Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4529
Gene name
LocationContig_42:23982..25088
Strand+
Gene length (bp)1106
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 61 203 1.0E-10
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 55 236 1.0E-10
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 61 239 2.0E-10
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 5 237 4.0E-10
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 61 248 6.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4529
MLHSLVVHIRLFLTVILAIFFFLILHDASRRGFTWTVAHKMARQTTPSALLHRRPAAHSNLPTIFHQSWMTTELP
AKFQRWSATCREAHPRWEWVIWTDDDNLRLVQRFFPSLETTYRHLPGEIYRADLSRALYIVYADLDTECLLPTEQ
LKTSYPIFFDNRLKTKALFGRMGTDPDFAHSIPNAWMASTPGHPFFLHFLQTIDDRTRDITANNKSWPSAEGLTG
PVALREAIAKYEEEKVRRGSRLKERVAQLVRDGPFDESDDENEHDHRVFLLPSSVVYPYSWWADGESVRPVCWVL
SEGFNAERCKEVLQVGQAKSISITYWSHTHTPTGHSDDNLKHIQG*
Coding >Ophun1|4529
ATGCTCCATTCGCTCGTTGTTCACATCAGGCTATTTCTGACCGTCATTCTCGCCATCTTCTTCTTCCTGATTCTC
CATGACGCCTCGCGCAGGGGCTTCACCTGGACCGTCGCCCACAAAATGGCCAGACAGACGACACCATCGGCCCTC
CTCCATCGCCGCCCAGCAGCGCACTCCAACCTCCCGACCATCTTCCATCAGAGCTGGATGACGACGGAGCTGCCA
GCCAAGTTTCAGCGCTGGAGTGCCACCTGTCGCGAGGCTCACCCGCGTTGGGAATGGGTTATCTGGACCGATGAC
GATAACTTGCGCCTTGTTCAGCGGTTCTTCCCCTCGCTCGAGACCACCTATCGTCATCTTCCCGGCGAGATCTAC
CGCGCCGATCTCAGCAGGGCTCTCTACATCGTCTATGCTGACCTCGACACCGAATGCCTGCTGCCGACGGAGCAG
CTAAAGACCTCCTATCCGATCTTTTTCGACAACCGTCTCAAGACAAAAGCCCTGTTCGGCCGCATGGGGACCGAC
CCGGACTTTGCCCACTCCATCCCCAACGCCTGGATGGCATCAACTCCGGGCCATCCCTTCTTCCTGCACTTCCTC
CAGACCATCGACGACCGGACGCGTGACATCACAGCCAATAACAAGTCGTGGCCCAGTGCTGAAGGGCTGACGGGG
CCTGTTGCCCTTCGCGAAGCCATCGCCAAGTACGAGGAGGAAAAGGTGCGTCGAGGCAGTCGATTAAAGGAGCGC
GTCGCCCAGCTTGTCAGAGACGGGCCCTTTGATGAATCCGACGACGAAAACGAGCACGATCACCGCGTCTTTCTC
CTTCCCAGCAGCGTCGTCTATCCTTATAGCTGGTGGGCTGACGGCGAGTCGGTGCGTCCGGTCTGCTGGGTTCTG
AGCGAAGGCTTCAACGCCGAGAGGTGTAAAGAAGTGCTTCAAGTTGGTCAGGCCAAGAGCATATCCATTACTTAC
TGGAGCCACACGCACACGCCAACGGGGCACAGCGACGACAACTTGAAGCATATACAGGGGTGA
Transcript >Ophun1|4529
ATGCTCCATTCGCTCGTTGTTCACATCAGGCTATTTCTGACCGTCATTCTCGCCATCTTCTTCTTCCTGATTCTC
CATGACGCCTCGCGCAGGGGCTTCACCTGGACCGTCGCCCACAAAATGGCCAGACAGACGACACCATCGGCCCTC
CTCCATCGCCGCCCAGCAGCGCACTCCAACCTCCCGACCATCTTCCATCAGAGCTGGATGACGACGGAGCTGCCA
GCCAAGTTTCAGCGCTGGAGTGCCACCTGTCGCGAGGCTCACCCGCGTTGGGAATGGGTTATCTGGACCGATGAC
GATAACTTGCGCCTTGTTCAGCGGTTCTTCCCCTCGCTCGAGACCACCTATCGTCATCTTCCCGGCGAGATCTAC
CGCGCCGATCTCAGCAGGGCTCTCTACATCGTCTATGCTGACCTCGACACCGAATGCCTGCTGCCGACGGAGCAG
CTAAAGACCTCCTATCCGATCTTTTTCGACAACCGTCTCAAGACAAAAGCCCTGTTCGGCCGCATGGGGACCGAC
CCGGACTTTGCCCACTCCATCCCCAACGCCTGGATGGCATCAACTCCGGGCCATCCCTTCTTCCTGCACTTCCTC
CAGACCATCGACGACCGGACGCGTGACATCACAGCCAATAACAAGTCGTGGCCCAGTGCTGAAGGGCTGACGGGG
CCTGTTGCCCTTCGCGAAGCCATCGCCAAGTACGAGGAGGAAAAGGTGCGTCGAGGCAGTCGATTAAAGGAGCGC
GTCGCCCAGCTTGTCAGAGACGGGCCCTTTGATGAATCCGACGACGAAAACGAGCACGATCACCGCGTCTTTCTC
CTTCCCAGCAGCGTCGTCTATCCTTATAGCTGGTGGGCTGACGGCGAGTCGGTGCGTCCGGTCTGCTGGGTTCTG
AGCGAAGGCTTCAACGCCGAGAGGTGTAAAGAAGTGCTTCAAGTTGGTCAGGCCAAGAGCATATCCATTACTTAC
TGGAGCCACACGCACACGCCAACGGGGCACAGCGACGACAACTTGAAGCATATACAGGGGTGA
Gene >Ophun1|4529
ATGCTCCATTCGCTCGTTGTTCACATCAGGCTATTTCTGACCGTCATTCTCGCCATCTTCTTCTTCCTGATTCTC
CATGACGCCTCGCGCAGGGGCTTCACCTGGACCGTCGCCCACAAAATGGCCAGACAGACGACACCATCGGCCCTC
CTCCATCGCCGCCCAGCAGCGCACTCCAACCTCCCGACCATCTTCCATCAGAGCTGGATGACGACGGAGCTGCCA
GCCAAGTTTCAGCGCTGGAGTGCCACCTGTCGCGAGGCTCACCCGCGTTGGGAATGGGTTATCTGGACCGATGAC
GATAACTTGCGCCTTGTTCAGCGGTTCTTCCCCTCGCTCGAGACCACCTATCGTCATCTTCCCGGCGAGATCTAC
CGCGCCGATCTCAGCAGGGCTCTCTACATGTACATCTATGGCGGGTGTGTTCCAGCCGTCGTCAGGCCTGGAGAC
GGCTTACTGACGCCAGATACAGCGTCTATGCTGACCTCGACACCGAATGCCTGCTGCCGACGGAGCAGCTAAAGA
CCTCCTATCCGATCTTTTTCGACAACCGTCTCAAGACAAAAGCCCTGTTCGGCCGCATGGGGACCGACCCGGACT
TTGCCCACTCCATCCCCAACGCCTGGATGGCATCAACTCCGGGCCATCCCTTCTTCCTGCACTTCCTCCAGACCA
TCGACGACCGGACGCGTGACATCACAGCCAATAACAAGTCGTGGCCCAGTGCTGAAGGGCTGACGGGGCCTGTTG
CCCTTCGCGAAGCCATCGCCAAGTACGAGGAGGAAAAGGTGCGTCGAGGCAGTCGATTAAAGGAGCGCGTCGCCC
AGCTTGTCAGAGACGGGCCCTTTGATGAATCCGACGACGAAAACGAGCACGATCACCGCGTCTTTCTCCTTCCCA
GCAGCGTCGTCTATCCTTATAGCTGGTGGGCTGACGGCGAGTCGGTGCGTCCGGTCTGCTGGGTTCTGAGCGAAG
GCTTCAACGCCGAGAGGTGTAAAGAAGTGCTTCAAGTTGGTCAGGCCAAGAGCATATCCATTACTTACTGGAGCC
ACACGCACACGCCAACGGGGCACAGCGACGACAACTTGAAGCATATACAGGGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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