Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4496
Gene name
LocationContig_416:999..2656
Strand-
Gene length (bp)1657
Transcript length (bp)1602
Coding sequence length (bp)1602
Protein length (aa) 534

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10361 DUF2434 Protein of unknown function (DUF2434) 2.9E-130 45 338

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10260|YD2C_SCHPO Uncharacterized protein C56F8.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC56F8.12 PE=4 SV=1 30 383 7.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 91 113 22
2 133 155 22
3 165 187 22
4 217 239 22
5 264 286 22
6 306 328 22
7 343 365 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4496
MAVPLNLLRARDLVAFPSGDNDTDTVLTGNHFNLTTLQHWNYTLFSNQTLSNGTRCWLTMRPYQPDYLLNNGTFV
NATKCWVAIEPIGTRGVVGITLASVYGMALVFTLAVLTKHGKLHLPKETRFYPIGRRWQWYWAAFVCCCALISLL
ANIDVDRYYIQELPIVLTGFFWFLICQGTLALTWEAVRHWGSWLERQYVDPNPFVYRQDDRRATVEFWLPLWFYL
WVWLNFFLVVPRGWGFVEKQRSVEQTQAVAIPTALDGRFKGAGFCLFIAWLTILYSLRHSIHHYKPRNRGIVNRV
VGLARVVPLRFMLILPLNLCLIAYQVLISFDWELSILRFQGMVIPVVFAWGYGPTLLIVFIQVIYGFATPNEDKE
LIRQRRVRGDDVNRELGIVKRPAWWRRVRGDHITGTLRDRIQKNVDEVGGERGVGRRVEDDAERHARLEALRSAM
NDDSGMELGKVSPRPLVGSNRLPEHIPATGSLLPGFASNPERLPYLLEGGSPPPYSDGSGRRPSDPDTEPDTSQQ
KVRSMLDV*
Coding >Ophun1|4496
ATGGCCGTTCCTCTGAACCTCCTCCGCGCTCGCGACCTCGTTGCCTTTCCGTCCGGAGACAACGATACCGATACT
GTTCTCACGGGCAACCACTTCAACCTGACGACGCTGCAGCACTGGAATTATACACTCTTCAGCAACCAGACGCTC
TCCAATGGCACTCGCTGCTGGCTCACCATGCGGCCCTACCAGCCCGACTACCTGCTCAACAACGGCACCTTTGTC
AACGCCACCAAGTGCTGGGTCGCCATCGAACCCATCGGAACCCGTGGCGTCGTCGGCATCACCCTCGCTTCGGTG
TACGGCATGGCTCTCGTCTTTACCCTCGCGGTATTGACCAAACACGGAAAACTCCATCTGCCTAAAGAGACGCGC
TTCTACCCGATCGGCCGTCGCTGGCAGTGGTACTGGGCCGCCTTTGTCTGCTGCTGTGCCCTGATAAGTCTACTG
GCCAACATCGACGTCGACCGTTACTATATCCAGGAGCTGCCCATCGTTCTCACCGGCTTCTTTTGGTTCCTCATC
TGTCAGGGCACCCTGGCCCTCACATGGGAGGCCGTCCGCCACTGGGGCAGTTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTCGTCTACCGCCAAGACGACAGACGAGCCACGGTTGAGTTTTGGTTGCCGCTATGGTTCTATCTT
TGGGTGTGGTTGAACTTCTTCCTCGTCGTTCCTCGCGGCTGGGGCTTTGTCGAGAAGCAGCGGTCCGTCGAGCAG
ACGCAAGCCGTGGCCATACCGACGGCCTTGGACGGACGCTTCAAGGGCGCCGGCTTCTGCCTCTTCATCGCCTGG
CTCACCATACTTTACTCGCTGCGACACTCGATCCACCACTACAAGCCGCGCAACCGTGGCATCGTGAACCGAGTC
GTCGGCCTCGCGCGCGTCGTACCCCTGCGCTTCATGCTCATCCTGCCCCTGAATCTGTGCCTCATCGCGTATCAG
GTGCTCATTTCCTTCGACTGGGAGCTTTCGATCCTCCGATTCCAGGGCATGGTGATTCCCGTTGTGTTTGCGTGG
GGATACGGCCCGACGCTGCTCATCGTCTTCATCCAGGTCATCTACGGATTCGCGACGCCCAACGAAGACAAGGAG
CTCATACGACAGCGCAGAGTACGGGGTGACGACGTCAACCGCGAACTGGGCATCGTCAAGCGGCCAGCCTGGTGG
CGGCGCGTGAGGGGAGACCATATTACCGGCACGCTGCGCGATAGGATCCAGAAGAACGTTGACGAAGTGGGCGGC
GAGCGCGGCGTCGGCCGTCGAGTTGAAGACGACGCAGAGCGACACGCGAGGCTCGAGGCCCTGCGATCGGCCATG
AACGACGATAGCGGCATGGAGCTGGGCAAGGTGTCGCCGAGGCCTTTGGTCGGCAGCAACCGTCTCCCGGAGCAT
ATACCGGCGACCGGCTCCTTGCTGCCCGGCTTTGCGTCGAACCCGGAGCGGCTACCGTATCTACTGGAGGGGGGT
TCGCCGCCTCCGTACAGCGACGGAAGCGGGAGGCGGCCGTCGGACCCGGACACGGAGCCGGACACGTCGCAGCAA
AAGGTGCGGAGCATGCTGGACGTGTAA
Transcript >Ophun1|4496
ATGGCCGTTCCTCTGAACCTCCTCCGCGCTCGCGACCTCGTTGCCTTTCCGTCCGGAGACAACGATACCGATACT
GTTCTCACGGGCAACCACTTCAACCTGACGACGCTGCAGCACTGGAATTATACACTCTTCAGCAACCAGACGCTC
TCCAATGGCACTCGCTGCTGGCTCACCATGCGGCCCTACCAGCCCGACTACCTGCTCAACAACGGCACCTTTGTC
AACGCCACCAAGTGCTGGGTCGCCATCGAACCCATCGGAACCCGTGGCGTCGTCGGCATCACCCTCGCTTCGGTG
TACGGCATGGCTCTCGTCTTTACCCTCGCGGTATTGACCAAACACGGAAAACTCCATCTGCCTAAAGAGACGCGC
TTCTACCCGATCGGCCGTCGCTGGCAGTGGTACTGGGCCGCCTTTGTCTGCTGCTGTGCCCTGATAAGTCTACTG
GCCAACATCGACGTCGACCGTTACTATATCCAGGAGCTGCCCATCGTTCTCACCGGCTTCTTTTGGTTCCTCATC
TGTCAGGGCACCCTGGCCCTCACATGGGAGGCCGTCCGCCACTGGGGCAGTTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTCGTCTACCGCCAAGACGACAGACGAGCCACGGTTGAGTTTTGGTTGCCGCTATGGTTCTATCTT
TGGGTGTGGTTGAACTTCTTCCTCGTCGTTCCTCGCGGCTGGGGCTTTGTCGAGAAGCAGCGGTCCGTCGAGCAG
ACGCAAGCCGTGGCCATACCGACGGCCTTGGACGGACGCTTCAAGGGCGCCGGCTTCTGCCTCTTCATCGCCTGG
CTCACCATACTTTACTCGCTGCGACACTCGATCCACCACTACAAGCCGCGCAACCGTGGCATCGTGAACCGAGTC
GTCGGCCTCGCGCGCGTCGTACCCCTGCGCTTCATGCTCATCCTGCCCCTGAATCTGTGCCTCATCGCGTATCAG
GTGCTCATTTCCTTCGACTGGGAGCTTTCGATCCTCCGATTCCAGGGCATGGTGATTCCCGTTGTGTTTGCGTGG
GGATACGGCCCGACGCTGCTCATCGTCTTCATCCAGGTCATCTACGGATTCGCGACGCCCAACGAAGACAAGGAG
CTCATACGACAGCGCAGAGTACGGGGTGACGACGTCAACCGCGAACTGGGCATCGTCAAGCGGCCAGCCTGGTGG
CGGCGCGTGAGGGGAGACCATATTACCGGCACGCTGCGCGATAGGATCCAGAAGAACGTTGACGAAGTGGGCGGC
GAGCGCGGCGTCGGCCGTCGAGTTGAAGACGACGCAGAGCGACACGCGAGGCTCGAGGCCCTGCGATCGGCCATG
AACGACGATAGCGGCATGGAGCTGGGCAAGGTGTCGCCGAGGCCTTTGGTCGGCAGCAACCGTCTCCCGGAGCAT
ATACCGGCGACCGGCTCCTTGCTGCCCGGCTTTGCGTCGAACCCGGAGCGGCTACCGTATCTACTGGAGGGGGGT
TCGCCGCCTCCGTACAGCGACGGAAGCGGGAGGCGGCCGTCGGACCCGGACACGGAGCCGGACACGTCGCAGCAA
AAGGTGCGGAGCATGCTGGACGTGTAA
Gene >Ophun1|4496
ATGGCCGTTCCTCTGAACCTCCTCCGCGCTCGCGACCTCGTTGCCTTTCCGTCCGGAGACAACGATACCGATACT
GTTCTCACGGGCAACCACTTCAACCTGACGACGCTGCAGCACTGGAATTATACACTCTTCAGCAACCAGACGCTC
TCCAATGGCACTCGCTGCTGGCTCACCATGCGGCCCTACCAGCCCGACTACCTGCTCAACAACGGCACCTTTGTC
AACGCCACCAAGTGCTGGGTCGCCATCGAACCCATCGGAACCCGTGGCGTCGTCGGCATCACCCTCGCTTCGGTG
TACGGCATGGCTCTCGTCTTTACCCTCGCGGTATTGACCAAACACGGAAAACTCCATCTGCCTAAAGAGACGCGC
TTCTACCCGATCGGCCGTCGCTGGCAGTGGTACTGGGCCGCCTTTGTCTGCTGCTGTGCCCTGATAAGTCTACTG
GCCAACATCGACGTCGACCGTTACTATATCCAGGAGCTGCCCATCGTTCTCACCGGCTTCTTTTGGTTCCTCATC
TGTCAGGGCACCCTGGCCCTCACATGGGAGGCCGTCCGCCACTGGGGCAGTTGGCTGGAGCGCCAGTACGTCGAT
CCGAACCCGTTCGTCTACCGCCAAGACGACAGACGAGCCACGGTTGAGTTTTGGTTGCCGCTATGGTTCTATCTT
TGGGTGTGGTTGGTGAGCTTTCGCCCTTGTTCTTCTCTCCCTCTAGCAACCGCTGACAAGCGGATAGAACTTCTT
CCTCGTCGTTCCTCGCGGCTGGGGCTTTGTCGAGAAGCAGCGGTCCGTCGAGCAGACGCAAGCCGTGGCCATACC
GACGGCCTTGGACGGACGCTTCAAGGGCGCCGGCTTCTGCCTCTTCATCGCCTGGCTCACCATACTTTACTCGCT
GCGACACTCGATCCACCACTACAAGCCGCGCAACCGTGGCATCGTGAACCGAGTCGTCGGCCTCGCGCGCGTCGT
ACCCCTGCGCTTCATGCTCATCCTGCCCCTGAATCTGTGCCTCATCGCGTATCAGGTGCTCATTTCCTTCGACTG
GGAGCTTTCGATCCTCCGATTCCAGGGCATGGTGATTCCCGTTGTGTTTGCGTGGGGATACGGCCCGACGCTGCT
CATCGTCTTCATCCAGGTCATCTACGGATTCGCGACGCCCAACGAAGACAAGGAGCTCATACGACAGCGCAGAGT
ACGGGGTGACGACGTCAACCGCGAACTGGGCATCGTCAAGCGGCCAGCCTGGTGGCGGCGCGTGAGGGGAGACCA
TATTACCGGCACGCTGCGCGATAGGATCCAGAAGAACGTTGACGAAGTGGGCGGCGAGCGCGGCGTCGGCCGTCG
AGTTGAAGACGACGCAGAGCGACACGCGAGGCTCGAGGCCCTGCGATCGGCCATGAACGACGATAGCGGCATGGA
GCTGGGCAAGGTGTCGCCGAGGCCTTTGGTCGGCAGCAACCGTCTCCCGGAGCATATACCGGCGACCGGCTCCTT
GCTGCCCGGCTTTGCGTCGAACCCGGAGCGGCTACCGTATCTACTGGAGGGGGGTTCGCCGCCTCCGTACAGCGA
CGGAAGCGGGAGGCGGCCGTCGGACCCGGACACGGAGCCGGACACGTCGCAGCAAAAGGTGCGGAGCATGCTGGA
CGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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