Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4474
Gene name
LocationContig_412:11924..13158
Strand-
Gene length (bp)1234
Transcript length (bp)1071
Coding sequence length (bp)1071
Protein length (aa) 357

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 1.5E-36 68 319

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74507|YJD4_SCHPO Uncharacterized protein C594.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.04c PE=3 SV=2 3 324 4.0E-58

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

Domain # Start End Length
1 52 69 17
2 82 101 19
3 160 182 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4474
MILPVLKSLSDCADYKLTVEPFLPQLYALPARVSAIRSVQGLSQLYAQTNPLVSAFAISIVLGAVFLIASEINRN
YSQVDRFWSILPNLYVVHLAAWARLAGIPHGRVDLIAVFTTLWSCRLTFNYWRRGGYEIGSEDYRWEIVKSRTHP
LAFFVLNVTFISFIQSVLLFTISCLPAYVVLLSSRFQPEVSAADVGYFTIEVLLVLSEWISDGQQWNYQSAKRKY
QQDAKLPKGWHQADLDRGFITSGLWAYSRHPNFLAEQAIWFVLYNWACHATNTMYNWSGVGCASLILLFQGSTVL
TESITAGKYTEYAEYQRQVGMFMPLSLRGYQSNTYRPKVIKPSDAAKRQQESRKQK*
Coding >Ophun1|4474
ATGATCCTCCCCGTCCTCAAATCCCTCAGCGACTGCGCCGACTACAAGCTAACAGTCGAGCCCTTCCTCCCACAG
CTATACGCGCTGCCAGCCCGCGTGTCCGCCATCAGGAGCGTCCAGGGCCTCAGCCAGCTCTACGCCCAGACGAAC
CCGCTCGTGTCGGCCTTTGCCATCTCGATTGTACTGGGGGCCGTGTTTCTGATCGCGTCGGAGATTAATCGGAAT
TACTCGCAGGTTGATCGCTTCTGGAGCATCTTGCCGAACCTCTATGTTGTGCATTTGGCTGCTTGGGCTCGTCTT
GCTGGTATCCCCCATGGCCGCGTCGATCTGATTGCCGTCTTTACGACACTGTGGAGCTGCCGTTTGACCTTCAAC
TACTGGCGCAGAGGTGGCTACGAAATCGGCTCCGAAGACTACAGATGGGAAATCGTCAAGTCCAGGACTCATCCA
CTCGCCTTCTTCGTCCTCAACGTCACCTTCATCTCCTTCATCCAGAGCGTGCTGCTATTCACAATCTCTTGTCTC
CCCGCCTACGTCGTCCTGCTATCATCGCGCTTCCAGCCGGAAGTCTCAGCAGCCGATGTCGGCTACTTTACCATC
GAAGTCCTGCTCGTCCTCAGCGAATGGATCAGCGACGGCCAGCAGTGGAACTATCAGAGTGCGAAGCGCAAATAC
CAGCAAGACGCCAAGCTCCCCAAGGGCTGGCATCAGGCGGATCTCGACCGCGGCTTCATCACTTCGGGCCTGTGG
GCTTACAGCAGACACCCCAACTTTCTCGCCGAGCAGGCCATCTGGTTTGTCCTGTACAACTGGGCCTGCCACGCG
ACCAACACCATGTACAACTGGTCCGGCGTCGGCTGCGCGAGTCTGATTCTGCTGTTCCAGGGCTCCACGGTGTTG
ACCGAGTCCATCACGGCCGGAAAGTATACGGAATATGCCGAGTATCAGAGGCAAGTTGGCATGTTCATGCCCTTG
TCCCTGAGGGGATACCAGTCGAACACGTACAGGCCCAAGGTAATCAAACCCAGCGATGCGGCAAAGCGGCAGCAG
GAATCACGAAAGCAGAAGTAA
Transcript >Ophun1|4474
ATGATCCTCCCCGTCCTCAAATCCCTCAGCGACTGCGCCGACTACAAGCTAACAGTCGAGCCCTTCCTCCCACAG
CTATACGCGCTGCCAGCCCGCGTGTCCGCCATCAGGAGCGTCCAGGGCCTCAGCCAGCTCTACGCCCAGACGAAC
CCGCTCGTGTCGGCCTTTGCCATCTCGATTGTACTGGGGGCCGTGTTTCTGATCGCGTCGGAGATTAATCGGAAT
TACTCGCAGGTTGATCGCTTCTGGAGCATCTTGCCGAACCTCTATGTTGTGCATTTGGCTGCTTGGGCTCGTCTT
GCTGGTATCCCCCATGGCCGCGTCGATCTGATTGCCGTCTTTACGACACTGTGGAGCTGCCGTTTGACCTTCAAC
TACTGGCGCAGAGGTGGCTACGAAATCGGCTCCGAAGACTACAGATGGGAAATCGTCAAGTCCAGGACTCATCCA
CTCGCCTTCTTCGTCCTCAACGTCACCTTCATCTCCTTCATCCAGAGCGTGCTGCTATTCACAATCTCTTGTCTC
CCCGCCTACGTCGTCCTGCTATCATCGCGCTTCCAGCCGGAAGTCTCAGCAGCCGATGTCGGCTACTTTACCATC
GAAGTCCTGCTCGTCCTCAGCGAATGGATCAGCGACGGCCAGCAGTGGAACTATCAGAGTGCGAAGCGCAAATAC
CAGCAAGACGCCAAGCTCCCCAAGGGCTGGCATCAGGCGGATCTCGACCGCGGCTTCATCACTTCGGGCCTGTGG
GCTTACAGCAGACACCCCAACTTTCTCGCCGAGCAGGCCATCTGGTTTGTCCTGTACAACTGGGCCTGCCACGCG
ACCAACACCATGTACAACTGGTCCGGCGTCGGCTGCGCGAGTCTGATTCTGCTGTTCCAGGGCTCCACGGTGTTG
ACCGAGTCCATCACGGCCGGAAAGTATACGGAATATGCCGAGTATCAGAGGCAAGTTGGCATGTTCATGCCCTTG
TCCCTGAGGGGATACCAGTCGAACACGTACAGGCCCAAGGTAATCAAACCCAGCGATGCGGCAAAGCGGCAGCAG
GAATCACGAAAGCAGAAGTAA
Gene >Ophun1|4474
ATGATCCTCCCCGTCCTCAAATCCCTCAGCGACTGCGCCGACTACAAGCTAACAGTCGAGCCCTTCCTCCCACAG
CTATACGCGCTGCCAGCCCGCGTGTCCGCCATCAGGAGCGTCCAGGGCCTCAGCCAGCTCTACGCCCAGACGAAC
CCGCTCGTGTCGGCCTTTGCCATCTCGATTGTACTGGGGGCCGTGTTTCTGATCGCGTCGGAGATTAATCGGAAT
TACTCGCAGGTTGATCGCTTCTGGAGCATCTTGCCGAACCTCTATGTTGTGCATTTGGCTGCTTGGGCTCGTCTT
GCTGGTATCCCCCATGGCCGCGTCGATCTGATTGCCGTCTTTACGACACTGTGGAGCGTATGAATCTCCCTGTCC
ATCTATCGTCGGTCACGCTACTGAAAGCTGCTTCTCTAGTGCCGTTTGACCTTCAACTACTGGCGCAGAGGTGGC
TACGAAATCGGCTCCGAAGACTACAGATGGTGAGCAACAAACGTCTCTCCTCAAAGATCCTGTCTTGTAACACGA
AGGACCAGGGAAATCGTCAAGTCCAGGACTCATCCACTCGCCTTCTTCGTCCTCAACGTCACCTTCATCTCCTTC
ATCCAGAGCGTGCTGCTATTCACAATCTCTTGTCTCCCCGCCTACGTCGTCCTGCTATCATCGCGCTTCCAGCCG
GAAGTCTCAGCAGCCGATGTCGGCTACTTTACCATCGAAGTCCTGCTCGTCCTCAGCGAATGGATCAGCGACGGC
CAGCAGTGGAGTACGCCCTGCCACTTCCTGACTCTACGATAAGACACTAACCCCTTCCGCAGACTATCAGAGTGC
GAAGCGCAAATACCAGCAAGACGCCAAGCTCCCCAAGGGCTGGCATCAGGCGGATCTCGACCGCGGCTTCATCAC
TTCGGGCCTGTGGGCTTACAGCAGACACCCCAACTTTCTCGCCGAGCAGGCCATCTGGTTTGTCCTGTACAACTG
GGCCTGCCACGCGACCAACACCATGTACAACTGGTCCGGCGTCGGCTGCGCGAGTCTGATTCTGCTGTTCCAGGG
CTCCACGGTGTTGACCGAGTCCATCACGGCCGGAAAGTATACGGAATATGCCGAGTATCAGAGGCAAGTTGGCAT
GTTCATGCCCTTGTCCCTGAGGGGATACCAGTCGAACACGTACAGGCCCAAGGTAATCAAACCCAGCGATGCGGC
AAAGCGGCAGCAGGAATCACGAAAGCAGAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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