGAGCCTGCTCGTGTCGGATCTGGCATTCG
CCGTCATCAGAGACGAGTGGGAGCTGGACAGGCCCGAGATGGTAGGGAAGGACGTCAAGCAGATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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