Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|494
Gene name
LocationContig_1141:1484..3044
Strand+
Gene length (bp)1560
Transcript length (bp)1560
Coding sequence length (bp)1560
Protein length (aa) 520

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03403 PAF-AH_p_II Platelet-activating factor acetylhydrolase, isoform II 2.2E-27 79 342

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q28262|PAFA_CANLF Platelet-activating factor acetylhydrolase OS=Canis lupus familiaris GN=PLA2G7 PE=2 SV=1 79 341 3.0E-18
sp|Q22943|PAFA_CAEEL Platelet-activating factor acetylhydrolase homolog 2 OS=Caenorhabditis elegans GN=paf-2 PE=2 SV=2 83 432 5.0E-18
sp|Q28017|PAFA_BOVIN Platelet-activating factor acetylhydrolase OS=Bos taurus GN=PLA2G7 PE=2 SV=1 78 374 6.0E-18
sp|Q60963|PAFA_MOUSE Platelet-activating factor acetylhydrolase OS=Mus musculus GN=Pla2g7 PE=2 SV=2 60 374 3.0E-17
sp|P79106|PAFA2_BOVIN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Bos taurus GN=PAFAH2 PE=1 SV=1 110 325 4.0E-17
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q28262|PAFA_CANLF Platelet-activating factor acetylhydrolase OS=Canis lupus familiaris GN=PLA2G7 PE=2 SV=1 79 341 3.0E-18
sp|Q22943|PAFA_CAEEL Platelet-activating factor acetylhydrolase homolog 2 OS=Caenorhabditis elegans GN=paf-2 PE=2 SV=2 83 432 5.0E-18
sp|Q28017|PAFA_BOVIN Platelet-activating factor acetylhydrolase OS=Bos taurus GN=PLA2G7 PE=2 SV=1 78 374 6.0E-18
sp|Q60963|PAFA_MOUSE Platelet-activating factor acetylhydrolase OS=Mus musculus GN=Pla2g7 PE=2 SV=2 60 374 3.0E-17
sp|P79106|PAFA2_BOVIN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Bos taurus GN=PAFAH2 PE=1 SV=1 110 325 4.0E-17
sp|P83006|PAFA2_RAT Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Rattus norvegicus GN=Pafah2 PE=1 SV=2 79 341 5.0E-17
sp|Q8VDG7|PAFA2_MOUSE Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Mus musculus GN=Pafah2 PE=1 SV=2 79 341 8.0E-17
sp|Q99487|PAFA2_HUMAN Platelet-activating factor acetylhydrolase 2, cytoplasmic OS=Homo sapiens GN=PAFAH2 PE=1 SV=1 109 325 4.0E-16
sp|Q13093|PAFA_HUMAN Platelet-activating factor acetylhydrolase OS=Homo sapiens GN=PLA2G7 PE=1 SV=1 66 374 5.0E-15
sp|P70683|PAFA_CAVPO Platelet-activating factor acetylhydrolase OS=Cavia porcellus GN=PLA2G7 PE=2 SV=1 72 342 1.0E-14
sp|Q90678|PAFA_CHICK Platelet-activating factor acetylhydrolase OS=Gallus gallus GN=PLA2G7 PE=2 SV=1 44 371 3.0E-12
sp|Q9URV1|PLG7_SCHPO Putative phospholipase A2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=plg7 PE=3 SV=1 79 451 3.0E-10
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GO

GO Term Description Terminal node
GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity Yes
GO:0016042 lipid catabolic process Yes
GO:0052689 carboxylic ester hydrolase activity No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:1901575 organic substance catabolic process No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0006629 lipid metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0009056 catabolic process No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.5

Transmembrane Domains

Domain # Start End Length
1 52 74 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|494
MPPNETPSLELDSLDSLSDPDLDPDSPLAIRPKWMPPPPSPSGRRIFTRRRLITALASFIAFYLAVCLLRAVPPF
AHPLPPYSGQYAVASVDIEAPLPDAPRRVASVFDLESVLFTLYYPSEAAPSARHRPWLDRPIGPTARGYARLIGL
DIFPIRWLFSSVLWVLAGPVRIPAAVDAPLVASDGDRLPVIVFSHGMASSRTDYTAYIGELASRGFIVAAVEHRD
GSCPGSVIAPDRPVLALPSPAHLGSNLTRSAFKRAQMAVRTAEMLDTIHVLRALDAGRGPDILAANPRHEGLHLS
SFRDRLALKDGLALAGHSMGATAVLRAVHALPAPVPVIALDPGKESGPLSPDDAEDGLAGPLLVLHSAAWSRPSP
GLFYGRPHFDAIRDFVAASLRRSSSAWFLTGLDTAHPSISDAPLLEPMLLRLATGFRLHDPLASTRRHANLSAEF
LGLSTGHAKRSTRLPPSGSLLAESVTHPSFDHWLSERRLSFPQDWASQWEIHVSPAAAHEPGNILSNQA*
Coding >Ophun1|494
ATGCCTCCCAACGAAACCCCTTCCCTCGAACTCGACTCCCTCGACTCCCTCTCCGACCCCGACCTCGACCCCGAC
TCCCCCCTCGCCATCCGCCCGAAATGGATGCCGCCTCCCCCGTCCCCCTCCGGCCGTCGCATCTTCACCCGCCGC
CGTCTCATCACAGCCCTCGCCTCCTTCATCGCCTTCTATCTCGCCGTCTGCCTCCTCCGCGCCGTCCCGCCCTTC
GCCCATCCTCTCCCGCCCTACTCGGGTCAATATGCCGTCGCCTCCGTCGACATCGAAGCCCCCCTCCCGGACGCG
CCCCGTCGCGTAGCCTCCGTATTCGACCTCGAATCCGTCCTCTTCACCTTGTACTACCCATCTGAAGCAGCCCCG
TCAGCTCGTCATCGTCCTTGGCTCGACCGTCCCATCGGTCCGACTGCGCGGGGATACGCCCGGCTAATCGGCCTC
GACATCTTCCCCATCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTACGCATCCCCGCCGCC
GTCGACGCCCCCTTAGTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCTCACGGCATGGCCTCGTCT
CGCACCGATTACACGGCTTACATCGGCGAGCTCGCCAGCCGCGGCTTCATCGTCGCTGCAGTAGAGCACCGCGAC
GGCAGCTGTCCCGGCTCCGTCATCGCTCCCGACCGCCCCGTCCTCGCCCTCCCCAGTCCCGCTCACCTCGGATCC
AACCTGACGCGCTCCGCCTTTAAGCGCGCCCAGATGGCCGTCCGCACCGCCGAGATGCTCGACACGATCCACGTC
CTGCGCGCCCTCGACGCCGGCCGCGGCCCGGACATCCTGGCCGCCAATCCCCGTCACGAGGGCCTTCATCTATCC
TCCTTTCGCGACCGTCTCGCCCTCAAGGATGGTCTTGCCCTCGCAGGCCACTCCATGGGCGCCACCGCCGTCCTC
CGGGCCGTCCACGCCCTCCCCGCCCCGGTCCCCGTCATCGCCCTCGACCCGGGCAAGGAGAGCGGCCCTCTGTCC
CCCGATGACGCCGAAGACGGCCTCGCCGGTCCTTTGCTCGTCCTCCACTCCGCTGCCTGGTCCCGGCCCTCCCCC
GGCCTCTTCTACGGCCGTCCTCACTTCGATGCCATCCGCGACTTTGTCGCCGCTTCCCTTCGCCGCTCCTCGTCT
GCTTGGTTTCTCACCGGCCTTGATACAGCCCATCCGTCCATCTCGGACGCACCGCTTCTCGAGCCCATGCTACTG
CGACTCGCCACGGGATTTCGCCTTCATGATCCCCTCGCTTCCACCCGCAGACATGCCAATCTCTCCGCCGAGTTC
CTTGGCCTCTCTACCGGCCACGCCAAACGCTCTACCCGTCTTCCACCCTCTGGAAGCCTCCTTGCCGAGTCCGTT
ACTCATCCTTCCTTTGATCACTGGCTGAGCGAGCGCCGCCTCTCCTTTCCCCAAGACTGGGCATCTCAATGGGAG
ATCCACGTCAGCCCAGCCGCCGCCCATGAGCCCGGCAACATTCTCTCCAACCAGGCGTAG
Transcript >Ophun1|494
ATGCCTCCCAACGAAACCCCTTCCCTCGAACTCGACTCCCTCGACTCCCTCTCCGACCCCGACCTCGACCCCGAC
TCCCCCCTCGCCATCCGCCCGAAATGGATGCCGCCTCCCCCGTCCCCCTCCGGCCGTCGCATCTTCACCCGCCGC
CGTCTCATCACAGCCCTCGCCTCCTTCATCGCCTTCTATCTCGCCGTCTGCCTCCTCCGCGCCGTCCCGCCCTTC
GCCCATCCTCTCCCGCCCTACTCGGGTCAATATGCCGTCGCCTCCGTCGACATCGAAGCCCCCCTCCCGGACGCG
CCCCGTCGCGTAGCCTCCGTATTCGACCTCGAATCCGTCCTCTTCACCTTGTACTACCCATCTGAAGCAGCCCCG
TCAGCTCGTCATCGTCCTTGGCTCGACCGTCCCATCGGTCCGACTGCGCGGGGATACGCCCGGCTAATCGGCCTC
GACATCTTCCCCATCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTACGCATCCCCGCCGCC
GTCGACGCCCCCTTAGTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCTCACGGCATGGCCTCGTCT
CGCACCGATTACACGGCTTACATCGGCGAGCTCGCCAGCCGCGGCTTCATCGTCGCTGCAGTAGAGCACCGCGAC
GGCAGCTGTCCCGGCTCCGTCATCGCTCCCGACCGCCCCGTCCTCGCCCTCCCCAGTCCCGCTCACCTCGGATCC
AACCTGACGCGCTCCGCCTTTAAGCGCGCCCAGATGGCCGTCCGCACCGCCGAGATGCTCGACACGATCCACGTC
CTGCGCGCCCTCGACGCCGGCCGCGGCCCGGACATCCTGGCCGCCAATCCCCGTCACGAGGGCCTTCATCTATCC
TCCTTTCGCGACCGTCTCGCCCTCAAGGATGGTCTTGCCCTCGCAGGCCACTCCATGGGCGCCACCGCCGTCCTC
CGGGCCGTCCACGCCCTCCCCGCCCCGGTCCCCGTCATCGCCCTCGACCCGGGCAAGGAGAGCGGCCCTCTGTCC
CCCGATGACGCCGAAGACGGCCTCGCCGGTCCTTTGCTCGTCCTCCACTCCGCTGCCTGGTCCCGGCCCTCCCCC
GGCCTCTTCTACGGCCGTCCTCACTTCGATGCCATCCGCGACTTTGTCGCCGCTTCCCTTCGCCGCTCCTCGTCT
GCTTGGTTTCTCACCGGCCTTGATACAGCCCATCCGTCCATCTCGGACGCACCGCTTCTCGAGCCCATGCTACTG
CGACTCGCCACGGGATTTCGCCTTCATGATCCCCTCGCTTCCACCCGCAGACATGCCAATCTCTCCGCCGAGTTC
CTTGGCCTCTCTACCGGCCACGCCAAACGCTCTACCCGTCTTCCACCCTCTGGAAGCCTCCTTGCCGAGTCCGTT
ACTCATCCTTCCTTTGATCACTGGCTGAGCGAGCGCCGCCTCTCCTTTCCCCAAGACTGGGCATCTCAATGGGAG
ATCCACGTCAGCCCAGCCGCCGCCCATGAGCCCGGCAACATTCTCTCCAACCAGGCGTAG
Gene >Ophun1|494
ATGCCTCCCAACGAAACCCCTTCCCTCGAACTCGACTCCCTCGACTCCCTCTCCGACCCCGACCTCGACCCCGAC
TCCCCCCTCGCCATCCGCCCGAAATGGATGCCGCCTCCCCCGTCCCCCTCCGGCCGTCGCATCTTCACCCGCCGC
CGTCTCATCACAGCCCTCGCCTCCTTCATCGCCTTCTATCTCGCCGTCTGCCTCCTCCGCGCCGTCCCGCCCTTC
GCCCATCCTCTCCCGCCCTACTCGGGTCAATATGCCGTCGCCTCCGTCGACATCGAAGCCCCCCTCCCGGACGCG
CCCCGTCGCGTAGCCTCCGTATTCGACCTCGAATCCGTCCTCTTCACCTTGTACTACCCATCTGAAGCAGCCCCG
TCAGCTCGTCATCGTCCTTGGCTCGACCGTCCCATCGGTCCGACTGCGCGGGGATACGCCCGGCTAATCGGCCTC
GACATCTTCCCCATCCGCTGGCTCTTCTCCTCCGTCCTCTGGGTCCTAGCCGGCCCCGTACGCATCCCCGCCGCC
GTCGACGCCCCCTTAGTCGCCTCCGATGGCGACCGTCTCCCCGTCATCGTCTTCTCTCACGGCATGGCCTCGTCT
CGCACCGATTACACGGCTTACATCGGCGAGCTCGCCAGCCGCGGCTTCATCGTCGCTGCAGTAGAGCACCGCGAC
GGCAGCTGTCCCGGCTCCGTCATCGCTCCCGACCGCCCCGTCCTCGCCCTCCCCAGTCCCGCTCACCTCGGATCC
AACCTGACGCGCTCCGCCTTTAAGCGCGCCCAGATGGCCGTCCGCACCGCCGAGATGCTCGACACGATCCACGTC
CTGCGCGCCCTCGACGCCGGCCGCGGCCCGGACATCCTGGCCGCCAATCCCCGTCACGAGGGCCTTCATCTATCC
TCCTTTCGCGACCGTCTCGCCCTCAAGGATGGTCTTGCCCTCGCAGGCCACTCCATGGGCGCCACCGCCGTCCTC
CGGGCCGTCCACGCCCTCCCCGCCCCGGTCCCCGTCATCGCCCTCGACCCGGGCAAGGAGAGCGGCCCTCTGTCC
CCCGATGACGCCGAAGACGGCCTCGCCGGTCCTTTGCTCGTCCTCCACTCCGCTGCCTGGTCCCGGCCCTCCCCC
GGCCTCTTCTACGGCCGTCCTCACTTCGATGCCATCCGCGACTTTGTCGCCGCTTCCCTTCGCCGCTCCTCGTCT
GCTTGGTTTCTCACCGGCCTTGATACAGCCCATCCGTCCATCTCGGACGCACCGCTTCTCGAGCCCATGCTACTG
CGACTCGCCACGGGATTTCGCCTTCATGATCCCCTCGCTTCCACCCGCAGACATGCCAATCTCTCCGCCGAGTTC
CTTGGCCTCTCTACCGGCCACGCCAAACGCTCTACCCGTCTTCCACCCTCTGGAAGCCTCCTTGCCGAGTCCGTT
ACTCATCCTTCCTTTGATCACTGGCTGAGCGAGCGCCGCCTCTCCTTTCCCCAAGACTGGGCATCTCAATGGGAG
ATCCACGTCAGCCCAGCCGCCGCCCATGAGCCCGGCAACATTCTCTCCAACCAGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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