Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|4293
Gene name
LocationContig_397:8211..9158
Strand-
Gene length (bp)947
Transcript length (bp)876
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10173 Mit_KHE1 Mitochondrial K+-H+ exchange-related 1.1E-58 2 188

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13942|YEPC_SCHPO Uncharacterized protein C23H3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.12c PE=4 SV=1 1 203 4.0E-15
sp|P48569|YD183_YEAST Uncharacterized protein YDL183C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL183C PE=4 SV=1 1 260 4.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 146 168 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|4293
MRIYLLPVSTRRSLLYAQRLDSSPKSSSSSSSSSSNPPRRSLVDRGTAFAARTWTRWEKQPSGWQRRVVDYGNQA
LRRIPFEEWGLKSVPPLSGRRREDEQTGRVRVELVFPGGSFGPDEARALALRLATERLGLHRQRFLWCFAAMPLT
LPFALVPIIPNLPFFYLVYRAWSHWRAIAGGRHLQWLVETKLLHSAPSAKLSQLYASSPPLSRQPEGDREALLLT
QKQVRSFCEALDVPALEVELERAVSQVQKALDESRSGSGTQPEAGPAGSQESKTRKSSARRREENK*
Coding >Ophun1|4293
ATGCGCATCTATCTCCTCCCCGTGTCAACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCAAA
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCCCGCCGCAGCCTCGTCGACCGCGGCACCGCCTTCGCC
GCCCGCACATGGACGCGCTGGGAGAAACAGCCATCAGGCTGGCAGCGCCGCGTCGTCGACTACGGGAACCAGGCG
CTGCGGCGGATCCCTTTTGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCGGGGCGGAGACGAGAGGATGAG
CAGACTGGCAGGGTCCGCGTCGAACTCGTCTTTCCAGGCGGTTCCTTCGGCCCGGATGAGGCTCGCGCCTTGGCC
TTGAGGCTGGCTACAGAGAGGCTTGGTCTGCATCGACAGCGCTTCCTCTGGTGCTTTGCTGCCATGCCTCTCACT
CTACCCTTTGCTCTCGTCCCCATCATCCCCAACCTACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGG
CGCGCCATCGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACAAAACTCCTCCATTCAGCCCCCTCCGCCAAG
CTGAGCCAGCTCTATGCCAGCAGCCCACCCCTATCCCGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACG
CAGAAGCAGGTTCGTAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAAGTGGAACTTGAACGAGCCGTCTCC
CAAGTTCAAAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGGACACAGCCCGAGGCGGGACCAGCTGGCAGCCAG
GAGTCAAAGACACGGAAATCGTCTGCGCGGCGCCGGGAGGAGAACAAGTAG
Transcript >Ophun1|4293
ATGCGCATCTATCTCCTCCCCGTGTCAACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCAAA
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCCCGCCGCAGCCTCGTCGACCGCGGCACCGCCTTCGCC
GCCCGCACATGGACGCGCTGGGAGAAACAGCCATCAGGCTGGCAGCGCCGCGTCGTCGACTACGGGAACCAGGCG
CTGCGGCGGATCCCTTTTGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCGGGGCGGAGACGAGAGGATGAG
CAGACTGGCAGGGTCCGCGTCGAACTCGTCTTTCCAGGCGGTTCCTTCGGCCCGGATGAGGCTCGCGCCTTGGCC
TTGAGGCTGGCTACAGAGAGGCTTGGTCTGCATCGACAGCGCTTCCTCTGGTGCTTTGCTGCCATGCCTCTCACT
CTACCCTTTGCTCTCGTCCCCATCATCCCCAACCTACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGG
CGCGCCATCGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACAAAACTCCTCCATTCAGCCCCCTCCGCCAAG
CTGAGCCAGCTCTATGCCAGCAGCCCACCCCTATCCCGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACG
CAGAAGCAGGTTCGTAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAAGTGGAACTTGAACGAGCCGTCTCC
CAAGTTCAAAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGGACACAGCCCGAGGCGGGACCAGCTGGCAGCCAG
GAGTCAAAGACACGGAAATCGTCTGCGCGGCGCCGGGAGGAGAACAAGTAG
Gene >Ophun1|4293
ATGCGCATCTATCTCCTCCCCGTGTCAACGCGACGCAGCCTCCTCTACGCCCAACGCCTCGACAGCTCCCCCAAA
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCCCGCCGCAGCCTCGTCGACCGCGGCACCGCCTTCGCC
GCCCGCACATGGACGCGCTGGGAGAAACAGCCATCAGGCTGGCAGCGCCGCGTCGTCGACTACGGGAACCAGGCG
CTGCGGCGGATCCCTTTTGAGGAATGGGGCCTCAAGTCTGTGCCGCCGCTGTCGGGGCGGAGACGAGAGGATGAG
CAGACTGGCAGGGTCCGCGTCGAACTCGTCTTTCCAGGCGGTTCCTTCGGCCCGGATGAGGCTCGCGCCTTGGCC
TTGAGGCTGGCTACAGAGAGGCTTGGTCTGCATCGACAGCGCTTCCTCTGGTGCTTTGCTGCCATGCCTCTCACT
CTACCCTTTGCTCTCGTCCCCATGTACGTAATCTCGCCCCCCCCCCTTTTCCTCGTCTCTCATGAAATGCCAACT
AACTCCTCTTCTCGCATAGCATCCCCAACCTACCCTTCTTCTACCTCGTCTACCGCGCCTGGTCTCACTGGCGCG
CCATCGCCGGCGGCCGCCATCTGCAATGGCTTGTCGAAACAAAACTCCTCCATTCAGCCCCCTCCGCCAAGCTGA
GCCAGCTCTATGCCAGCAGCCCACCCCTATCCCGGCAACCAGAGGGGGACCGAGAAGCGCTGTTGTTGACGCAGA
AGCAGGTTCGTAGCTTCTGCGAAGCCCTCGACGTCCCGGCTCTAGAAGTGGAACTTGAACGAGCCGTCTCCCAAG
TTCAAAAGGCCTTGGACGAGAGCCGCTCCGGGTCCGGGACACAGCCCGAGGCGGGACCAGCTGGCAGCCAGGAGT
CAAAGACACGGAAATCGTCTGCGCGGCGCCGGGAGGAGAACAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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