Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4847
Gene name
LocationContig_458:6274..7778
Strand-
Gene length (bp)1504
Transcript length (bp)1452
Coding sequence length (bp)1452
Protein length (aa) 484

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01494 FAD_binding_3 FAD binding domain 3.7E-23 35 428

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7Z9|COQ6_SCHPO Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=coq6 PE=3 SV=2 35 477 7.0E-116
sp|P53318|COQ6_YEAST Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COQ6 PE=1 SV=1 36 477 4.0E-97
sp|Q6DF46|COQ6_XENTR Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Xenopus tropicalis GN=coq6 PE=2 SV=1 12 476 2.0E-93
sp|F1RAX8|COQ6_DANRE Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Danio rerio GN=coq6 PE=2 SV=1 12 476 5.0E-81
sp|Q8R1S0|COQ6_MOUSE Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Mus musculus GN=Coq6 PE=1 SV=3 85 476 6.0E-80
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7Z9|COQ6_SCHPO Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=coq6 PE=3 SV=2 35 477 7.0E-116
sp|P53318|COQ6_YEAST Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COQ6 PE=1 SV=1 36 477 4.0E-97
sp|Q6DF46|COQ6_XENTR Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Xenopus tropicalis GN=coq6 PE=2 SV=1 12 476 2.0E-93
sp|F1RAX8|COQ6_DANRE Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Danio rerio GN=coq6 PE=2 SV=1 12 476 5.0E-81
sp|Q8R1S0|COQ6_MOUSE Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Mus musculus GN=Coq6 PE=1 SV=3 85 476 6.0E-80
sp|Q2KIL4|COQ6_BOVIN Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Bos taurus GN=COQ6 PE=2 SV=2 19 476 7.0E-80
sp|Q68FU7|COQ6_RAT Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Rattus norvegicus GN=Coq6 PE=2 SV=1 12 476 1.0E-79
sp|Q9Y2Z9|COQ6_HUMAN Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Homo sapiens GN=COQ6 PE=1 SV=2 1 476 5.0E-79
sp|Q9VMQ5|COQ6_DROME Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Drosophila melanogaster GN=Coq6 PE=2 SV=1 46 477 1.0E-72
sp|O01884|COQ6_CAEEL Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Caenorhabditis elegans GN=coq-6 PE=3 SV=2 25 476 4.0E-66
sp|Q54EN1|COQ6_DICDI Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Dictyostelium discoideum GN=coq6 PE=3 SV=1 15 477 5.0E-58
sp|P25535|UBII_ECOLI 2-octaprenylphenol hydroxylase OS=Escherichia coli (strain K12) GN=ubiI PE=1 SV=2 36 477 7.0E-48
sp|P72835|Y1300_SYNY3 Uncharacterized protein slr1300 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1300 PE=3 SV=1 33 477 6.0E-38
sp|P75728|UBIF_ECOLI 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase OS=Escherichia coli (strain K12) GN=ubiF PE=1 SV=1 36 458 5.0E-36
sp|P25534|UBIH_ECOLI 2-octaprenyl-6-methoxyphenol hydroxylase OS=Escherichia coli (strain K12) GN=ubiH PE=1 SV=2 37 481 5.0E-29
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GO

GO Term Description Terminal node
GO:0071949 FAD binding Yes
GO:0097159 organic cyclic compound binding No
GO:0003674 molecular_function No
GO:0000166 nucleotide binding No
GO:0050660 flavin adenine dinucleotide binding No
GO:0036094 small molecule binding No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4847
MSSRCSSLLNPRLLRRSCPSIRHRLYSTRYDGNIYDVVCVGGGPAGLSLLAALRSNPVTSRLRVALVEAQDLSKT
TSWSLPVPQFSNRCSSLTPSTVLFLESIGAWTHLRRERVQGYQEMQVWDGITDARIEFDWQPRASGKDIAYMVEN
LNLTSALLRRLHELEQVDIFDKARLESIGFGSETEDLDLTEWPVVHLADGTSLTARLLVGADGANSPVRTFAGIA
SRGWDYDRHGLVATLELEGDGWGGQSHKVAYQRFLPTGPVAMLPLPGNHATLVWSTTPERASFLKKLAPHEFVAM
VNAAFRLSTVDLTYMHSQPSGQADELAWRMQHTQVQARAVPQTVVGLQEGSVASFPLKMRHADTYIGERVALVGD
AAHSIHPLAGLGLNQGQGDVQSLAGAIEYSVAHGQDLGRQMSLESYNSERYAANHLLLGVCDKLHKLYAVDKGPL
VPLRSAGLRLVNALTPFKTFFMEQASGAGARGA*
Coding >Ophun1|4847
ATGTCGTCACGCTGCAGCTCGCTCTTGAATCCTCGTCTCCTCCGCCGAAGCTGTCCGTCCATCCGCCATCGCCTC
TATTCAACACGATACGATGGCAACATCTACGACGTAGTCTGCGTCGGAGGCGGTCCAGCCGGCCTCAGCCTCCTG
GCCGCCCTTCGGTCAAATCCAGTCACATCCCGACTGCGCGTCGCCCTCGTCGAAGCTCAAGATCTCTCCAAAACG
ACATCATGGTCACTGCCTGTCCCGCAATTCTCCAACAGATGTAGCTCCCTAACGCCTTCAACCGTCCTCTTCCTC
GAATCCATCGGGGCATGGACCCATCTCAGACGAGAGCGCGTACAGGGATACCAAGAGATGCAAGTCTGGGACGGC
ATCACTGACGCTCGCATCGAATTCGACTGGCAACCGCGCGCCTCGGGGAAGGACATCGCTTACATGGTGGAGAAT
CTGAACCTCACGTCTGCCCTGCTACGGAGATTACACGAACTGGAACAAGTCGACATCTTCGACAAAGCCAGACTC
GAGAGCATCGGCTTCGGTAGCGAAACAGAAGACCTAGATCTCACCGAGTGGCCCGTCGTCCACCTCGCAGACGGA
ACCTCCCTCACAGCCAGACTCCTCGTCGGCGCCGACGGCGCAAACAGTCCCGTCCGAACCTTTGCCGGAATCGCG
AGCCGCGGCTGGGATTACGATCGGCACGGCCTCGTCGCTACCCTCGAACTCGAAGGCGATGGTTGGGGTGGCCAG
TCTCACAAGGTCGCCTACCAGCGCTTCCTGCCAACGGGTCCCGTCGCCATGCTCCCTCTGCCCGGGAACCACGCC
ACTCTAGTATGGTCGACGACACCGGAGCGGGCTTCATTTCTCAAGAAACTGGCCCCTCACGAGTTCGTCGCCATG
GTCAATGCCGCTTTCCGCCTCAGTACCGTCGACTTGACCTACATGCACTCCCAACCATCGGGTCAAGCAGATGAG
CTGGCGTGGCGAATGCAACACACACAAGTGCAAGCCAGAGCCGTTCCACAGACAGTCGTCGGCCTACAGGAAGGC
TCCGTCGCCTCGTTCCCGCTCAAGATGCGTCACGCCGACACGTACATAGGCGAACGCGTTGCTCTCGTCGGTGAC
GCGGCCCACTCCATTCACCCGCTGGCCGGCCTGGGCCTCAACCAGGGACAAGGGGACGTCCAAAGCCTTGCTGGC
GCTATAGAATACTCGGTGGCCCACGGCCAGGACCTGGGGAGGCAAATGTCCCTCGAGAGCTACAACAGCGAGCGC
TACGCCGCGAATCACCTGCTGCTCGGCGTTTGCGACAAGCTTCACAAGCTGTATGCAGTGGACAAGGGACCTCTT
GTGCCGCTGAGATCGGCCGGACTGAGGCTCGTCAACGCTCTGACGCCTTTCAAGACGTTCTTTATGGAACAGGCT
TCTGGCGCCGGAGCTAGGGGTGCTTGA
Transcript >Ophun1|4847
ATGTCGTCACGCTGCAGCTCGCTCTTGAATCCTCGTCTCCTCCGCCGAAGCTGTCCGTCCATCCGCCATCGCCTC
TATTCAACACGATACGATGGCAACATCTACGACGTAGTCTGCGTCGGAGGCGGTCCAGCCGGCCTCAGCCTCCTG
GCCGCCCTTCGGTCAAATCCAGTCACATCCCGACTGCGCGTCGCCCTCGTCGAAGCTCAAGATCTCTCCAAAACG
ACATCATGGTCACTGCCTGTCCCGCAATTCTCCAACAGATGTAGCTCCCTAACGCCTTCAACCGTCCTCTTCCTC
GAATCCATCGGGGCATGGACCCATCTCAGACGAGAGCGCGTACAGGGATACCAAGAGATGCAAGTCTGGGACGGC
ATCACTGACGCTCGCATCGAATTCGACTGGCAACCGCGCGCCTCGGGGAAGGACATCGCTTACATGGTGGAGAAT
CTGAACCTCACGTCTGCCCTGCTACGGAGATTACACGAACTGGAACAAGTCGACATCTTCGACAAAGCCAGACTC
GAGAGCATCGGCTTCGGTAGCGAAACAGAAGACCTAGATCTCACCGAGTGGCCCGTCGTCCACCTCGCAGACGGA
ACCTCCCTCACAGCCAGACTCCTCGTCGGCGCCGACGGCGCAAACAGTCCCGTCCGAACCTTTGCCGGAATCGCG
AGCCGCGGCTGGGATTACGATCGGCACGGCCTCGTCGCTACCCTCGAACTCGAAGGCGATGGTTGGGGTGGCCAG
TCTCACAAGGTCGCCTACCAGCGCTTCCTGCCAACGGGTCCCGTCGCCATGCTCCCTCTGCCCGGGAACCACGCC
ACTCTAGTATGGTCGACGACACCGGAGCGGGCTTCATTTCTCAAGAAACTGGCCCCTCACGAGTTCGTCGCCATG
GTCAATGCCGCTTTCCGCCTCAGTACCGTCGACTTGACCTACATGCACTCCCAACCATCGGGTCAAGCAGATGAG
CTGGCGTGGCGAATGCAACACACACAAGTGCAAGCCAGAGCCGTTCCACAGACAGTCGTCGGCCTACAGGAAGGC
TCCGTCGCCTCGTTCCCGCTCAAGATGCGTCACGCCGACACGTACATAGGCGAACGCGTTGCTCTCGTCGGTGAC
GCGGCCCACTCCATTCACCCGCTGGCCGGCCTGGGCCTCAACCAGGGACAAGGGGACGTCCAAAGCCTTGCTGGC
GCTATAGAATACTCGGTGGCCCACGGCCAGGACCTGGGGAGGCAAATGTCCCTCGAGAGCTACAACAGCGAGCGC
TACGCCGCGAATCACCTGCTGCTCGGCGTTTGCGACAAGCTTCACAAGCTGTATGCAGTGGACAAGGGACCTCTT
GTGCCGCTGAGATCGGCCGGACTGAGGCTCGTCAACGCTCTGACGCCTTTCAAGACGTTCTTTATGGAACAGGCT
TCTGGCGCCGGAGCTAGGGGTGCTTGA
Gene >Ophun1|4847
ATGTCGTCACGCTGCAGCTCGCTCTTGAATCCTCGTCTCCTCCGCCGAAGCTGTCCGTCCATCCGCCATCGCCTC
TATTCAACACGATACGATGGCAACATCTACGACGTAGTCTGCGTCGGAGGCGGTCCAGCCGGCCTCAGCCTCCTG
GCCGCCCTTCGTGAGTGACGATATCTCCACGACTTCGCTTTCGACCTTCTTACAGCTGTCAGGGTCAAATCCAGT
CACATCCCGACTGCGCGTCGCCCTCGTCGAAGCTCAAGATCTCTCCAAAACGACATCATGGTCACTGCCTGTCCC
GCAATTCTCCAACAGATGTAGCTCCCTAACGCCTTCAACCGTCCTCTTCCTCGAATCCATCGGGGCATGGACCCA
TCTCAGACGAGAGCGCGTACAGGGATACCAAGAGATGCAAGTCTGGGACGGCATCACTGACGCTCGCATCGAATT
CGACTGGCAACCGCGCGCCTCGGGGAAGGACATCGCTTACATGGTGGAGAATCTGAACCTCACGTCTGCCCTGCT
ACGGAGATTACACGAACTGGAACAAGTCGACATCTTCGACAAAGCCAGACTCGAGAGCATCGGCTTCGGTAGCGA
AACAGAAGACCTAGATCTCACCGAGTGGCCCGTCGTCCACCTCGCAGACGGAACCTCCCTCACAGCCAGACTCCT
CGTCGGCGCCGACGGCGCAAACAGTCCCGTCCGAACCTTTGCCGGAATCGCGAGCCGCGGCTGGGATTACGATCG
GCACGGCCTCGTCGCTACCCTCGAACTCGAAGGCGATGGTTGGGGTGGCCAGTCTCACAAGGTCGCCTACCAGCG
CTTCCTGCCAACGGGTCCCGTCGCCATGCTCCCTCTGCCCGGGAACCACGCCACTCTAGTATGGTCGACGACACC
GGAGCGGGCTTCATTTCTCAAGAAACTGGCCCCTCACGAGTTCGTCGCCATGGTCAATGCCGCTTTCCGCCTCAG
TACCGTCGACTTGACCTACATGCACTCCCAACCATCGGGTCAAGCAGATGAGCTGGCGTGGCGAATGCAACACAC
ACAAGTGCAAGCCAGAGCCGTTCCACAGACAGTCGTCGGCCTACAGGAAGGCTCCGTCGCCTCGTTCCCGCTCAA
GATGCGTCACGCCGACACGTACATAGGCGAACGCGTTGCTCTCGTCGGTGACGCGGCCCACTCCATTCACCCGCT
GGCCGGCCTGGGCCTCAACCAGGGACAAGGGGACGTCCAAAGCCTTGCTGGCGCTATAGAATACTCGGTGGCCCA
CGGCCAGGACCTGGGGAGGCAAATGTCCCTCGAGAGCTACAACAGCGAGCGCTACGCCGCGAATCACCTGCTGCT
CGGCGTTTGCGACAAGCTTCACAAGCTGTATGCAGTGGACAAGGGACCTCTTGTGCCGCTGAGATCGGCCGGACT
GAGGCTCGTCAACGCTCTGACGCCTTTCAAGACGTTCTTTATGGAACAGGCTTCTGGCGCCGGAGCTAGGGGTGC
TTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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