Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophun1\|4914
Gene name
Location	Contig_467:3356..4770
Strand	+
Gene length (bp)	1414
Transcript length (bp)	1359
Coding sequence length (bp)	1359
Protein length (aa)	453

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10104	Brr6_like_C_C	Di-sulfide bridge nucleocytoplasmic transport domain	1.6E-36	229	352

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53062\|BRR6_YEAST	Nucleus export protein BRR6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRR6 PE=1 SV=1	223	337	2.0E-06

GO

GO Term	Description	Terminal node
GO:0055088	lipid homeostasis	Yes
GO:0031965	nuclear membrane	Yes
GO:0065007	biological regulation	No
GO:0048878	chemical homeostasis	No
GO:0031090	organelle membrane	No
GO:0065008	regulation of biological quality	No
GO:0016020	membrane	No
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No
GO:0008150	biological_process	No
GO:0042592	homeostatic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 39	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	230	252	22
2	336	355	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophun1\|4914 MLAPEDLASAMVSATDEHHQVFRSPAVSPARPENRFANLATPSKTQQPPPQAARFTPQLPAKNMAPAFRNPAFST PRRPIDEIIFSEASGAEDSPAATEASDYPNDTPEADHRADHSGISMMPLKIDKTSRYGRPKKHAPGKGEIRARRD ASVGMRKRKRRNHDRDVGSVHHHYNGPDSDVWDSGSDSENETGARRNRSRSAQDGNPGAFESFFRALNKYPNTPD HMQRWMQFGANLFLVSVLAFLGWSVVSTVRSDIHKANDVARQELVSRMTECQTQYTMNECSKKDRPALRIMCDEW YDCMMQNPESILRVKVTAKQVAEIINEFSETMHLKAWGIVLAFILVCTTVNVGALSRQGGHRPIAPAVAPQPSSA VVDADAAKSPGIAPGYMLVPVHTPRVSRRTQLDEGTDTDTSPLNLKAALPRVTPAGRRSPSKEERFLSPVKNRAA HR*
Coding	>Ophun1\|4914 ATGCTGGCCCCTGAAGACCTGGCCTCTGCCATGGTGTCGGCGACTGACGAACATCATCAAGTCTTTAGATCTCCC GCAGTCTCTCCAGCGCGCCCTGAAAACCGATTCGCCAACCTCGCGACGCCGTCCAAGACGCAGCAGCCACCGCCT CAGGCAGCCCGCTTCACGCCCCAACTGCCTGCCAAGAACATGGCTCCGGCCTTTCGAAACCCAGCATTCTCGACG CCGAGGCGGCCAATCGACGAGATCATCTTTTCAGAGGCATCGGGCGCTGAGGACAGCCCTGCCGCGACGGAAGCG TCTGACTACCCCAACGATACGCCCGAGGCAGACCATCGAGCAGATCATAGTGGCATCTCGATGATGCCGCTCAAG ATCGACAAGACGAGCCGCTATGGAAGACCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCGCGCAGAGAT GCCTCGGTCGGCATGAGGAAGCGCAAACGGCGCAATCACGACAGAGATGTCGGCTCCGTCCATCATCACTACAAC GGTCCCGATAGCGACGTCTGGGATTCAGGCTCCGACTCGGAAAATGAGACGGGCGCGCGGCGCAATCGATCACGT TCAGCCCAAGATGGCAATCCAGGCGCGTTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACGCCGGAT CATATGCAGCGATGGATGCAGTTTGGCGCCAACTTGTTTCTCGTCTCGGTGCTAGCATTTCTCGGCTGGTCCGTC GTGAGCACCGTCCGCAGCGACATTCACAAGGCCAACGACGTGGCGCGACAAGAGCTCGTCAGCAGGATGACGGAG TGCCAGACGCAATACACGATGAACGAATGCTCCAAGAAGGACCGACCGGCCCTCCGAATTATGTGCGATGAGTGG TACGACTGCATGATGCAGAACCCCGAGTCGATTCTCAGAGTCAAGGTCACGGCGAAGCAGGTGGCGGAAATTATC AACGAATTTTCCGAGACGATGCATCTCAAGGCCTGGGGCATCGTGCTCGCATTCATCCTAGTGTGCACCACGGTC AACGTCGGGGCGCTCAGTCGACAAGGCGGGCACAGACCGATAGCTCCGGCAGTAGCTCCTCAGCCGAGTAGCGCC GTGGTGGATGCCGACGCTGCGAAATCGCCCGGCATCGCCCCCGGATACATGTTGGTTCCGGTGCATACGCCGAGA GTATCGCGTCGGACACAGCTGGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTGAAGGCGGCCCTTCCT CGCGTCACGCCTGCTGGACGCAGGAGCCCCAGCAAAGAGGAGAGGTTTCTCAGTCCGGTCAAGAACAGGGCGGCG CACCGGTAG
Transcript	>Ophun1\|4914 ATGCTGGCCCCTGAAGACCTGGCCTCTGCCATGGTGTCGGCGACTGACGAACATCATCAAGTCTTTAGATCTCCC GCAGTCTCTCCAGCGCGCCCTGAAAACCGATTCGCCAACCTCGCGACGCCGTCCAAGACGCAGCAGCCACCGCCT CAGGCAGCCCGCTTCACGCCCCAACTGCCTGCCAAGAACATGGCTCCGGCCTTTCGAAACCCAGCATTCTCGACG CCGAGGCGGCCAATCGACGAGATCATCTTTTCAGAGGCATCGGGCGCTGAGGACAGCCCTGCCGCGACGGAAGCG TCTGACTACCCCAACGATACGCCCGAGGCAGACCATCGAGCAGATCATAGTGGCATCTCGATGATGCCGCTCAAG ATCGACAAGACGAGCCGCTATGGAAGACCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCGCGCAGAGAT GCCTCGGTCGGCATGAGGAAGCGCAAACGGCGCAATCACGACAGAGATGTCGGCTCCGTCCATCATCACTACAAC GGTCCCGATAGCGACGTCTGGGATTCAGGCTCCGACTCGGAAAATGAGACGGGCGCGCGGCGCAATCGATCACGT TCAGCCCAAGATGGCAATCCAGGCGCGTTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACGCCGGAT CATATGCAGCGATGGATGCAGTTTGGCGCCAACTTGTTTCTCGTCTCGGTGCTAGCATTTCTCGGCTGGTCCGTC GTGAGCACCGTCCGCAGCGACATTCACAAGGCCAACGACGTGGCGCGACAAGAGCTCGTCAGCAGGATGACGGAG TGCCAGACGCAATACACGATGAACGAATGCTCCAAGAAGGACCGACCGGCCCTCCGAATTATGTGCGATGAGTGG TACGACTGCATGATGCAGAACCCCGAGTCGATTCTCAGAGTCAAGGTCACGGCGAAGCAGGTGGCGGAAATTATC AACGAATTTTCCGAGACGATGCATCTCAAGGCCTGGGGCATCGTGCTCGCATTCATCCTAGTGTGCACCACGGTC AACGTCGGGGCGCTCAGTCGACAAGGCGGGCACAGACCGATAGCTCCGGCAGTAGCTCCTCAGCCGAGTAGCGCC GTGGTGGATGCCGACGCTGCGAAATCGCCCGGCATCGCCCCCGGATACATGTTGGTTCCGGTGCATACGCCGAGA GTATCGCGTCGGACACAGCTGGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTGAAGGCGGCCCTTCCT CGCGTCACGCCTGCTGGACGCAGGAGCCCCAGCAAAGAGGAGAGGTTTCTCAGTCCGGTCAAGAACAGGGCGGCG CACCGGTAG
Gene	>Ophun1\|4914 ATGCTGGCCCCTGAAGACCTGGCCTCTGCCATGGTGTCGGCGACTGACGAACATCATCAAGTCTTTAGATCTCCC GCAGTCTCTCCAGCGCGCCCTGAAAACCGATTCGCCAACCTCGCGACGCCGTCCAAGACGCAGCAGCCACCGCCT CAGGCAGCCCGCTTCACGCCCCAACTGCCTGCCAAGAACATGGCTCCGGCCTTTCGAAACCCAGCATTCTCGACG CCGAGGCGGCCAATCGACGAGATCATCTTTTCAGAGGCATCGGGCGCTGAGGACAGCCCTGCCGCGACGGAAGCG TCTGACTACCCCAACGATACGCCCGAGGCAGACCATCGAGCAGATCATAGTGGCATCTCGATGATGCCGCTCAAG ATCGACAAGACGAGCCGCTATGGAAGACCCAAGAAACACGCGCCGGGAAAGGGGGAGATACGGGCGCGCAGAGAT GCCTCGGTCGGCATGAGGAAGCGCAAACGGCGCAATCACGACAGAGATGTCGGCTCCGTCCATCATCACTACAAC GGTCCCGATAGCGACGTCTGGGATTCAGGCTCCGACTCGGAAAATGAGACGGGCGCGCGGCGCAATCGATCACGT TCAGCCCAAGATGGCAATCCAGGCGCGTTCGAGTCTTTCTTCCGAGCTCTCAACAAGTACCCAAACACGCCGGAT CATATGCAGCGATGGATGCAGTTTGGCGCCAACTTGTTTCTCGTCTCGGTGCTAGCATTTCTCGGCTGGTCCGTC GTGAGCACCGTCCGCAGCGACATTCACAAGGCCAACGACGTGGCGCGACAAGAGCTCGTCAGCAGGATGACGGAG TGCCAGACGCAATACACGATGAACGAATGCTCCAAGAAGGACCGACCGGCCCTCCGAATTATGTGCGATGAGTGG TACGACTGCATGATGCAGAACCCCGAGTCGATTCTCAGAGTCAAGGTCACGGCGAAGCAGGTGGCGGAAATTATC AACGAATTTTCCGAGACGATGCATCTCAAGGCCTGGGTAAGTGATTCTCCCCTGTTGCGCGCGTAAAGACTTACC GACAATCTGCTGCCAGGGCATCGTGCTCGCATTCATCCTAGTGTGCACCACGGTCAACGTCGGGGCGCTCAGTCG ACAAGGCGGGCACAGACCGATAGCTCCGGCAGTAGCTCCTCAGCCGAGTAGCGCCGTGGTGGATGCCGACGCTGC GAAATCGCCCGGCATCGCCCCCGGATACATGTTGGTTCCGGTGCATACGCCGAGAGTATCGCGTCGGACACAGCT GGACGAGGGAACGGACACGGACACGTCGCCGCTCAACCTGAAGGCGGCCCTTCCTCGCGTCACGCCTGCTGGACG CAGGAGCCCCAGCAAAGAGGAGAGGTTTCTCAGTCCGGTCAAGAACAGGGCGGCGCACCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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