Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|4995
Gene name
Location	Contig_476:10006..11024
Strand	+
Gene length (bp)	1018
Transcript length (bp)	879
Coding sequence length (bp)	879
Protein length (aa)	293

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04893	Yip1	Yip1 domain	4.6E-14	94	250

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	264	2.0E-42
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	16	263	2.0E-28
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	69	263	2.0E-28
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	16	263	3.0E-28
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	68	263	7.0E-28

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9UTD3\|YIP5_SCHPO	Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1	10	264	2.0E-42
sp\|Q91VU1\|YIPF1_MOUSE	Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1	16	263	2.0E-28
sp\|Q9Y548\|YIPF1_HUMAN	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	69	263	2.0E-28
sp\|Q6P6G5\|YIPF1_RAT	Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1	16	263	3.0E-28
sp\|Q5RBL0\|YIPF1_PONAB	Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1	68	263	7.0E-28
sp\|Q54TS4\|YIPF1_DICDI	Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1	54	267	5.0E-27
sp\|Q99LP8\|YIPF2_MOUSE	Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1	66	263	5.0E-25
sp\|Q9BWQ6\|YIPF2_HUMAN	Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=1 SV=1	69	273	7.0E-25
sp\|Q5XIT3\|YIPF2_RAT	Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1	66	263	1.0E-20
sp\|P53108\|YIP5_YEAST	Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1	71	263	1.0E-14

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GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 56	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	111	133	22
2	148	170	22
3	183	202	19
4	207	229	22
5	242	264	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|4995 MSGSGYDAVVDVDDEGDLGHTDLQEDLEFHNSNFNESTSGGSRKGRPTTSLPPPVTASTSSPSSKRFLWTLSFYA QFFDVDTSAVLSRCWAALFPRANFLDVLEGNPDLYGPFWIATTVVLILFLGGTISQYLSTTRNTPFAYDFRLLSG AAGLVYGYTLFLPVLLFLALRYFGSESANLLECWALYGYSNLIWIPVAIISWSPISILNWVFVAVGFSLSVAFLV RNLYPVLSATDKQISKVLLVLVVMLHAGLSLTIKILFFAHGSPVARAPGQGGPGKSGADGKTPEGRF*
Coding	>Ophun1\|4995 ATGTCCGGTTCCGGGTACGACGCAGTGGTGGACGTGGACGACGAGGGCGACCTCGGACACACGGACCTTCAGGAG GATCTCGAGTTTCACAATTCCAACTTCAACGAGTCGACATCCGGTGGCAGCCGCAAGGGCCGACCGACGACAAGC CTGCCCCCGCCAGTGACGGCGTCGACGTCATCCCCGTCGTCGAAGCGCTTCCTGTGGACCCTGTCTTTCTATGCG CAATTCTTCGATGTCGATACGTCGGCTGTTTTGTCGCGGTGCTGGGCCGCGCTGTTCCCGCGGGCCAACTTCCTT GACGTGCTCGAGGGCAATCCCGACTTGTATGGACCGTTCTGGATTGCCACGACGGTTGTTCTCATCTTGTTCTTG GGCGGTACCATAAGCCAGTACCTCTCGACCACGAGGAACACGCCGTTCGCATACGATTTCAGACTTTTGAGCGGC GCTGCTGGTCTCGTGTATGGGTACACGCTTTTCCTCCCTGTCCTTCTCTTCCTCGCACTCCGATATTTTGGCAGC GAGTCAGCGAATCTTCTCGAATGCTGGGCGCTATATGGCTATTCCAACCTCATCTGGATCCCGGTGGCCATCATC AGCTGGTCGCCGATATCGATTCTCAACTGGGTCTTCGTTGCCGTCGGCTTTAGTCTGTCTGTCGCTTTCCTCGTC CGCAACCTGTACCCTGTGTTGAGCGCGACCGATAAGCAGATCAGCAAAGTGCTGCTAGTACTCGTCGTAATGCTT CATGCCGGCCTTTCGCTTACAATCAAGATTCTGTTCTTCGCTCACGGAAGTCCAGTAGCGAGGGCTCCGGGCCAG GGTGGTCCGGGGAAATCGGGGGCCGATGGCAAGACACCTGAAGGCAGGTTTTAA
Transcript	>Ophun1\|4995 ATGTCCGGTTCCGGGTACGACGCAGTGGTGGACGTGGACGACGAGGGCGACCTCGGACACACGGACCTTCAGGAG GATCTCGAGTTTCACAATTCCAACTTCAACGAGTCGACATCCGGTGGCAGCCGCAAGGGCCGACCGACGACAAGC CTGCCCCCGCCAGTGACGGCGTCGACGTCATCCCCGTCGTCGAAGCGCTTCCTGTGGACCCTGTCTTTCTATGCG CAATTCTTCGATGTCGATACGTCGGCTGTTTTGTCGCGGTGCTGGGCCGCGCTGTTCCCGCGGGCCAACTTCCTT GACGTGCTCGAGGGCAATCCCGACTTGTATGGACCGTTCTGGATTGCCACGACGGTTGTTCTCATCTTGTTCTTG GGCGGTACCATAAGCCAGTACCTCTCGACCACGAGGAACACGCCGTTCGCATACGATTTCAGACTTTTGAGCGGC GCTGCTGGTCTCGTGTATGGGTACACGCTTTTCCTCCCTGTCCTTCTCTTCCTCGCACTCCGATATTTTGGCAGC GAGTCAGCGAATCTTCTCGAATGCTGGGCGCTATATGGCTATTCCAACCTCATCTGGATCCCGGTGGCCATCATC AGCTGGTCGCCGATATCGATTCTCAACTGGGTCTTCGTTGCCGTCGGCTTTAGTCTGTCTGTCGCTTTCCTCGTC CGCAACCTGTACCCTGTGTTGAGCGCGACCGATAAGCAGATCAGCAAAGTGCTGCTAGTACTCGTCGTAATGCTT CATGCCGGCCTTTCGCTTACAATCAAGATTCTGTTCTTCGCTCACGGAAGTCCAGTAGCGAGGGCTCCGGGCCAG GGTGGTCCGGGGAAATCGGGGGCCGATGGCAAGACACCTGAAGGCAGGTTTTAA
Gene	>Ophun1\|4995 ATGTCCGGTTCCGGGTACGACGCAGTGGTGGACGTGGACGACGAGGTAGTTATGCCTTTTCTTCAGCGGCGAGGA AATCACTTTGTTGACCATAGTCGTGCCCGCTTCCACACGCGCAGGGCGACCTCGGACACACGGACCTTCAGGAGG ATCTCGAGTTTCACAATTCCAACTTCAACGAGTCGACATCCGGTGGCAGCCGCAAGGGCCGACCGACGACAAGCC TGCCCCCGCCAGTGACGGCGTCGACGTCATCCCCGTCGTCGAAGCGCTTCCTGTGGACCCTGTCTTTCTATGCGC AATTCTTCGATGTCGATACGTCGGCTGTTTTGTCGCGGTGCTGGGCCGCGCTGTTCCCGCGGGCCAACTTCCTTG ACGTGCTCGAGGGCAATCCCGACTTGTATGGACCGTTCTGGATTGCCACGACGGTTGTTCTCATCTTGTTCTTGG GCGGTACCATAAGCCAGTACCTCTCGACCACGAGGAACACGCCGTTCGCATACGATTTCAGACTTTTGAGCGGTA ATGGGCTCCTTTTGCAGTGCTTTCTTCCGGCCGCGCTGACGTCTTAATTTCTATTTTGCTAGGCGCTGCTGGTCT CGTGTATGGGTACACGCTTTTCCTCCCTGTCCTTCTCTTCCTCGCACTCCGATATTTTGGCAGCGAGTCAGCGAA TCTTCTCGAATGCTGGGCGCTATATGGCTATTCCAACCTCATCTGGATCCCGGTGGCCATCATCAGCTGGTCGCC GATATCGATTCTCAACTGGGTCTTCGTTGCCGTCGGCTTTAGTCTGTCTGTCGCTTTCCTCGTCCGCAACCTGTA CCCTGTGTTGAGCGCGACCGATAAGCAGATCAGCAAAGTGCTGCTAGTACTCGTCGTAATGCTTCATGCCGGCCT TTCGCTTACAATCAAGATTCTGTTCTTCGCTCACGGAAGTCCAGTAGCGAGGGCTCCGGGCCAGGGTGGTCCGGG GAAATCGGGGGCCGATGGCAAGACACCTGAAGGCAGGTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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