Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4545
Gene name
LocationContig_420:13840..14158
Strand+
Gene length (bp)318
Transcript length (bp)318
Coding sequence length (bp)318
Protein length (aa) 106

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.99979

Transmembrane Domains

Domain # Start End Length
1 4 23 19
2 84 103 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6352
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4105
Ophiocordyceps australis map64 (Brazil) OphauB2|2004
Ophiocordyceps camponoti-floridani Ophcf2|06895
Ophiocordyceps camponoti-rufipedis Ophun1|4545 (this protein)
Ophiocordyceps kimflemingae Ophio5|2472

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4545
MHLSPITVILLAVIFALGCASAVETQTQPPPAYVPIVTPAPDQDAILASQGYRQETFYACRTVGDKEHCGWHVPI
VRAGATAKGFGVSGVVAVVVGFVSGFVLNF*
Coding >Ophun1|4545
ATGCATCTCTCGCCCATCACAGTCATCCTCCTCGCCGTCATCTTCGCTCTGGGGTGCGCTTCAGCGGTAGAGACG
CAGACGCAGCCCCCTCCAGCATACGTCCCCATCGTCACGCCTGCGCCAGACCAGGACGCCATCCTCGCTAGCCAG
GGGTATCGCCAGGAGACCTTCTACGCCTGCAGGACGGTCGGGGATAAGGAACATTGCGGATGGCATGTGCCTATT
GTTAGGGCGGGCGCTACGGCCAAGGGATTTGGTGTGAGCGGTGTCGTCGCTGTTGTTGTTGGGTTTGTGTCTGGC
TTTGTTCTCAACTTTTGA
Transcript >Ophun1|4545
ATGCATCTCTCGCCCATCACAGTCATCCTCCTCGCCGTCATCTTCGCTCTGGGGTGCGCTTCAGCGGTAGAGACG
CAGACGCAGCCCCCTCCAGCATACGTCCCCATCGTCACGCCTGCGCCAGACCAGGACGCCATCCTCGCTAGCCAG
GGGTATCGCCAGGAGACCTTCTACGCCTGCAGGACGGTCGGGGATAAGGAACATTGCGGATGGCATGTGCCTATT
GTTAGGGCGGGCGCTACGGCCAAGGGATTTGGTGTGAGCGGTGTCGTCGCTGTTGTTGTTGGGTTTGTGTCTGGC
TTTGTTCTCAACTTTTGA
Gene >Ophun1|4545
ATGCATCTCTCGCCCATCACAGTCATCCTCCTCGCCGTCATCTTCGCTCTGGGGTGCGCTTCAGCGGTAGAGACG
CAGACGCAGCCCCCTCCAGCATACGTCCCCATCGTCACGCCTGCGCCAGACCAGGACGCCATCCTCGCTAGCCAG
GGGTATCGCCAGGAGACCTTCTACGCCTGCAGGACGGTCGGGGATAAGGAACATTGCGGATGGCATGTGCCTATT
GTTAGGGCGGGCGCTACGGCCAAGGGATTTGGTGTGAGCGGTGTCGTCGCTGTTGTTGTTGGGTTTGTGTCTGGC
TTTGTTCTCAACTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail