Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4532
Gene name
LocationContig_42:28729..29428
Strand-
Gene length (bp)699
Transcript length (bp)636
Coding sequence length (bp)636
Protein length (aa) 212

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q6DHQ1|HVCN1_DANRE Voltage-gated hydrogen channel 1 OS=Danio rerio GN=hvcn1 PE=2 SV=1 20 201 3.0E-11
sp|Q5F4C0|HVCN1_CHICK Voltage-gated hydrogen channel 1 OS=Gallus gallus GN=HVCN1 PE=2 SV=1 40 178 5.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.5

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 87 109 22
3 116 138 22
4 143 162 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4532
MPDSGTTSAPLLPSHARRSDGPSSSTPASGSDLSHRLKRMRAAAARGLSSRRKHFAIMAIVGLDVFALLVEVFIR
LIACETGQDRDPWVVITTSVLGTVGLVISCLFMVELIACLLVYGFGYLCSWFHLFDAVVIVISFVVDVGLRGVAG
SIGSLVVVLRLWRLAKLSEEVLLGASERMDLLERHLDEIERENKQLRAQLGIEAGYRSSRG*
Coding >Ophun1|4532
ATGCCCGACTCCGGCACCACCTCGGCCCCTCTCCTCCCGTCCCACGCCCGCCGCTCCGATGGGCCGTCATCCTCC
ACGCCGGCCTCGGGCTCGGATCTCAGCCACCGCCTGAAGCGAATGCGTGCCGCGGCTGCGCGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCATTGTCGGCCTCGACGTCTTCGCCCTGCTGGTCGAAGTCTTTATCCGG
CTTATTGCGTGCGAGACGGGACAGGACCGTGATCCATGGGTGGTCATCACCACTTCTGTACTCGGCACTGTCGGT
CTGGTCATCAGCTGCCTCTTCATGGTCGAGTTGATTGCTTGCTTGCTCGTCTATGGCTTCGGTTATCTCTGCTCC
TGGTTCCATTTGTTTGACGCAGTCGTCATCGTCATCAGCTTCGTCGTCGACGTCGGTTTACGCGGCGTCGCTGGC
TCTATAGGCTCCCTCGTCGTCGTCCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTTCTTTTGGGGGCA
TCTGAAAGGATGGACTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGCTCAACTC
GGAATAGAGGCCGGGTACCGTTCTAGCCGCGGTTGA
Transcript >Ophun1|4532
ATGCCCGACTCCGGCACCACCTCGGCCCCTCTCCTCCCGTCCCACGCCCGCCGCTCCGATGGGCCGTCATCCTCC
ACGCCGGCCTCGGGCTCGGATCTCAGCCACCGCCTGAAGCGAATGCGTGCCGCGGCTGCGCGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCATTGTCGGCCTCGACGTCTTCGCCCTGCTGGTCGAAGTCTTTATCCGG
CTTATTGCGTGCGAGACGGGACAGGACCGTGATCCATGGGTGGTCATCACCACTTCTGTACTCGGCACTGTCGGT
CTGGTCATCAGCTGCCTCTTCATGGTCGAGTTGATTGCTTGCTTGCTCGTCTATGGCTTCGGTTATCTCTGCTCC
TGGTTCCATTTGTTTGACGCAGTCGTCATCGTCATCAGCTTCGTCGTCGACGTCGGTTTACGCGGCGTCGCTGGC
TCTATAGGCTCCCTCGTCGTCGTCCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTTCTTTTGGGGGCA
TCTGAAAGGATGGACTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGCTCAACTC
GGAATAGAGGCCGGGTACCGTTCTAGCCGCGGTTGA
Gene >Ophun1|4532
ATGCCCGACTCCGGCACCACCTCGGCCCCTCTCCTCCCGTCCCACGCCCGCCGCTCCGATGGGCCGTCATCCTCC
ACGCCGGCCTCGGGCTCGGATCTCAGCCACCGCCTGAAGCGAATGCGTGCCGCGGCTGCGCGTGGTCTCTCATCG
CGCCGCAAGCACTTTGCCATCATGGCCATTGTCGGCCTCGACGTCTTCGCCCTGCTGGTCGAAGTCTTTATCCGG
CTTATTGCGTGCGAGACGGGACAGGACCGTGATCCATGGGTGGTCATCACCACTTCTGTACTCGGCACTGTCGGT
CTGGTCATCAGCTGCCTCTTCATGGTCGAGTTGATTGCTTGCTTGCTCGTCTATGGCTTCGGGTAATGGCCCTCG
TCTCCACTTGATATACCGCCCTGTCGTCGTGCTGACTCGAGTCTTTCAAGTTATCTCTGCTCCTGGTTCCATTTG
TTTGACGCAGTCGTCATCGTCATCAGCTTCGTCGTCGACGTCGGTTTACGCGGCGTCGCTGGCTCTATAGGCTCC
CTCGTCGTCGTCCTTCGTCTGTGGCGTCTTGCCAAGCTGTCCGAGGAAGTTCTTTTGGGGGCATCTGAAAGGATG
GACTTGTTGGAGCGTCATCTGGACGAGATTGAAAGGGAAAATAAACAGCTGAGGGCTCAACTCGGAATAGAGGCC
GGGTACCGTTCTAGCCGCGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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