Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4475
Gene name
LocationContig_412:13664..16182
Strand+
Gene length (bp)2518
Transcript length (bp)2214
Coding sequence length (bp)2214
Protein length (aa) 738

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01131 Topoisom_bac DNA topoisomerase 6.3E-99 165 524
PF01751 Toprim Toprim domain 1.8E-15 3 149

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O60126|TOP3_SCHPO DNA topoisomerase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=top3 PE=1 SV=2 1 654 0.0E+00
sp|P13099|TOP3_YEAST DNA topoisomerase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOP3 PE=1 SV=1 1 652 0.0E+00
sp|O61660|TOP3_CAEEL DNA topoisomerase 3 OS=Caenorhabditis elegans GN=top-3 PE=2 SV=1 2 653 6.0E-169
sp|Q13472|TOP3A_HUMAN DNA topoisomerase 3-alpha OS=Homo sapiens GN=TOP3A PE=1 SV=1 2 655 3.0E-159
sp|O70157|TOP3A_MOUSE DNA topoisomerase 3-alpha OS=Mus musculus GN=Top3a PE=2 SV=1 2 646 1.0E-157
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O60126|TOP3_SCHPO DNA topoisomerase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=top3 PE=1 SV=2 1 654 0.0E+00
sp|P13099|TOP3_YEAST DNA topoisomerase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOP3 PE=1 SV=1 1 652 0.0E+00
sp|O61660|TOP3_CAEEL DNA topoisomerase 3 OS=Caenorhabditis elegans GN=top-3 PE=2 SV=1 2 653 6.0E-169
sp|Q13472|TOP3A_HUMAN DNA topoisomerase 3-alpha OS=Homo sapiens GN=TOP3A PE=1 SV=1 2 655 3.0E-159
sp|O70157|TOP3A_MOUSE DNA topoisomerase 3-alpha OS=Mus musculus GN=Top3a PE=2 SV=1 2 646 1.0E-157
sp|C7J0A2|TOP3A_ORYSJ DNA topoisomerase 3-alpha OS=Oryza sativa subsp. japonica GN=TOP3A PE=3 SV=1 1 644 7.0E-149
sp|Q9NG98|TOP3A_DROME DNA topoisomerase 3-alpha OS=Drosophila melanogaster GN=Top3alpha PE=2 SV=2 1 650 3.0E-146
sp|Q9LVP1|TOP3A_ARATH DNA topoisomerase 3-alpha OS=Arabidopsis thaliana GN=TOP3A PE=1 SV=1 3 650 2.0E-145
sp|Q8T2T7|TOP3_DICDI DNA topoisomerase 3 OS=Dictyostelium discoideum GN=top3 PE=3 SV=1 2 650 2.0E-139
sp|F4ISQ7|TOP3B_ARATH DNA topoisomerase 3-beta OS=Arabidopsis thaliana GN=At2g32000 PE=2 SV=1 1 675 2.0E-104
sp|Q9Z321|TOP3B_MOUSE DNA topoisomerase 3-beta-1 OS=Mus musculus GN=Top3b PE=1 SV=1 3 675 1.0E-103
sp|O95985|TOP3B_HUMAN DNA topoisomerase 3-beta-1 OS=Homo sapiens GN=TOP3B PE=1 SV=1 3 675 4.0E-101
sp|Q0J0S6|TOP3B_ORYSJ DNA topoisomerase 3-beta OS=Oryza sativa subsp. japonica GN=TOP3B PE=2 SV=1 3 675 3.0E-99
sp|O96651|TOP3B_DROME DNA topoisomerase 3-beta OS=Drosophila melanogaster GN=Top3beta PE=2 SV=2 3 641 1.0E-92
sp|O28469|TOP1_ARCFU DNA topoisomerase 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=topA PE=3 SV=1 58 522 2.0E-58
sp|Q9HM08|TOP1_THEAC DNA topoisomerase 1 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=topA PE=3 SV=1 4 522 1.0E-55
sp|Q9UYS8|TOP1_PYRAB DNA topoisomerase 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=topA PE=3 SV=1 3 522 1.0E-51
sp|O58356|TOP1_PYRHO DNA topoisomerase 1 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=topA PE=3 SV=1 3 522 6.0E-49
sp|O27661|TOP1_METTH DNA topoisomerase 1 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=topA PE=3 SV=1 117 522 1.0E-44
sp|Q59046|TOP1_METJA DNA topoisomerase 1 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=topA PE=3 SV=1 1 522 9.0E-42
sp|Q9YB01|TOP1_AERPE DNA topoisomerase 1 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=topA PE=3 SV=1 117 522 1.0E-29
sp|Q9X3X7|TOP1_ZYMMO DNA topoisomerase 1 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=topA PE=3 SV=3 100 524 4.0E-29
sp|Q9HZJ5|TOP1_PSEAE DNA topoisomerase 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=topA PE=3 SV=1 106 527 3.0E-28
sp|P0A2I1|TOP1_SALTY DNA topoisomerase 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=topA PE=3 SV=1 90 527 7.0E-28
sp|P0A2I2|TOP1_SALTI DNA topoisomerase 1 OS=Salmonella typhi GN=topA PE=3 SV=1 90 527 7.0E-28
sp|P06612|TOP1_ECOLI DNA topoisomerase 1 OS=Escherichia coli (strain K12) GN=topA PE=1 SV=2 98 527 2.0E-27
sp|Q5HGI2|TOP1_STAAC DNA topoisomerase 1 OS=Staphylococcus aureus (strain COL) GN=topA PE=3 SV=1 98 524 5.0E-26
sp|Q2FZ32|TOP1_STAA8 DNA topoisomerase 1 OS=Staphylococcus aureus (strain NCTC 8325) GN=topA PE=3 SV=2 98 524 5.0E-26
sp|Q2FHI8|TOP1_STAA3 DNA topoisomerase 1 OS=Staphylococcus aureus (strain USA300) GN=topA PE=3 SV=2 98 524 5.0E-26
sp|Q06AK7|TOP1_STAAU DNA topoisomerase 1 OS=Staphylococcus aureus GN=topA PE=3 SV=1 98 524 9.0E-26
sp|Q8NWZ9|TOP1_STAAW DNA topoisomerase 1 OS=Staphylococcus aureus (strain MW2) GN=topA PE=3 SV=2 98 524 1.0E-25
sp|Q6G9W3|TOP1_STAAS DNA topoisomerase 1 OS=Staphylococcus aureus (strain MSSA476) GN=topA PE=3 SV=1 98 524 1.0E-25
sp|Q6GHI5|TOP1_STAAR DNA topoisomerase 1 OS=Staphylococcus aureus (strain MRSA252) GN=topA PE=3 SV=1 98 524 1.0E-25
sp|Q7A5Y5|TOP1_STAAN DNA topoisomerase 1 OS=Staphylococcus aureus (strain N315) GN=topA PE=1 SV=1 98 524 1.0E-25
sp|Q99UM1|TOP1_STAAM DNA topoisomerase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=topA PE=3 SV=1 98 524 1.0E-25
sp|Q4L5V2|TOP1_STAHJ DNA topoisomerase 1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=topA PE=3 SV=1 98 524 1.0E-25
sp|P34184|TOP1_BACPE DNA topoisomerase 1 OS=Bacillus pseudofirmus (strain OF4) GN=topA PE=3 SV=3 5 522 5.0E-25
sp|P34185|TOP1_SYNE7 DNA topoisomerase 1 OS=Synechococcus elongatus (strain PCC 7942) GN=topA PE=3 SV=2 30 525 6.0E-25
sp|Q2YXL8|TOP1_STAAB DNA topoisomerase 1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=topA PE=3 SV=2 98 524 7.0E-25
sp|Q9PLZ2|TOP1_CAMJE DNA topoisomerase 1 OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) GN=topA PE=3 SV=1 79 524 2.0E-24
sp|P46799|TOP1_THEMA DNA topoisomerase 1 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=topA PE=1 SV=1 79 525 2.0E-24
sp|Q49X35|TOP1_STAS1 DNA topoisomerase 1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=topA PE=3 SV=1 98 522 5.0E-24
sp|Q8CSU3|TOP1_STAES DNA topoisomerase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=topA PE=3 SV=1 98 524 3.0E-23
sp|Q5HPU2|TOP1_STAEQ DNA topoisomerase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=topA PE=3 SV=1 98 524 3.0E-23
sp|Q65N90|TOP3_BACLD DNA topoisomerase 3 OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=topB PE=3 SV=2 2 516 1.0E-22
sp|Q9KRB2|TOP1_VIBCH DNA topoisomerase 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=topA PE=3 SV=1 98 527 1.0E-22
sp|P57371|TOP1_BUCAI DNA topoisomerase 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=topA PE=3 SV=1 100 524 1.0E-22
sp|P73810|TOP1_SYNY3 DNA topoisomerase 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=topA PE=3 SV=1 91 528 1.0E-22
sp|P43012|TOP1_HAEIN DNA topoisomerase 1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=topA PE=3 SV=1 90 527 2.0E-22
sp|Q9ZDK2|TOP1_RICPR DNA topoisomerase 1 OS=Rickettsia prowazekii (strain Madrid E) GN=topA PE=3 SV=1 90 524 3.0E-22
sp|Q87AQ6|TOP1_XYLFT DNA topoisomerase 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=topA PE=3 SV=1 79 522 2.0E-21
sp|Q68X45|TOP1_RICTY DNA topoisomerase 1 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=topA PE=3 SV=1 90 524 2.0E-21
sp|Q5WAX6|TOP3_BACSK DNA topoisomerase 3 OS=Bacillus clausii (strain KSM-K16) GN=topB PE=3 SV=1 112 522 2.0E-21
sp|P96583|TOP3_BACSU DNA topoisomerase 3 OS=Bacillus subtilis (strain 168) GN=topB PE=3 SV=1 2 516 4.0E-21
sp|P55991|TOP1_HELPY DNA topoisomerase 1 OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=topA PE=1 SV=1 80 524 4.0E-21
sp|Q5UQB5|TOP1P_MIMIV DNA topoisomerase 1 type prokaryotic OS=Acanthamoeba polyphaga mimivirus GN=TOP1P PE=1 SV=1 98 526 5.0E-21
sp|Q9CG80|TOP1_LACLA DNA topoisomerase 1 OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=topA PE=3 SV=1 116 522 5.0E-21
sp|O83409|TOP1_TREPA DNA topoisomerase 1 OS=Treponema pallidum (strain Nichols) GN=topA PE=3 SV=1 87 527 9.0E-21
sp|P9WG49|TOP1_MYCTU DNA topoisomerase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=topA PE=1 SV=1 112 522 1.0E-20
sp|P9WG48|TOP1_MYCTO DNA topoisomerase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=topA PE=3 SV=1 112 522 1.0E-20
sp|P0A621|TOP1_MYCBO DNA topoisomerase 1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=topA PE=3 SV=1 112 522 1.0E-20
sp|Q9PEV8|TOP1_XYLFA DNA topoisomerase 1 OS=Xylella fastidiosa (strain 9a5c) GN=topA PE=3 SV=1 79 522 2.0E-20
sp|Q92IH1|TOP1_RICCN DNA topoisomerase 1 OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=topA PE=3 SV=1 79 524 2.0E-20
sp|Q4UM42|TOP1_RICFE DNA topoisomerase 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=topA PE=3 SV=1 79 524 3.0E-20
sp|Q9CN30|TOP1_PASMU DNA topoisomerase 1 OS=Pasteurella multocida (strain Pm70) GN=topA PE=3 SV=1 98 527 3.0E-20
sp|Q9ZMV7|TOP1_HELPJ DNA topoisomerase 1 OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=topA PE=3 SV=1 80 524 1.0E-19
sp|P39814|TOP1_BACSU DNA topoisomerase 1 OS=Bacillus subtilis (strain 168) GN=topA PE=3 SV=1 144 527 1.0E-19
sp|O69548|TOP1_MYCLE DNA topoisomerase 1 OS=Mycobacterium leprae (strain TN) GN=topA PE=3 SV=1 112 522 2.0E-19
sp|O73954|TOP1_PYRFU DNA topoisomerase 1 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=topA PE=3 SV=2 3 333 2.0E-19
sp|Q63GK5|TOP3_BACCZ DNA topoisomerase 3 OS=Bacillus cereus (strain ZK / E33L) GN=topB PE=3 SV=1 2 516 2.0E-19
sp|O66893|TOP1_AQUAE DNA topoisomerase 1 OS=Aquifex aeolicus (strain VF5) GN=topA PE=3 SV=1 95 528 3.0E-19
sp|Q1RIM1|TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) GN=topA PE=3 SV=1 90 524 3.0E-19
sp|Q73E74|TOP3_BACC1 DNA topoisomerase 3 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=topB PE=3 SV=1 2 516 3.0E-19
sp|Q6HP19|TOP3_BACHK DNA topoisomerase 3 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=topB PE=3 SV=1 2 516 5.0E-19
sp|Q81Z97|TOP3_BACAN DNA topoisomerase 3 OS=Bacillus anthracis GN=topB PE=3 SV=1 2 516 5.0E-19
sp|A0R979|TOP3_BACAH DNA topoisomerase 3 OS=Bacillus thuringiensis (strain Al Hakam) GN=topB PE=3 SV=1 2 516 5.0E-19
sp|Q9X909|TOP1_STRCO DNA topoisomerase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=topA PE=3 SV=1 91 522 1.0E-18
sp|P40687|TOP3_SALTY DNA topoisomerase 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=topB PE=3 SV=2 4 522 1.0E-18
sp|Q81IH1|TOP3_BACCR DNA topoisomerase 3 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) GN=topB PE=3 SV=1 2 516 2.0E-18
sp|P14294|TOP3_ECOLI DNA topoisomerase 3 OS=Escherichia coli (strain K12) GN=topB PE=1 SV=1 4 522 2.0E-18
sp|Q9KA23|TOP1_BACHD DNA topoisomerase 1 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=topA PE=3 SV=1 98 527 2.0E-18
sp|P95479|RGYR_PYRFU Reverse gyrase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rgy PE=3 SV=2 93 522 3.0E-18
sp|Q9YC75|RGYR2_AERPE Reverse gyrase 2 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rgy2 PE=3 SV=2 94 526 3.0E-18
sp|O73954|TOP1_PYRFU DNA topoisomerase 1 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=topA PE=3 SV=2 329 522 7.0E-18
sp|Q4L8B8|TOP3_STAHJ DNA topoisomerase 3 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=topB PE=3 SV=1 1 516 1.0E-17
sp|P0C2W6|TOP3_STAAB Putative DNA topoisomerase 3 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=topB PE=5 SV=1 1 516 1.0E-17
sp|Q8Z6F5|TOP3_SALTI DNA topoisomerase 3 OS=Salmonella typhi GN=topB PE=3 SV=1 4 522 2.0E-17
sp|Q6GEH9|TOP3_STAAR DNA topoisomerase 3 OS=Staphylococcus aureus (strain MRSA252) GN=topB PE=3 SV=1 1 516 3.0E-17
sp|Q7A075|TOP3_STAAW DNA topoisomerase 3 OS=Staphylococcus aureus (strain MW2) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q6G767|TOP3_STAAS DNA topoisomerase 3 OS=Staphylococcus aureus (strain MSSA476) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q7A455|TOP3_STAAN DNA topoisomerase 3 OS=Staphylococcus aureus (strain N315) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q99S17|TOP3_STAAM DNA topoisomerase 3 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q5HDV4|TOP3_STAAC DNA topoisomerase 3 OS=Staphylococcus aureus (strain COL) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q2FEN5|TOP3_STAA3 DNA topoisomerase 3 OS=Staphylococcus aureus (strain USA300) GN=topB PE=3 SV=1 1 516 5.0E-17
sp|Q2FW03|TOP3_STAA8 DNA topoisomerase 3 OS=Staphylococcus aureus (strain NCTC 8325) GN=topB PE=3 SV=1 1 516 6.0E-17
sp|Q49ZH2|TOP3_STAS1 DNA topoisomerase 3 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=topB PE=3 SV=1 1 516 9.0E-17
sp|Q9UZ86|RGYR_PYRAB Reverse gyrase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rgy PE=3 SV=1 93 522 1.0E-16
sp|Q8K9P7|TOP1_BUCAP DNA topoisomerase 1 OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=topA PE=3 SV=1 100 524 1.0E-15
sp|P78032|TOP1_MYCPN DNA topoisomerase 1 OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=topA PE=3 SV=1 98 524 2.0E-15
sp|Q9YCB6|RGYR1_AERPE Reverse gyrase 1 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rgy1 PE=3 SV=2 89 533 7.0E-15
sp|Q9PHK2|TOP1P_XYLFA DNA topoisomerase I, plasmid OS=Xylella fastidiosa (strain 9a5c) GN=XF_a0003 PE=3 SV=1 100 522 2.0E-14
sp|Q9CP53|TOP3_PASMU DNA topoisomerase 3 OS=Pasteurella multocida (strain Pm70) GN=topB PE=3 SV=1 4 522 8.0E-14
sp|P47368|TOP1_MYCGE DNA topoisomerase 1 OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=topA PE=3 SV=1 98 527 8.0E-14
sp|Q9JN65|TOP1_MYCGA DNA topoisomerase 1 OS=Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) GN=topA PE=3 SV=2 94 526 2.0E-13
sp|P43704|TOP3_HAEIN DNA topoisomerase 3 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=topB PE=3 SV=1 4 522 5.0E-13
sp|P40114|TOP1_BACAN DNA topoisomerase 1 OS=Bacillus anthracis GN=topX PE=3 SV=2 60 524 3.0E-12
sp|Q8CRF7|TOP3_STAES DNA topoisomerase 3 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=topB PE=3 SV=1 1 516 4.0E-12
sp|Q5HLZ4|TOP3_STAEQ DNA topoisomerase 3 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=topB PE=3 SV=1 1 516 4.0E-12
sp|O34204|TOP1_FERIS DNA topoisomerase 1 OS=Fervidobacterium islandicum GN=topA PE=3 SV=1 147 523 8.0E-12
sp|Q9KQF5|TOP3_VIBCH DNA topoisomerase 3 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=topB PE=3 SV=1 1 510 6.0E-11
sp|O67037|RGYR1_AQUAE Reverse gyrase 1 OS=Aquifex aeolicus (strain VF5) GN=rgy1 PE=3 SV=1 88 522 7.0E-11
sp|Q8ZXT5|RGYR_PYRAE Reverse gyrase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rgy PE=3 SV=1 112 529 5.0E-10
sp|Q97ZZ8|RGYR1_SULSO Reverse gyrase 1 OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rgy1 PE=3 SV=1 112 337 2.0E-09
sp|Q08582|RGYR_SULAC Reverse gyrase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rgy PE=1 SV=3 87 522 3.0E-09
sp|O51768|TOP1_BORBU DNA topoisomerase 1 OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=topA PE=3 SV=1 57 521 4.0E-08
sp|O58530|RGYR_PYRHO Reverse gyrase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rgy PE=3 SV=1 93 354 2.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0006265 DNA topological change Yes
GO:0003916 DNA topoisomerase activity Yes
GO:0003677 DNA binding Yes
GO:0044238 primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0071103 DNA conformation change No
GO:0003824 catalytic activity No
GO:0009987 cellular process No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0008152 metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0044260 cellular macromolecule metabolic process No
GO:0006259 DNA metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0071840 cellular component organization or biogenesis No
GO:0006807 nitrogen compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0016853 isomerase activity No
GO:0051276 chromosome organization No
GO:0003674 molecular_function No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0140097 catalytic activity, acting on DNA No
GO:0005488 binding No
GO:0003676 nucleic acid binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0006996 organelle organization No
GO:0016043 cellular component organization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4475
MRVLCVAEKPSISKAVAGHMSGGRLQTHGTRNRFVKNYSFDFDFAQAWGQCEVTMTCVSGHLTTVDFPGEYRNWS
HPPPETLFAAPIVTDIHHDSKTIAKNIQDQARYSRLLVIWTDCDLEGEHIGQEIVDAARQGNAAIQVKRARFSNV
ERAHVLSAARRLADLDEKKVNAVRARIELDLRIGCAFTRFLCNSLRSLGGPMEKLTLSYGSCQFPTLGFVVDRYF
RVKNFVPEPFWSIKLTHTKEGKTAVFSWARNRLFDRTTTVILYERCLAAKKAVVTRVQEKPTRKFKPLPLTTVEL
QKAATRLLRMNSQRAMIIAEGLYNKGFISYPRTETDRFDKGINLRALVQKQTPSQAWGNFAQGLVDGAFQQPRAG
RHDDKAHPPIHPIAYAAPTVLSAEEAPLYEYVVRRFLACCADDAKGMATDIDVEYGDENFHARGVVVLERNYLDV
YVYERWDNTAELPRLSRGEQFEPTEAMMTEGKTSPPNYLTEADLIALMDANGIGTDATMADHIQKIQDREYVAVI
DRARSGAGGDEDENGDGPGAREEAPAGRGRGSGRGRRGGRGGAASTGRRGGQKVFVPTQLGVALILGFDRMNFET
SLGKPFLRKEMELKMKAICEGNTTRDIVLRESISQYRHVFFQSQEKLGVLRQTAAAGHMMKGRHKSLSVSGKTAR
DQTVADSEARDRDGFAARTRLSARGGRIRTQRRALDRYGRPGQLGSGAAEIGRATACRMGLI*
Coding >Ophun1|4475
ATGAGGGTTCTGTGCGTGGCCGAGAAGCCGTCCATCTCCAAGGCTGTTGCCGGTCACATGTCCGGCGGAAGACTC
CAGACGCATGGCACGCGCAATCGCTTCGTCAAGAATTACTCTTTCGACTTTGATTTTGCGCAGGCTTGGGGGCAG
TGTGAGGTGACGATGACTTGCGTCTCTGGCCATCTTACAACCGTCGACTTTCCGGGTGAGTATCGCAATTGGAGT
CATCCTCCTCCGGAGACGCTCTTTGCGGCGCCCATCGTCACCGATATTCACCATGATAGCAAGACCATTGCCAAG
AATATCCAGGACCAGGCGAGGTATTCGCGGCTGCTGGTGATATGGACCGACTGCGATCTCGAAGGAGAGCACATT
GGCCAGGAGATTGTCGACGCTGCTCGTCAAGGGAACGCTGCCATCCAAGTCAAGCGTGCCAGGTTCAGCAACGTG
GAGCGAGCTCATGTCCTCTCGGCTGCTAGGCGACTGGCCGACCTCGACGAGAAAAAGGTCAATGCCGTCAGGGCT
AGGATTGAGCTGGATCTGCGCATCGGATGTGCCTTTACCAGGTTCCTCTGCAATAGTCTTCGGTCGCTGGGCGGG
CCCATGGAGAAGCTCACGCTGAGCTACGGATCGTGCCAGTTTCCTACGCTTGGCTTCGTGGTCGATCGATATTTC
CGCGTCAAGAACTTTGTGCCCGAGCCCTTTTGGAGCATCAAGCTCACGCATACAAAGGAGGGTAAGACGGCCGTC
TTCAGCTGGGCGAGGAACCGTCTCTTCGATCGCACCACGACCGTCATTCTCTACGAGCGATGTCTTGCCGCCAAA
AAGGCAGTGGTGACGAGGGTTCAGGAGAAGCCGACGCGCAAGTTTAAGCCCTTGCCGCTCACGACGGTCGAGCTG
CAAAAGGCGGCCACTCGCCTGCTTCGCATGAACAGCCAGCGTGCCATGATCATCGCCGAGGGGCTCTATAACAAG
GGCTTCATCAGCTATCCCCGTACCGAGACGGATCGCTTCGACAAGGGCATCAACCTCAGGGCCCTGGTGCAGAAA
CAGACGCCAAGTCAAGCATGGGGCAACTTTGCTCAGGGCCTGGTTGATGGCGCCTTTCAGCAGCCTCGAGCAGGT
AGACACGATGACAAGGCGCACCCTCCGATTCATCCCATTGCCTACGCGGCTCCGACGGTGCTCAGCGCCGAGGAG
GCGCCATTGTACGAGTACGTCGTTCGTCGCTTTCTTGCCTGCTGCGCAGACGACGCCAAAGGTATGGCGACGGAT
ATAGATGTCGAGTACGGGGATGAAAACTTTCATGCCCGCGGCGTTGTCGTCCTGGAGAGGAATTATCTGGATGTC
TATGTATATGAGAGGTGGGATAACACGGCTGAGCTTCCCAGACTATCAAGGGGTGAGCAGTTTGAGCCGACGGAA
GCCATGATGACGGAAGGCAAGACGTCGCCGCCGAATTACCTGACGGAGGCGGACTTGATTGCGCTGATGGACGCA
AACGGCATCGGGACCGACGCCACCATGGCCGATCACATACAAAAGATTCAGGACCGAGAGTACGTGGCCGTCATA
GACAGGGCCAGAAGCGGCGCGGGAGGCGATGAGGACGAGAACGGAGACGGCCCGGGGGCCCGAGAGGAGGCTCCC
GCCGGCCGTGGACGAGGAAGCGGGCGGGGCCGGCGAGGCGGACGGGGAGGCGCGGCATCGACCGGGAGGAGAGGC
GGCCAAAAGGTCTTTGTGCCGACTCAGCTCGGAGTGGCACTGATCCTGGGCTTCGATCGCATGAACTTTGAGACG
AGTCTGGGGAAGCCGTTCCTACGCAAAGAGATGGAGCTCAAGATGAAGGCCATCTGCGAGGGCAACACGACCAGG
GACATTGTGCTGCGGGAGAGCATCTCTCAGTACAGGCATGTCTTTTTCCAGTCGCAAGAGAAGCTCGGGGTGCTC
CGTCAGACAGCAGCCGCCGGACATATGATGAAGGGCCGGCACAAGTCGTTATCCGTCAGCGGTAAGACGGCCCGA
GACCAGACGGTGGCCGACAGCGAGGCGCGCGACAGAGACGGGTTTGCGGCCCGCACGCGGCTCTCAGCACGAGGC
GGTCGGATCCGCACGCAGCGACGAGCCCTAGACCGATACGGAAGGCCAGGTCAGCTCGGGTCCGGGGCGGCCGAG
ATCGGGCGGGCGACGGCGTGCAGGATGGGCCTGATATGA
Transcript >Ophun1|4475
ATGAGGGTTCTGTGCGTGGCCGAGAAGCCGTCCATCTCCAAGGCTGTTGCCGGTCACATGTCCGGCGGAAGACTC
CAGACGCATGGCACGCGCAATCGCTTCGTCAAGAATTACTCTTTCGACTTTGATTTTGCGCAGGCTTGGGGGCAG
TGTGAGGTGACGATGACTTGCGTCTCTGGCCATCTTACAACCGTCGACTTTCCGGGTGAGTATCGCAATTGGAGT
CATCCTCCTCCGGAGACGCTCTTTGCGGCGCCCATCGTCACCGATATTCACCATGATAGCAAGACCATTGCCAAG
AATATCCAGGACCAGGCGAGGTATTCGCGGCTGCTGGTGATATGGACCGACTGCGATCTCGAAGGAGAGCACATT
GGCCAGGAGATTGTCGACGCTGCTCGTCAAGGGAACGCTGCCATCCAAGTCAAGCGTGCCAGGTTCAGCAACGTG
GAGCGAGCTCATGTCCTCTCGGCTGCTAGGCGACTGGCCGACCTCGACGAGAAAAAGGTCAATGCCGTCAGGGCT
AGGATTGAGCTGGATCTGCGCATCGGATGTGCCTTTACCAGGTTCCTCTGCAATAGTCTTCGGTCGCTGGGCGGG
CCCATGGAGAAGCTCACGCTGAGCTACGGATCGTGCCAGTTTCCTACGCTTGGCTTCGTGGTCGATCGATATTTC
CGCGTCAAGAACTTTGTGCCCGAGCCCTTTTGGAGCATCAAGCTCACGCATACAAAGGAGGGTAAGACGGCCGTC
TTCAGCTGGGCGAGGAACCGTCTCTTCGATCGCACCACGACCGTCATTCTCTACGAGCGATGTCTTGCCGCCAAA
AAGGCAGTGGTGACGAGGGTTCAGGAGAAGCCGACGCGCAAGTTTAAGCCCTTGCCGCTCACGACGGTCGAGCTG
CAAAAGGCGGCCACTCGCCTGCTTCGCATGAACAGCCAGCGTGCCATGATCATCGCCGAGGGGCTCTATAACAAG
GGCTTCATCAGCTATCCCCGTACCGAGACGGATCGCTTCGACAAGGGCATCAACCTCAGGGCCCTGGTGCAGAAA
CAGACGCCAAGTCAAGCATGGGGCAACTTTGCTCAGGGCCTGGTTGATGGCGCCTTTCAGCAGCCTCGAGCAGGT
AGACACGATGACAAGGCGCACCCTCCGATTCATCCCATTGCCTACGCGGCTCCGACGGTGCTCAGCGCCGAGGAG
GCGCCATTGTACGAGTACGTCGTTCGTCGCTTTCTTGCCTGCTGCGCAGACGACGCCAAAGGTATGGCGACGGAT
ATAGATGTCGAGTACGGGGATGAAAACTTTCATGCCCGCGGCGTTGTCGTCCTGGAGAGGAATTATCTGGATGTC
TATGTATATGAGAGGTGGGATAACACGGCTGAGCTTCCCAGACTATCAAGGGGTGAGCAGTTTGAGCCGACGGAA
GCCATGATGACGGAAGGCAAGACGTCGCCGCCGAATTACCTGACGGAGGCGGACTTGATTGCGCTGATGGACGCA
AACGGCATCGGGACCGACGCCACCATGGCCGATCACATACAAAAGATTCAGGACCGAGAGTACGTGGCCGTCATA
GACAGGGCCAGAAGCGGCGCGGGAGGCGATGAGGACGAGAACGGAGACGGCCCGGGGGCCCGAGAGGAGGCTCCC
GCCGGCCGTGGACGAGGAAGCGGGCGGGGCCGGCGAGGCGGACGGGGAGGCGCGGCATCGACCGGGAGGAGAGGC
GGCCAAAAGGTCTTTGTGCCGACTCAGCTCGGAGTGGCACTGATCCTGGGCTTCGATCGCATGAACTTTGAGACG
AGTCTGGGGAAGCCGTTCCTACGCAAAGAGATGGAGCTCAAGATGAAGGCCATCTGCGAGGGCAACACGACCAGG
GACATTGTGCTGCGGGAGAGCATCTCTCAGTACAGGCATGTCTTTTTCCAGTCGCAAGAGAAGCTCGGGGTGCTC
CGTCAGACAGCAGCCGCCGGACATATGATGAAGGGCCGGCACAAGTCGTTATCCGTCAGCGGTAAGACGGCCCGA
GACCAGACGGTGGCCGACAGCGAGGCGCGCGACAGAGACGGGTTTGCGGCCCGCACGCGGCTCTCAGCACGAGGC
GGTCGGATCCGCACGCAGCGACGAGCCCTAGACCGATACGGAAGGCCAGGTCAGCTCGGGTCCGGGGCGGCCGAG
ATCGGGCGGGCGACGGCGTGCAGGATGGGCCTGATATGA
Gene >Ophun1|4475
ATGAGGGTTCTGTGCGTGGCCGAGAAGCCGTCCATCTCCAAGGCTGTTGCCGGTCACATGTCCGGCGGAAGACTC
CAGACGGTACGTGTGGAGGAGAAGGATGGCGAGGGAGATTGAGAGCTGATGGGATTTTCTGGGGGGGGGGGAGCA
GCATGGCACGCGCAATCGCTTCGTCAAGAATTACTCTTTCGACTTTGATTTTGCGCAGGCTTGGGGGCAGTGTGA
GGTGACGATGACTTGCGTCTCTGGCCATCTTACAACCGTCGACTTTCCGGGTGAGTATCGCAATTGGAGTCATCC
TCCTCCGGAGACGCTCTTTGCGGCGCCCATCGTCACCGATATTCACCATGTGAGTTTTCCGTGCGTCAGACGAGC
TTCTATTACACATTCTGAGTCTACTCGACAGGATAGCAAGACCATTGCCAAGAATATCCAGGACCAGGCGAGGTA
TTCGCGGCTGCTGGTGATATGGACCGACTGCGATCTCGAAGGAGAGCACATTGGCCAGGAGATTGTCGACGCTGC
TCGTCAAGGGAACGCTGCCATCCAAGTCAAGCGTGCCAGGTTCAGCAACGTGGAGCGAGCGTATGTCGACTGAAG
CCCCGTGTCGTCTGCCATCACGACTAACTCTCTAGTCATGTCCTCTCGGCTGCTAGGCGACTGGCCGACCTCGAC
GAGAAAAAGGTCAATGCCGTCAGGGCTAGGATTGAGCTGGATCTGCGCATCGGATGTGCCTTTACCAGGTTCCTC
TGCAATAGTCTTCGGTCGCTGGGCGGGCCCATGGAGAAGCTCACGCTGAGCTACGGTAAGGCGGGCCTCGATGGG
TTCGGGTACGGCTCCTTGCTAACCAAACAGGATCGTGCCAGTTTCCTACGCTTGGCTTCGTGGTCGATCGATATT
TCCGCGTCAAGAACTTTGTGCCCGAGCCCTTTTGGAGCATCAAGCTCACGCATACAAAGGAGGGTAAGACGGCCG
TCTTCAGCTGGGCGAGGAACCGTCTCTTCGATCGCACCACGACCGTCATTCTCTACGAGCGATGTCTTGCCGCCA
AAAAGGCAGTGGTGACGAGGGTTCAGGAGAAGCCGACGCGCAAGTTTAAGCCCTTGCCGCTCACGACGGTCGAGC
TGCAAAAGGCGGCCACTCGCCTGCTTCGCATGAACAGCCAGCGTGCCATGATCATCGCCGAGGGGCTCTATAACA
AGGGCTTCATCAGCTATCCCCGTACCGAGACGGATCGCTTCGACAAGGGCATCAACCTCAGGGCCCTGGTGCAGA
AACAGACGCCAAGTCAAGCATGGGGCAACTTTGCTCAGGGCCTGGTTGATGGCGCCTTTCAGCAGCCTCGAGCAG
GTAGACACGATGACAAGGCGCACCCTCCGATTCATCCCATTGCCTACGCGGCTCCGACGGTGCTCAGCGCCGAGG
AGGCGCCATTGTACGAGTACGTCGTTCGTCGCTTTCTTGCCTGCTGCGCAGACGACGCCAAAGGTATGGCGACGG
ATATAGATGTCGAGTACGGGGATGAAAACTTTCATGCCCGCGGCGTTGTCGTCCTGGAGAGGAATTATCTGGATG
TCTATGTATATGAGAGGTGGGATAACACGGCTGAGCTTCCCAGACTATCAAGGGGTGAGCAGTTTGAGCCGACGG
AAGCCATGATGACGGAAGGCAAGACGTCGCCGCCGAATTACCTGACGGAGGCGGACTTGATTGCGCTGATGGACG
CAAACGGCATCGGGACCGACGCCACCATGGCCGATCACATACAAAAGATTCAGGACCGAGAGTACGTGGCCGTCA
TAGACAGGGCCAGAAGCGGCGCGGGAGGCGATGAGGACGAGAACGGAGACGGCCCGGGGGCCCGAGAGGAGGCTC
CCGCCGGCCGTGGACGAGGAAGCGGGCGGGGCCGGCGAGGCGGACGGGGAGGCGCGGCATCGACCGGGAGGAGAG
GCGGCCAAAAGGTCTTTGTGCCGACTCAGCTCGGAGTGGCACTGATCCTGGGCTTCGATCGCATGAACTTTGAGA
CGAGTCTGGGGAAGCCGTTCCTACGCAAAGAGATGGAGCTCAAGATGAAGGCCATCTGCGAGGGCAACACGACCA
GGGACATTGTGCTGCGGGAGAGCATCTCTCAGTACAGGCATGTCTTTTTCCAGTCGCAAGAGAAGCTCGGGGTGC
TCCGTCAGGTGAGTTGATACGCGGAGGGCTGACGAGACGGAAGGGAGCTGATGAGGCTGTAGGCTTGTCGCGAGT
TTGTCTTTAGACAGCAGCCGCCGGACATATGATGAAGGGCCGGCACAAGTCGTTATCCGTCAGCGGTAAGACGGC
CCGAGACCAGACGGTGGCCGACAGCGAGGCGCGCGACAGAGACGGGTTTGCGGCCCGCACGCGGCTCTCAGCACG
AGGCGGTCGGATCCGCACGCAGCGACGAGCCCTAGACCGATACGGAAGGCCAGGTCAGCTCGGGTCCGGGGCGGC
CGAGATCGGGCGGGCGACGGCGTGCAGGATGGGCCTGATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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