Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4560
Gene name
LocationContig_423:3660..4181
Strand+
Gene length (bp)521
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17667 Pkinase_fungal Fungal protein kinase 5.7E-07 59 98

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4560
MADEKITSSKSYLGNRLHRSTEPTRHQAHLQVHGFDPLPIRIYPATIHCSVEPVYPPRMMELWIFDRSGCLISGK
FSVHKKPEWFAKAVVNDAAMSLRHL*
Coding >Ophun1|4560
ATGGCCGATGAAAAGATCACATCATCCAAGTCATACCTGGGAAATCGACTTCATCGCTCAACGGAGCCAACGCGA
CATCAAGCCCATCTCCAAGTTCATGGTTTCGACCCCCTTCCAATACGAATATACCCTGCCACCATTCACTGCTCG
GTTGAGCCCGTTTACCCCCCACGCATGATGGAGCTATGGATCTTCGATCGGTCGGGTTGTTTGATCTCGGGCAAG
TTCAGTGTGCACAAGAAACCTGAGTGGTTTGCCAAGGCCGTTGTCAATGATGCGGCAATGAGCTTGCGACACCTT
TAG
Transcript >Ophun1|4560
ATGGCCGATGAAAAGATCACATCATCCAAGTCATACCTGGGAAATCGACTTCATCGCTCAACGGAGCCAACGCGA
CATCAAGCCCATCTCCAAGTTCATGGTTTCGACCCCCTTCCAATACGAATATACCCTGCCACCATTCACTGCTCG
GTTGAGCCCGTTTACCCCCCACGCATGATGGAGCTATGGATCTTCGATCGGTCGGGTTGTTTGATCTCGGGCAAG
TTCAGTGTGCACAAGAAACCTGAGTGGTTTGCCAAGGCCGTTGTCAATGATGCGGCAATGAGCTTGCGACACCTT
TAG
Gene >Ophun1|4560
ATGGCCGATGAAAAGATCACATCATCCAAGTCATACCTGGGAAATCGACTTCATCGCTCAACGGAGCCAACGCGA
CGTAAGTTGTGGCAACATGTCTCTGCCATTCACGCTGGCAACGTACATACATATCTTCACGACATTCAAACCTTT
CCGAAAACTCCTCGCCCCCCTAACATCTCCCGAGCGATGGCTCTGTCGTCCCGGGGTTCTCAAGCCTGGGATTTC
CTTTCATGCTGGCCCCTTTTGTTTGCGATTTCCAGGACCTAGCTGATTGGATCTTTATCTCTTGGGCAGATCAAG
CCCATCTCCAAGTTCATGGTTTCGACCCCCTTCCAATACGAATATACCCTGCCACCATTCACTGCTCGGTTGAGC
CCGTTTACCCCCCACGCATGATGGAGCTATGGATCTTCGATCGGTCGGGTTGTTTGATCTCGGGCAAGTTCAGTG
TGCACAAGAAACCTGAGTGGTTTGCCAAGGCCGTTGTCAATGATGCGGCAATGAGCTTGCGACACCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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