© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|4833 |
| Gene name | |
| Location | Contig_455:13522..14958 |
| Strand | + |
| Gene length (bp) | 1436 |
| Transcript length (bp) | 1326 |
| Coding sequence length (bp) | 1326 |
| Protein length (aa) | 442 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07993 | NAD_binding_4 | Male sterility protein | 1.6E-31 | 21 | 302 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q960W6|FACR3_DROME | Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1 | 6 | 321 | 5.0E-24 |
| sp|Q922J9|FACR1_MOUSE | Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | 9 | 311 | 6.0E-17 |
| sp|Q8WVX9|FACR1_HUMAN | Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | 9 | 311 | 1.0E-16 |
| sp|Q66H50|FACR1_RAT | Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | 9 | 312 | 1.0E-16 |
| sp|Q7ZXF5|FACR1_XENLA | Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | 9 | 311 | 3.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q960W6|FACR3_DROME | Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster GN=CG8306 PE=2 SV=1 | 6 | 321 | 5.0E-24 |
| sp|Q922J9|FACR1_MOUSE | Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | 9 | 311 | 6.0E-17 |
| sp|Q8WVX9|FACR1_HUMAN | Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | 9 | 311 | 1.0E-16 |
| sp|Q66H50|FACR1_RAT | Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | 9 | 312 | 1.0E-16 |
| sp|Q7ZXF5|FACR1_XENLA | Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | 9 | 311 | 3.0E-16 |
| sp|Q5R834|FACR1_PONAB | Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | 9 | 311 | 4.0E-16 |
| sp|Q5ZM72|FACR1_CHICK | Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | 9 | 311 | 1.0E-15 |
| sp|A1ZAI3|FACR2_DROME | Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster GN=CG8303 PE=2 SV=2 | 9 | 310 | 2.0E-14 |
| sp|Q9XGY7|FAR_SIMCH | Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | 7 | 306 | 7.0E-13 |
| sp|Q7TNT2|FACR2_MOUSE | Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | 7 | 337 | 2.0E-12 |
| sp|Q0P5J1|FACR2_BOVIN | Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | 7 | 302 | 4.0E-12 |
| sp|Q96K12|FACR2_HUMAN | Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | 7 | 312 | 4.0E-12 |
| sp|Q0WRB0|FACR5_ARATH | Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | 12 | 314 | 2.0E-11 |
| sp|A1ZAI5|FACR1_DROME | Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | 9 | 305 | 5.0E-11 |
| sp|Q93ZB9|FACR3_ARATH | Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | 9 | 309 | 1.0E-09 |
| sp|Q39152|FACR1_ARATH | Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | 7 | 318 | 7.0E-09 |
| sp|Q1PEI6|FACR8_ARATH | Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | 12 | 300 | 6.0E-07 |
| sp|B9TSP7|FACR6_ARATH | Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | 12 | 300 | 4.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|4833 MTADPASQVQDFYRDRSVFCTGATGMLGLAYIVRLVLETPVGHVYAMARGGEKRMWQVCNEYLPREQVEALQKSG RITVFDGDITHTNLGLTDDQIETIRDKVSVVVHAASTVNLVKPLHEVADVIIYSSLAVADFVLSLRNLERFVYVS TAYASTFLRRDMEGNVIGSDAVIKEKVHQLRSIVETAEAELADIRECGTTPEFNFADYLYPYSYAKNLTERLLIS RFDKHGQSDRLLIFRPSIIGPAEKLPCPNFEIAGSTPVTTFMAAAIMTPPLRMCFASPLDDPTTATIDEVPVDMV VNRLVVHTAYSSSGPVHAASGRDARVRSETLWLQAIAMRRWWWWRPTGAWTSKDWSAAGVCKLSRLFKVCGCDFI FDQAKSEAVWARMSEGEQETWPFWPTPADEDKNHVLGRERALRLLCDKFASRTCLPAMITRFMYKV* |
| Coding | >Ophun1|4833 ATGACTGCCGATCCTGCCAGCCAAGTCCAGGACTTCTACCGGGACCGCTCCGTGTTTTGCACGGGCGCGACGGGG ATGCTGGGGCTGGCGTATATTGTGCGGTTGGTGCTGGAGACGCCGGTTGGGCATGTGTATGCCATGGCGAGAGGA GGGGAGAAGCGCATGTGGCAAGTCTGCAACGAATATCTCCCGCGAGAGCAGGTCGAGGCGCTGCAAAAGTCGGGC CGCATCACCGTCTTCGATGGCGACATCACGCACACCAACCTCGGCCTCACCGACGACCAGATCGAGACGATACGC GACAAGGTCTCCGTCGTCGTCCACGCGGCATCCACCGTCAACCTGGTCAAGCCGCTTCACGAGGTGGCCGACGTC ATCATCTACTCATCGCTGGCCGTGGCCGACTTTGTCCTCTCGCTCCGCAACCTGGAGCGCTTCGTCTACGTGTCT ACAGCCTACGCCAGCACCTTTCTGCGGCGTGACATGGAGGGCAACGTGATTGGATCCGACGCCGTCATCAAGGAG AAGGTCCATCAGCTTCGCAGCATCGTCGAGACGGCAGAGGCGGAACTGGCTGATATCCGCGAGTGTGGCACCACG CCCGAGTTCAACTTTGCCGATTACCTATACCCTTACAGCTATGCCAAGAACCTGACGGAACGGCTGCTCATCAGT CGCTTCGACAAGCATGGCCAGTCTGACCGGCTGCTCATCTTCCGGCCTTCCATCATCGGCCCGGCTGAGAAGCTG CCCTGTCCCAACTTTGAGATTGCTGGTTCGACGCCCGTGACGACTTTTATGGCTGCTGCCATCATGACGCCCCCC CTGAGGATGTGCTTCGCCTCCCCCCTCGACGATCCCACCACAGCAACCATAGACGAGGTCCCCGTCGACATGGTG GTCAACCGCCTCGTCGTCCACACAGCCTACAGCTCCTCGGGCCCCGTCCACGCCGCATCCGGCCGCGACGCCCGC GTCCGCAGCGAAACGCTCTGGCTGCAAGCCATCGCCATGCGACGCTGGTGGTGGTGGCGACCCACGGGCGCCTGG ACGAGCAAGGACTGGTCCGCCGCCGGCGTCTGCAAGCTCAGCCGTCTCTTCAAGGTCTGCGGCTGCGACTTCATC TTCGATCAGGCCAAGTCGGAGGCTGTGTGGGCGCGGATGAGCGAGGGGGAGCAGGAGACGTGGCCCTTTTGGCCG ACGCCTGCTGATGAGGACAAGAATCATGTTCTTGGGAGGGAGAGGGCGTTGAGGCTGCTTTGCGACAAGTTTGCG AGTAGGACTTGTCTGCCGGCTATGATTACTCGATTCATGTACAAGGTCTGA |
| Transcript | >Ophun1|4833 ATGACTGCCGATCCTGCCAGCCAAGTCCAGGACTTCTACCGGGACCGCTCCGTGTTTTGCACGGGCGCGACGGGG ATGCTGGGGCTGGCGTATATTGTGCGGTTGGTGCTGGAGACGCCGGTTGGGCATGTGTATGCCATGGCGAGAGGA GGGGAGAAGCGCATGTGGCAAGTCTGCAACGAATATCTCCCGCGAGAGCAGGTCGAGGCGCTGCAAAAGTCGGGC CGCATCACCGTCTTCGATGGCGACATCACGCACACCAACCTCGGCCTCACCGACGACCAGATCGAGACGATACGC GACAAGGTCTCCGTCGTCGTCCACGCGGCATCCACCGTCAACCTGGTCAAGCCGCTTCACGAGGTGGCCGACGTC ATCATCTACTCATCGCTGGCCGTGGCCGACTTTGTCCTCTCGCTCCGCAACCTGGAGCGCTTCGTCTACGTGTCT ACAGCCTACGCCAGCACCTTTCTGCGGCGTGACATGGAGGGCAACGTGATTGGATCCGACGCCGTCATCAAGGAG AAGGTCCATCAGCTTCGCAGCATCGTCGAGACGGCAGAGGCGGAACTGGCTGATATCCGCGAGTGTGGCACCACG CCCGAGTTCAACTTTGCCGATTACCTATACCCTTACAGCTATGCCAAGAACCTGACGGAACGGCTGCTCATCAGT CGCTTCGACAAGCATGGCCAGTCTGACCGGCTGCTCATCTTCCGGCCTTCCATCATCGGCCCGGCTGAGAAGCTG CCCTGTCCCAACTTTGAGATTGCTGGTTCGACGCCCGTGACGACTTTTATGGCTGCTGCCATCATGACGCCCCCC CTGAGGATGTGCTTCGCCTCCCCCCTCGACGATCCCACCACAGCAACCATAGACGAGGTCCCCGTCGACATGGTG GTCAACCGCCTCGTCGTCCACACAGCCTACAGCTCCTCGGGCCCCGTCCACGCCGCATCCGGCCGCGACGCCCGC GTCCGCAGCGAAACGCTCTGGCTGCAAGCCATCGCCATGCGACGCTGGTGGTGGTGGCGACCCACGGGCGCCTGG ACGAGCAAGGACTGGTCCGCCGCCGGCGTCTGCAAGCTCAGCCGTCTCTTCAAGGTCTGCGGCTGCGACTTCATC TTCGATCAGGCCAAGTCGGAGGCTGTGTGGGCGCGGATGAGCGAGGGGGAGCAGGAGACGTGGCCCTTTTGGCCG ACGCCTGCTGATGAGGACAAGAATCATGTTCTTGGGAGGGAGAGGGCGTTGAGGCTGCTTTGCGACAAGTTTGCG AGTAGGACTTGTCTGCCGGCTATGATTACTCGATTCATGTACAAGGTCTGA |
| Gene | >Ophun1|4833 ATGACTGCCGATCCTGCCAGCCAAGTCCAGGACTTCTACCGGGACCGCTCCGTGTTTTGCACGGGCGCGACGGGG ATGCTGGGGCTGGCGTATATTGTGCGGTTGGTGCTGGAGACGCCGGTTGGGCATGTGTATGCCATGGCGAGAGGA GGGGAGAAGTGAGTTGTCCTTGGGGGGGAGAGGGTATAAGGGAGGGAGGGAGAAGAACAGGGAGAGAGAGAGAGA GAGAGAGAGACAACAAAGACAGACGGCTGACATCAAGCTGCAGGCGCATGTGGCAAGTCTGCAACGAATATCTCC CGCGAGAGCAGGTCGAGGCGCTGCAAAAGTCGGGCCGCATCACCGTCTTCGATGGCGACATCACGCACACCAACC TCGGCCTCACCGACGACCAGATCGAGACGATACGCGACAAGGTCTCCGTCGTCGTCCACGCGGCATCCACCGTCA ACCTGGTCAAGCCGCTTCACGAGGTGGCCGACGTCATCATCTACTCATCGCTGGCCGTGGCCGACTTTGTCCTCT CGCTCCGCAACCTGGAGCGCTTCGTCTACGTGTCTACAGCCTACGCCAGCACCTTTCTGCGGCGTGACATGGAGG GCAACGTGATTGGATCCGACGCCGTCATCAAGGAGAAGGTCCATCAGCTTCGCAGCATCGTCGAGACGGCAGAGG CGGAACTGGCTGATATCCGCGAGTGTGGCACCACGCCCGAGTTCAACTTTGCCGATTACCTATACCCTTACAGCT ATGCCAAGAACCTGACGGAACGGCTGCTCATCAGTCGCTTCGACAAGCATGGCCAGTCTGACCGGCTGCTCATCT TCCGGCCTTCCATCATCGGCCCGGCTGAGAAGCTGCCCTGTCCCAACTTTGAGATTGCTGGTTCGACGCCCGTGA CGACTTTTATGGCTGCTGCCATCATGACGCCCCCCCTGAGGATGTGCTTCGCCTCCCCCCTCGACGATCCCACCA CAGCAACCATAGACGAGGTCCCCGTCGACATGGTGGTCAACCGCCTCGTCGTCCACACAGCCTACAGCTCCTCGG GCCCCGTCCACGCCGCATCCGGCCGCGACGCCCGCGTCCGCAGCGAAACGCTCTGGCTGCAAGCCATCGCCATGC GACGCTGGTGGTGGTGGCGACCCACGGGCGCCTGGACGAGCAAGGACTGGTCCGCCGCCGGCGTCTGCAAGCTCA GCCGTCTCTTCAAGGTCTGCGGCTGCGACTTCATCTTCGATCAGGCCAAGTCGGAGGCTGTGTGGGCGCGGATGA GCGAGGGGGAGCAGGAGACGTGGCCCTTTTGGCCGACGCCTGCTGATGAGGACAAGAATCATGTTCTTGGGAGGG AGAGGGCGTTGAGGCTGCTTTGCGACAAGTTTGCGAGTAGGACTTGTCTGCCGGCTATGATTACTCGATTCATGT ACAAGGTCTGA |