© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|490 |
| Gene name | |
| Location | Contig_114:26643..27779 |
| Strand | + |
| Gene length (bp) | 1136 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00141 | peroxidase | Peroxidase | 2.7E-29 | 97 | 309 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UR19|VPL1_PLEER | Versatile peroxidase VPL1 OS=Pleurotus eryngii GN=vpl1 PE=1 SV=1 | 85 | 347 | 2.0E-40 |
| sp|O94753|VPL2_PLEER | Versatile peroxidase VPL2 OS=Pleurotus eryngii GN=vpl2 PE=1 SV=1 | 85 | 347 | 2.0E-40 |
| sp|P11543|LIG5_PHACH | Ligninase LG5 OS=Phanerochaete chrysosporium GN=GLG5 PE=2 SV=1 | 85 | 347 | 1.0E-37 |
| sp|Q96TS6|PEM3_PHLRA | Manganese peroxidase 3 OS=Phlebia radiata GN=mnp3 PE=2 SV=1 | 85 | 348 | 1.0E-34 |
| sp|P49012|LIG2_PHACH | Ligninase LG2 OS=Phanerochaete chrysosporium GN=GLG2 PE=1 SV=1 | 85 | 347 | 3.0E-34 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UR19|VPL1_PLEER | Versatile peroxidase VPL1 OS=Pleurotus eryngii GN=vpl1 PE=1 SV=1 | 85 | 347 | 2.0E-40 |
| sp|O94753|VPL2_PLEER | Versatile peroxidase VPL2 OS=Pleurotus eryngii GN=vpl2 PE=1 SV=1 | 85 | 347 | 2.0E-40 |
| sp|P11543|LIG5_PHACH | Ligninase LG5 OS=Phanerochaete chrysosporium GN=GLG5 PE=2 SV=1 | 85 | 347 | 1.0E-37 |
| sp|Q96TS6|PEM3_PHLRA | Manganese peroxidase 3 OS=Phlebia radiata GN=mnp3 PE=2 SV=1 | 85 | 348 | 1.0E-34 |
| sp|P49012|LIG2_PHACH | Ligninase LG2 OS=Phanerochaete chrysosporium GN=GLG2 PE=1 SV=1 | 85 | 347 | 3.0E-34 |
| sp|P50622|LIG6_PHACH | Ligninase LG6 OS=Phanerochaete chrysosporium GN=GLG6 PE=2 SV=1 | 86 | 347 | 5.0E-33 |
| sp|P06181|LIG8_PHACH | Ligninase H8 OS=Phanerochaete chrysosporium GN=LPOA PE=1 SV=1 | 85 | 347 | 6.0E-33 |
| sp|P31838|LIGB_PHACH | Ligninase B OS=Phanerochaete chrysosporium GN=LIPB PE=3 SV=1 | 85 | 347 | 1.0E-31 |
| sp|P20010|LIG_PHLRA | Ligninase-3 OS=Phlebia radiata PE=3 SV=1 | 85 | 347 | 2.0E-31 |
| sp|Q70LM3|PEM2_PHLRA | Manganese peroxidase 2 OS=Phlebia radiata GN=mnp2 PE=1 SV=1 | 85 | 347 | 3.0E-31 |
| sp|P20013|LIGC_TRAVE | Ligninase C OS=Trametes versicolor PE=1 SV=2 | 85 | 347 | 5.0E-31 |
| sp|P31837|LIGA_PHACH | Ligninase A OS=Phanerochaete chrysosporium GN=LIPA PE=3 SV=1 | 85 | 347 | 7.0E-31 |
| sp|P11542|LIG4_PHACH | Ligninase H2 OS=Phanerochaete chrysosporium GN=GLG4 PE=1 SV=2 | 85 | 347 | 1.0E-30 |
| sp|Q02567|PEM1_PHACH | Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1 | 85 | 347 | 5.0E-30 |
| sp|P78733|PEM3_PHACH | Manganese peroxidase H3 OS=Phanerochaete chrysosporium PE=1 SV=2 | 85 | 347 | 5.0E-30 |
| sp|P21764|LIG3_PHACH | Ligninase LG3 OS=Phanerochaete chrysosporium GN=GLG3 PE=2 SV=1 | 86 | 347 | 1.0E-29 |
| sp|P19136|PEM4_PHACH | Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1 | 85 | 347 | 2.0E-28 |
| sp|Q9UVP6|VPS1_PLEER | Versatile peroxidase VPS1 OS=Pleurotus eryngii GN=vps1 PE=1 SV=1 | 81 | 347 | 9.0E-28 |
| sp|P28314|PER_COPCI | Peroxidase OS=Coprinopsis cinerea GN=CIP1 PE=1 SV=2 | 85 | 347 | 1.0E-26 |
| sp|P28313|PER_ARTRA | Peroxidase OS=Arthromyces ramosus PE=1 SV=3 | 85 | 347 | 2.0E-26 |
| sp|A8NK72|PER_COPC7 | Peroxidase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=CIP1 PE=3 SV=1 | 85 | 347 | 4.0E-26 |
| sp|C0IW58|LNP_TAICA | Low-redox potential peroxidase OS=Taiwanofungus camphoratus GN=LnP PE=1 SV=1 | 85 | 347 | 4.0E-17 |
| sp|Q8GY91|APX6_ARATH | Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1 | 109 | 328 | 6.0E-10 |
| sp|Q01MI9|APX3_ORYSI | Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1 | 114 | 332 | 1.0E-09 |
| sp|Q0JEQ2|APX3_ORYSJ | Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=3 SV=1 | 114 | 332 | 1.0E-09 |
| sp|A5H454|PER66_MAIZE | Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1 | 114 | 328 | 8.0E-09 |
| sp|P11965|PERX_TOBAC | Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1 | 114 | 251 | 2.0E-08 |
| sp|A2YPX3|PER2_ORYSI | Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 | 114 | 328 | 8.0E-08 |
| sp|A5H453|PER42_MAIZE | Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1 | 114 | 251 | 9.0E-08 |
| sp|Q0D3N0|PER2_ORYSJ | Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 | 114 | 328 | 9.0E-08 |
| sp|Q05431|APX1_ARATH | L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2 | 114 | 332 | 9.0E-08 |
| sp|Q9LHA7|PER31_ARATH | Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1 | 110 | 333 | 3.0E-07 |
| sp|Q9FL16|PER63_ARATH | Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1 | 110 | 333 | 4.0E-07 |
| sp|Q9FE01|APX2_ORYSJ | L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1 | 88 | 332 | 5.0E-07 |
| sp|A5H452|PER70_MAIZE | Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 | 114 | 328 | 5.0E-07 |
| sp|Q96520|PER12_ARATH | Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1 | 110 | 333 | 9.0E-07 |
| sp|Q05855|PER1_WHEAT | Peroxidase OS=Triticum aestivum PE=2 SV=1 | 114 | 251 | 1.0E-06 |
| sp|Q69SV0|APX8_ORYSJ | Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2 | 114 | 334 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0020037 | heme binding | Yes |
| GO:0006979 | response to oxidative stress | Yes |
| GO:0004601 | peroxidase activity | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0046906 | tetrapyrrole binding | No |
| GO:0003674 | molecular_function | No |
| GO:0016209 | antioxidant activity | No |
| GO:0006950 | response to stress | No |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
| GO:0008150 | biological_process | No |
| GO:0050896 | response to stimulus | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|490 MTVVAALAGITTAFPAMEELKNHLSQRQAAPELIGDLQTVADGQLSQTGQDIKAILLGSASGEDTTSSANNVPAK ESPECAQDPCCIWKHISDEMHAAFVDPDGQCNDKARASIRLGFHDAFGWSKSTNSSGGGADGSIVLAGECESRSP NLVLNDICAQMRTWHSEYQQFGVSMADLIQMGTNIATVSCPLGPRVRSFVGRKDSTQPSPRSDLPSPFDSADSLI SQFADRTFTPDNLVALLGAHSTAKQREVDPARAGEALDTTPGVMDMNFYGDLLDPNAPKQIFKLQSDINISKDPR TSKLWSEFVGEQAQLPWNAQFATAYIRMSLLGVNNMNNMTECTKVLPPFIASFKGGNSTS* |
| Coding | >Ophun1|490 ATGACCGTCGTGGCTGCTCTGGCGGGCATCACCACCGCCTTCCCAGCCATGGAGGAGTTGAAGAACCATCTCAGC CAACGACAGGCAGCGCCAGAGCTGATTGGAGATCTCCAAACAGTCGCAGACGGACAGCTCTCCCAAACGGGCCAA GACATCAAGGCCATCCTTTTGGGTTCAGCCTCTGGCGAAGACACGACCTCTTCCGCCAACAACGTCCCCGCCAAG GAATCTCCAGAGTGTGCCCAAGACCCTTGCTGTATCTGGAAGCACATCTCCGATGAAATGCACGCCGCCTTCGTC GATCCCGATGGGCAATGCAACGACAAGGCCCGAGCGAGTATCCGGCTCGGCTTCCACGATGCCTTTGGCTGGTCC AAGTCGACAAACTCATCAGGAGGCGGTGCTGATGGCTCCATCGTCTTGGCTGGCGAGTGCGAAAGCAGAAGCCCC AACCTCGTCTTGAACGACATCTGCGCCCAGATGCGTACCTGGCATAGCGAATACCAGCAGTTCGGCGTCTCCATG GCCGACCTGATACAGATGGGAACCAACATTGCCACCGTATCCTGCCCCCTGGGTCCCCGAGTCCGCTCCTTTGTC GGACGCAAGGATTCAACCCAGCCGTCTCCGCGATCCGACTTGCCTTCCCCATTCGACTCAGCCGACTCCCTCATC AGCCAGTTCGCAGACAGGACTTTTACCCCTGACAACCTCGTTGCTCTGCTCGGCGCCCATAGCACTGCGAAACAG CGAGAAGTCGACCCTGCGCGCGCTGGCGAGGCCTTGGACACGACCCCCGGCGTCATGGACATGAACTTTTACGGC GATTTGCTGGATCCCAACGCCCCGAAACAGATATTTAAGCTGCAGAGCGACATCAACATCAGCAAGGATCCGCGG ACGAGCAAACTTTGGTCCGAGTTTGTCGGCGAACAAGCGCAATTGCCCTGGAACGCGCAATTCGCCACCGCATAT ATTCGGATGAGTCTTCTGGGTGTGAACAACATGAACAACATGACCGAATGCACCAAAGTTCTGCCTCCGTTTATC GCCAGCTTCAAAGGTGGAAACTCTACGTCTTGA |
| Transcript | >Ophun1|490 ATGACCGTCGTGGCTGCTCTGGCGGGCATCACCACCGCCTTCCCAGCCATGGAGGAGTTGAAGAACCATCTCAGC CAACGACAGGCAGCGCCAGAGCTGATTGGAGATCTCCAAACAGTCGCAGACGGACAGCTCTCCCAAACGGGCCAA GACATCAAGGCCATCCTTTTGGGTTCAGCCTCTGGCGAAGACACGACCTCTTCCGCCAACAACGTCCCCGCCAAG GAATCTCCAGAGTGTGCCCAAGACCCTTGCTGTATCTGGAAGCACATCTCCGATGAAATGCACGCCGCCTTCGTC GATCCCGATGGGCAATGCAACGACAAGGCCCGAGCGAGTATCCGGCTCGGCTTCCACGATGCCTTTGGCTGGTCC AAGTCGACAAACTCATCAGGAGGCGGTGCTGATGGCTCCATCGTCTTGGCTGGCGAGTGCGAAAGCAGAAGCCCC AACCTCGTCTTGAACGACATCTGCGCCCAGATGCGTACCTGGCATAGCGAATACCAGCAGTTCGGCGTCTCCATG GCCGACCTGATACAGATGGGAACCAACATTGCCACCGTATCCTGCCCCCTGGGTCCCCGAGTCCGCTCCTTTGTC GGACGCAAGGATTCAACCCAGCCGTCTCCGCGATCCGACTTGCCTTCCCCATTCGACTCAGCCGACTCCCTCATC AGCCAGTTCGCAGACAGGACTTTTACCCCTGACAACCTCGTTGCTCTGCTCGGCGCCCATAGCACTGCGAAACAG CGAGAAGTCGACCCTGCGCGCGCTGGCGAGGCCTTGGACACGACCCCCGGCGTCATGGACATGAACTTTTACGGC GATTTGCTGGATCCCAACGCCCCGAAACAGATATTTAAGCTGCAGAGCGACATCAACATCAGCAAGGATCCGCGG ACGAGCAAACTTTGGTCCGAGTTTGTCGGCGAACAAGCGCAATTGCCCTGGAACGCGCAATTCGCCACCGCATAT ATTCGGATGAGTCTTCTGGGTGTGAACAACATGAACAACATGACCGAATGCACCAAAGTTCTGCCTCCGTTTATC GCCAGCTTCAAAGGTGGAAACTCTACGTCTTGA |
| Gene | >Ophun1|490 ATGACCGTCGTGGCTGCTCTGGCGGGCATCACCACCGCCTTCCCAGCCATGGAGGAGTTGAAGAACCATCTCAGC CAACGACAGGCAGCGCCAGAGCTGATTGGAGATCTCCAAACAGTCGCAGACGGACAGCTCTCCCAAACGGGCCAA GACATCAAGGCCATCCTTTTGGGTTCAGCCTCTGGCGAAGACACGACCTCTTCCGCCAACAACGTCCCCGCCAAG GAATCTCCAGAGTGTGCCCAAGACCCTTGCTGTATCTGGAAGCACATCTCCGATGAAATGCACGCCGCCTTCGTC GATCCCGATGGGCAATGCAACGACAAGGCCCGAGCGAGTATCCGGCTCGGCTTCCACGATGCCTTTGGCTGGTCC AAGTCGACAAACTCATCAGGAGGCGGTGCTGATGGCTCCATCGTCTTGGCTGGCGAGTGCGAAAGCAGAAGCCCC AACCTCGTCTTGAACGACATCTGCGCCCAGATGCGTACCTGGCATAGCGAATACCAGCAGTTCGGCGTCTCCATG GCCGACCTGATACAGATGGGAACCAACATTGCCACCGTATCCTGCCCCCTGGGTCCCCGAGTCCGCTCCTTTGTC GGACGCAAGGATTCAACCCAGCCGTCTCCGCGATCCGACTTGCCTTCCCCATTCGACTCAGCCGACTCCCTCATC AGCCAGTTCGCAGACAGGACTTTTACCCCTGACAACCTCGTTGCTCTGCTCGGCGCCCATAGCACTGCGAAACAG CGAGAAGTCGACCCTGCGCGCGCTGGCGAGGCCTTGGACACGACCCCCGGCGTCATGGACATGAACTTTTACGGC GATTTGCTGGATCCCAACGCCCCGAAACAGATATTTAAGCTGCAGAGCGACATCAACATCAGCAAGGATCCGCGG ACGAGCAAACTTTGGTCCGAGTTTGTCGGCGAACAAGCGCAATTGCCCTGGAACGCGGTATGTCTGCTTCTTCGT TGCTATTGCCGCGTACATACTGACTTGTGTTTTAGCAATTCGCCACCGCATATATTCGGATGAGTCTTCTGGGTG TGAACAACATGAACAACATGACCGAATGCACCAAAGTTCTGCCTCCGTTTATCGCCAGCTTCAAAGGTGGAAACT CTACGTCTTGA |